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Receptor
PDB id Resolution Class Description Source Keywords
4U7W 1.9 Å NON-ENZYME: OTHER THE CRYSTAL STRUCTURE OF THE TERMINAL R DOMAIN FROM THE MYXA NRPS BIOSYNTHETIC PATHWAY STIGMATELLA AURANTIACA REDUCTASE THIOESTERASE ROSSMANN FOLD POLYKETIDE NON-RIBOPEPTIDE POLYKETIDE SYNTHASE NON-RIBOSOMAL PEPTIDE SYNTHETSHORT-CHAIN DEHYDROGENASES OXIDOREDUCTASE
Ref.: COMPREHENSIVE STRUCTURAL AND BIOCHEMICAL ANALYSIS O TERMINAL MYXALAMID REDUCTASE DOMAIN FOR THE ENGINEE PRODUCTION OF PRIMARY ALCOHOLS. CHEM.BIOL. V. 22 1018 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NDP B:1601;
A:1601;
Valid;
Valid;
none;
none;
Kd = 45 uM
745.421 C21 H30 N7 O17 P3 c1nc(...
ACT B:1602;
A:1602;
Invalid;
Invalid;
none;
none;
submit data
59.044 C2 H3 O2 CC(=O...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4U7W 1.9 Å NON-ENZYME: OTHER THE CRYSTAL STRUCTURE OF THE TERMINAL R DOMAIN FROM THE MYXA NRPS BIOSYNTHETIC PATHWAY STIGMATELLA AURANTIACA REDUCTASE THIOESTERASE ROSSMANN FOLD POLYKETIDE NON-RIBOPEPTIDE POLYKETIDE SYNTHASE NON-RIBOSOMAL PEPTIDE SYNTHETSHORT-CHAIN DEHYDROGENASES OXIDOREDUCTASE
Ref.: COMPREHENSIVE STRUCTURAL AND BIOCHEMICAL ANALYSIS O TERMINAL MYXALAMID REDUCTASE DOMAIN FOR THE ENGINEE PRODUCTION OF PRIMARY ALCOHOLS. CHEM.BIOL. V. 22 1018 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4U7W Kd = 45 uM NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4U7W Kd = 45 uM NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4U7W Kd = 45 uM NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NDP; Similar ligands found: 172
No: Ligand ECFP6 Tc MDL keys Tc
1 NDP 1 1
2 0WD 0.827273 1
3 NAI 0.803738 0.986842
4 NMN AMP PO4 0.794643 0.948052
5 NPW 0.692308 0.962025
6 NZQ 0.686441 0.987013
7 1DG 0.68 1
8 DG1 0.68 1
9 A2R 0.650943 0.909091
10 A22 0.64486 0.934211
11 TXP 0.644628 0.924051
12 ATR 0.640777 0.894737
13 NA7 0.636364 0.886076
14 XNP 0.620968 0.949367
15 AP0 0.598361 0.948718
16 A2P 0.598039 0.881579
17 NJP 0.574803 0.923077
18 25L 0.550847 0.934211
19 ODP 0.550388 0.936709
20 NAX 0.544 0.949367
21 25A 0.53913 0.921053
22 80F 0.537879 0.914634
23 2AM 0.529412 0.87013
24 6V0 0.519685 0.974026
25 NAP 0.514493 0.922078
26 7L1 0.507143 0.763441
27 EAD 0.507143 0.949367
28 A2D 0.504673 0.921053
29 TXE 0.503876 0.935897
30 NA0 0.496454 0.910256
31 TXD 0.496124 0.911392
32 SAP 0.495575 0.875
33 AGS 0.495575 0.875
34 P1H 0.493056 0.925926
35 CO7 0.489796 0.791209
36 TAP 0.489362 0.864198
37 PAP 0.482456 0.907895
38 BA3 0.481818 0.921053
39 NAJ PZO 0.478261 0.924051
40 ATP 0.477876 0.921053
41 HEJ 0.477876 0.921053
42 B4P 0.477477 0.921053
43 AP5 0.477477 0.921053
44 ADP 0.477477 0.921053
45 OAD 0.47541 0.897436
46 AR6 0.473684 0.896104
47 AQP 0.473684 0.921053
48 5FA 0.473684 0.921053
49 APR 0.473684 0.896104
50 AN2 0.473214 0.909091
51 3OD 0.467742 0.897436
52 50T 0.464912 0.884615
53 NAJ PYZ 0.464789 0.879518
54 9X8 0.463415 0.851852
55 PO4 PO4 A A A A PO4 0.463415 0.857143
56 V3L 0.461538 0.896104
57 2A5 0.46087 0.85
58 AT4 0.460177 0.886076
59 A1R 0.459016 0.841463
60 4AD 0.459016 0.875
61 ADQ 0.459016 0.897436
62 OVE 0.458716 0.8375
63 OMR 0.458647 0.813953
64 PPS 0.457627 0.811765
65 AD9 0.456897 0.897436
66 CA0 0.45614 0.897436
67 M33 0.45614 0.884615
68 ADJ 0.455882 0.879518
69 A3P 0.455357 0.894737
70 ACP 0.452174 0.897436
71 ENP 0.451613 0.85
72 UP5 0.451128 0.948052
73 SRP 0.45 0.8625
74 ANP 0.449153 0.897436
75 ACQ 0.449153 0.897436
76 PRX 0.448276 0.82716
77 A3R 0.447154 0.841463
78 5AL 0.445378 0.884615
79 7D4 0.443478 0.8375
80 ADX 0.443478 0.811765
81 6YZ 0.438017 0.897436
82 A 0.436364 0.894737
83 AMP 0.436364 0.894737
84 4TC 0.433824 0.924051
85 7D3 0.433628 0.8375
86 DCA 0.433566 0.788889
87 ETB 0.433566 0.797753
88 BIS 0.433071 0.864198
89 1ZZ 0.433071 0.802326
90 00A 0.432 0.864198
91 ATF 0.429752 0.886076
92 DQV 0.428571 0.934211
93 0T1 0.427586 0.788889
94 5SV 0.427419 0.788235
95 8QN 0.427419 0.884615
96 3AM 0.427273 0.857143
97 N01 0.426573 0.884615
98 PR8 0.425197 0.811765
99 LAD 0.425197 0.821429
100 WAQ 0.425197 0.841463
101 DTP 0.425 0.8375
102 AMO 0.424 0.886076
103 PAJ 0.424 0.843373
104 APC 0.423729 0.886076
105 UPA 0.423358 0.935897
106 48N 0.422222 0.853659
107 FYA 0.421875 0.860759
108 PTJ 0.421875 0.853659
109 CNA 0.421429 0.910256
110 PUA 0.42069 0.9125
111 DND 0.419118 0.910256
112 NXX 0.419118 0.910256
113 AV2 0.418033 0.848101
114 COA 0.417808 0.788889
115 3UK 0.417323 0.897436
116 OOB 0.416 0.909091
117 IVC 0.415584 0.78022
118 DAT 0.415254 0.8375
119 NDO 0.414966 0.897436
120 139 0.414286 0.901235
121 B5V 0.414062 0.886076
122 T99 0.413223 0.886076
123 TAT 0.413223 0.886076
124 3AT 0.413223 0.896104
125 YLB 0.413043 0.784091
126 62F 0.4125 0.823529
127 ABM 0.412281 0.848101
128 B5M 0.412214 0.875
129 YAP 0.412214 0.875
130 YLP 0.411765 0.784091
131 NB8 0.410853 0.853659
132 ME8 0.410853 0.802326
133 SON 0.410256 0.886076
134 DLL 0.409449 0.909091
135 AHX 0.409449 0.853659
136 CAO 0.409396 0.763441
137 30N 0.409396 0.72449
138 AMX 0.409396 0.797753
139 COS 0.409396 0.771739
140 7D5 0.409091 0.8125
141 4UW 0.408759 0.9125
142 F2R 0.408451 0.825581
143 APX 0.407692 0.841463
144 SRA 0.40708 0.85
145 CMX 0.406667 0.788889
146 SCO 0.406667 0.788889
147 TYM 0.405797 0.886076
148 COD 0.405594 0.777778
149 CA6 0.405229 0.70297
150 OXK 0.405229 0.771739
151 AP2 0.405172 0.886076
152 A12 0.405172 0.886076
153 9SN 0.40458 0.853659
154 LAQ 0.404412 0.802326
155 T5A 0.404255 0.914634
156 FAM 0.403974 0.771739
157 ACO 0.403974 0.763441
158 FCX 0.403974 0.763441
159 VO4 ADP 0.403226 0.860759
160 ADP VO4 0.403226 0.860759
161 YLC 0.402878 0.823529
162 1VU 0.402597 0.763441
163 B5Y 0.401515 0.875
164 FA5 0.401515 0.886076
165 HAX 0.401316 0.771739
166 AR6 AR6 0.4 0.871795
167 CAJ 0.4 0.771739
168 AFH 0.4 0.843373
169 APU 0.4 0.923077
170 A U 0.4 0.898734
171 TXA 0.4 0.886076
172 4UU 0.4 0.948052
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4U7W; Ligand: NDP; Similar sites found with APoc: 610
This union binding pocket(no: 1) in the query (biounit: 4u7w.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 1LDM NAD 0.607903
2 5L53 NAP 1.23457
3 3CL7 HYN 1.2987
4 1YB5 NAP 1.4245
5 1MUU NAD 1.42857
6 1MV8 NAD 1.42857
7 5EJ2 NAD 1.62338
8 1KC7 PPR 1.66667
9 1H9A NAP 1.66667
10 5M67 3D1 1.66667
11 5M67 NAD 1.66667
12 5M67 ADE 1.66667
13 1FP2 SAH 1.70455
14 3B1F NAD 1.72414
15 1LUA NAP 1.74216
16 2F1K NAP 1.79211
17 6CEP NAD 1.79641
18 6CEP OXM 1.79641
19 2JHF NAD 1.87166
20 3OIG NAD 1.8797
21 1V8B NAD 1.90476
22 2YRX AMP 1.90476
23 1V59 FAD 1.90476
24 2V6G NAP 1.92308
25 5YSS NAD 1.95312
26 5LD5 NAD 1.95531
27 3RJ5 NAD 1.9685
28 1Q0H NDP 1.97044
29 1Q0H FOM 1.97044
30 1TI7 NAP 1.98864
31 1DLJ UGA 1.99005
32 1DLJ NAI 1.99005
33 2VN9 GVD 1.99336
34 5T2U NAP 2.01613
35 3NUG NAD 2.02429
36 3B20 NAD 2.0649
37 5A04 NDP 2.0649
38 5A04 BGC 2.0649
39 3B1J NAD 2.0649
40 4YAG NAI 2.07612
41 4B7X NAP 2.08333
42 4E5N NAD 2.12121
43 2VHW NAI 2.12202
44 2CDU ADP 2.14286
45 3OND ADN 2.14286
46 3OND NAD 2.14286
47 5JWC FAD 2.14286
48 3ULK NDP 2.14286
49 4K26 NDP 2.17391
50 4K26 SFF 2.17391
51 5V6F MAN BMA MAN 2.17391
52 1EZ4 NAD 2.20126
53 1DRJ RIP 2.21402
54 5LNW HG3 2.21519
55 5JAQ NAI 2.21675
56 1H2B NAJ 2.22841
57 3T7S SAM 2.23881
58 1IY8 NAD 2.24719
59 3EB9 FLC 2.25564
60 3GFB NAD 2.28571
61 2NAD NAD 2.29008
62 3LST SAH 2.29885
63 3TWO NDP 2.29885
64 4JGP PYR 2.30415
65 2DFV NAD 2.30548
66 1NFQ NAI 2.30769
67 5OJI NAP 2.30769
68 5OJI ISN 2.30769
69 1O6Z NAD 2.31023
70 1W73 NAP 2.31788
71 1W8D NAP 2.31788
72 5Z20 NAI 2.31884
73 5FYR INS 2.34899
74 1JAY NAP 2.35849
75 5C9P FUC 2.3622
76 2IXB NAD 2.38095
77 2IXB A2G 2.38095
78 2DBZ NAP 2.39521
79 1J49 NAD 2.4024
80 2GCG NDP 2.42424
81 2VDV SAM 2.43902
82 3CH6 311 2.44755
83 3CH6 NAP 2.44755
84 1ZQ9 SAM 2.45614
85 4DYG NAG NAG NAG NAG 2.45902
86 5TWJ SAM 2.46914
87 1SAY PYR 2.49307
88 1HKU NAD 2.51397
89 1LDN NAD 2.53165
90 2HK9 ATR 2.54545
91 5AYV NAP 2.589
92 1H6C NDP 2.61905
93 3NJ4 NAD 2.61905
94 3NJ4 AFX 2.61905
95 5XHA FRU 2.61905
96 1H6C SIN 2.61905
97 6C4N NAP 2.61905
98 4Y9D NAI 2.62295
99 1ZEM NAD 2.67176
100 5AOV NAP 2.67857
101 5OJL TXP 2.68456
102 4MDH NAD 2.69461
103 5MDH NAD 2.7027
104 2DM6 IMN 2.7027
105 2DM6 NAP 2.7027
106 3OJF NDP 2.72374
107 3OJF IMJ 2.72374
108 3K5I AIR 2.72953
109 1NE7 AGP 2.76817
110 1RYD NDP 2.84238
111 1B8U NAD 2.85714
112 1E5Q NDP 2.85714
113 4N4J HG1 2.85714
114 6C4T NA7 2.85714
115 3G5N PB2 2.85714
116 1B8U OAA 2.85714
117 5YAP NAI 2.89474
118 5YAP 8S0 2.89474
119 2WA2 SAM 2.89855
120 2C5A NAD 2.90237
121 2C5A GDC 2.90237
122 3EVG SAH 2.90909
123 1HYH NAD 2.91262
124 1DRV A3D 2.9304
125 4RF2 NAP 2.94118
126 6F9Q NAD 2.94118
127 1XDS SAM 2.94118
128 1QZZ SAM 2.94118
129 5CG1 NAD BBN 2.95082
130 3WBF API 2.95082
131 3V1Y NAD 2.96736
132 1RM4 NDP 2.96736
133 5OVL NAP 3
134 6BII NAP 3.003
135 2VYN NAD 3.02115
136 1GAD NAD 3.0303
137 2CVQ NDP 3.0581
138 2WYV NAD 3.06513
139 5B4T 3HR 3.07692
140 5B4T NAD 3.07692
141 1RKX NAD 3.08123
142 5H81 NAP 3.08483
143 1X87 NAD 3.0853
144 1U7Z PMT 3.09735
145 4ZGS NAD 3.10881
146 3I27 SID 3.125
147 5WUW NAP 3.13589
148 3ZV6 NAD 3.20285
149 3ZV6 4HB 3.20285
150 1O5I NAD 3.21285
151 3G89 SAM 3.21285
152 1UXG FUM 3.23625
153 1UXG NAD 3.23625
154 1BDB NAD 3.2491
155 6F5W KG1 3.25203
156 5N6C NAD 3.33333
157 1RYO OXL 3.33333
158 5ZYN FAD 3.33333
159 4DPL NAP 3.34262
160 3AY6 NAI 3.34572
161 3AY6 BGC 3.34572
162 2PV7 NAD 3.3557
163 1ZBQ NAD 3.36391
164 1D7O TCL 3.367
165 1D7O NAD 3.367
166 5U5G NAP 3.38983
167 4YCA NDP 3.40136
168 3ENV ABF 3.40426
169 2I3G NAP 3.40909
170 5GT9 NAP 3.42205
171 1GZ6 NAI 3.44828
172 1QG6 NAD 3.44828
173 1QG6 TCL 3.44828
174 1ORR NAD 3.45821
175 4W6Z 8ID 3.45821
176 2ZAT NAP 3.46154
177 5A1T NAI 3.51906
178 5A1T OXM 3.51906
179 4OB6 S2T 3.51906
180 3GCZ SAM 3.5461
181 4D3F NAP 3.54839
182 4OM8 NAD 3.55987
183 6CI9 NAP 3.57143
184 1PJS NAD 3.57143
185 2ZJ1 ARJ 3.57143
186 2ZJ1 NAD 3.57143
187 1CER NAD 3.57143
188 4XYB NDP 3.58056
189 4FC7 NAP 3.61011
190 4FC7 COA 3.61011
191 1PZG A3D 3.62538
192 3A4T SFG 3.64964
193 1BW9 NAD 3.65169
194 2CUN 3PG 3.65854
195 1C1X NAD 3.66197
196 5HV7 RBL 3.66972
197 6EL3 NAP 3.67454
198 2GDZ NAD 3.74532
199 4FZV SAM 3.76569
200 1WP4 NDP 3.80623
201 4PIV NDP 3.80952
202 1SQF SAM 3.80952
203 2NU8 COA 3.81944
204 3ABI NAD 3.83562
205 3VPH NAD 3.87097
206 3VPH OXM 3.87097
207 1DSS NAD 3.9039
208 3ICT ADP 3.91156
209 3ICS ADP 3.91156
210 1ZK4 AC0 3.98406
211 1ZK4 NAP 3.98406
212 4R5M NAP 3.98936
213 4R5M 4NO 3.98936
214 5O42 NAD 4.0146
215 5O42 BGC 4.0146
216 5O42 9JW 4.0146
217 4URF NAD 4.03226
218 4XQC NAD 4.04762
219 4XQC 13D 4.04762
220 2O4C NAD 4.04762
221 1RM0 D6P 4.04762
222 6ER9 FAD 4.04762
223 5A1S FLC 4.04762
224 1RM0 NAI 4.04762
225 2QZZ NAP 4.08805
226 2QZZ EMF 4.08805
227 1PR9 NAP 4.09836
228 3D3W NAP 4.09836
229 2GZ3 NAP 4.09836
230 5BW4 SAM 4.11985
231 1UAY ADN 4.13223
232 1KEW NAD 4.15512
233 1KEW TYD 4.15512
234 4OSP NAP 4.18251
235 3CMC NAD 4.19162
236 3KB6 NAD 4.19162
237 5YLF BGC 4.19162
238 4PLG NAI 4.19162
239 4PLG OXM 4.19162
240 1N7G GDR 4.19948
241 1N7G NDP 4.19948
242 2B5W NAP 4.20168
243 1ZGA SAH 4.20168
244 1PL6 NAD 4.21348
245 4ZVV NAD 4.21687
246 4ZVV GN0 4.21687
247 9LDB NAD 4.21687
248 9LDT NAD 4.21687
249 2DC1 NAD 4.23729
250 2DC1 CIT 4.23729
251 1V35 NAI 4.25532
252 1NXJ TLA 4.28571
253 1J5P NAD 4.34783
254 1Y1P NMN AMP PO4 4.38596
255 3QWI NAP 4.44444
256 3QWI CUE 4.44444
257 5OCM NAP 4.46735
258 1BXK NAD 4.50704
259 3A06 NDP 4.52128
260 4J1Q NDP 4.52381
261 4O0L NDP 4.52381
262 3I9U DTU 4.56274
263 1SOW NAD 4.57317
264 2VT3 ATP 4.65116
265 1FK8 NAD 4.66926
266 3WLE NAD 4.69208
267 1VBO MAN MAN MAN 4.69799
268 1LTH NAD 4.70219
269 1QH9 LAC 4.74138
270 4KOA NDP 4.8048
271 1VM6 NAD 4.82456
272 1FP1 SAH 4.83871
273 3HRD NIO 4.84848
274 1JJV ATP 4.85437
275 2HMT NAI 4.86111
276 3HAD NAD 4.87013
277 5G4L NDP 4.8951
278 5O96 SAM 4.89796
279 3GU3 SAH 4.92958
280 5IN4 GDP 4.94506
281 5IN4 6CK 4.94506
282 5IN4 NAP 4.94506
283 4E13 NAD 4.947
284 1YJQ NAP 4.9505
285 5UAV TFB 4.96894
286 5UAV NDP 4.96894
287 2PK3 A2R 4.98442
288 3V1U NAD 5
289 1LSS NAD 5
290 3A28 NAD 5.03876
291 2C29 NAP 5.04451
292 2C29 DQH 5.04451
293 4GKV NAD 5.05952
294 6FDF SAH 5.08982
295 5NUF NAD 5.12048
296 5NUE NAD 5.12048
297 5T9E NAP 5.16605
298 3HB5 NAP 5.19878
299 2GSD NAD 5.22388
300 1LLU NAD 5.26316
301 1G0N NDP 5.30035
302 1G0N PHH 5.30035
303 5JY6 NAD 5.33708
304 3RKR NAP 5.34351
305 1XKQ NDP 5.35714
306 1XG5 NAP 5.37634
307 1XHL NDP 5.38721
308 5XWV NDP 5.44355
309 5XWV 8H6 5.44355
310 4OOE FOM 5.44554
311 4OOE NDP 5.44554
312 1GEG NAD 5.46875
313 4EUE NAI 5.47619
314 2G2Y MLI 5.51948
315 5T9F TYR 5.53506
316 5T9F NAP 5.53506
317 5EIN NAP 5.55556
318 4YEE 4CQ 5.55556
319 1H3F TYE 5.55556
320 3CIF G3H 5.57103
321 3CIF NAD 5.57103
322 1WDK NAD 5.64103
323 2JAP NDP 5.66802
324 2JAH NDP 5.66802
325 2AG5 NAD 5.69106
326 2G5C NAD 5.69395
327 3BAZ NAP 5.70571
328 1GTE FAD 5.71429
329 1KYZ SAH 5.75342
330 2BGM NAJ 5.7554
331 5I7S NAD 5.7971
332 5I7S E9P 5.7971
333 2PD4 DCN 5.81818
334 2PD4 NAD 5.81818
335 4NBT NAD 5.83333
336 1U1I NAD 5.86735
337 5F5N NAD 5.88235
338 1A27 NAP 5.88235
339 5YEC ATP 5.88235
340 4ITU NAI 5.94796
341 4ITU 1HS 5.94796
342 2CUL FAD 5.95238
343 1A5Z NAD 5.95611
344 2CFC NAD 6
345 1J0X NAD 6.0241
346 4Q9N NAI 6.04027
347 3GGO NAI 6.05096
348 3GGO ENO 6.05096
349 5CAE COA 6.07029
350 5CAE SIN 6.07029
351 1UZN NAP 6.07287
352 5Y1G NAD 6.09756
353 5Y1G AKB 6.09756
354 1NNU NAD 6.11354
355 1NNU TCT 6.11354
356 1C3M MAN MAN 6.12245
357 3H8V ATP 6.16438
358 1OAA OAA 6.17761
359 4HE2 AMP 6.19048
360 5XVH NAP 6.20915
361 3VZS NAP 6.22568
362 3VZS CAA 6.22568
363 6AA8 NAD 6.29139
364 2WSB NAD 6.29921
365 1Z6Z NAP 6.38298
366 1RL4 BRR 6.38298
367 1HYE NAP 6.38978
368 1EBF NAD 6.42458
369 5Z21 NAI 6.42458
370 4Z0H NAD 6.42857
371 1GV0 NAD 6.45161
372 1GUZ NAD 6.45161
373 1VL0 NAI 6.50685
374 4JEJ 1GP 6.55738
375 1RPN NDP 6.56716
376 5L4L NAP 6.57895
377 5L4L 7OX 6.57895
378 3KIF GDL 6.60377
379 2ZL4 ALA ALA ALA ALA 6.63265
380 4KWI NAP 6.66667
381 4KWI 1TJ 6.66667
382 4O1M NAD 6.66667
383 1UWK URO 6.66667
384 1UWK NAD 6.66667
385 1XXR MAN 6.66667
386 1F8G NAD 6.66667
387 1XSE NDP 6.77966
388 5Z2F NAP 6.79245
389 5U5N NAD 6.81004
390 1GR0 NAD 6.81199
391 2DTX BMA 6.81818
392 1T26 GBD 6.8323
393 1T26 NAI 6.8323
394 3O03 NAP 6.87285
395 5EES NAP 6.88259
396 2B4Q NAP 6.88406
397 1X1T NAD 6.90476
398 4OHU NAD 6.92042
399 4OHU 2TK 6.92042
400 1KYQ NAD 6.93431
401 3H4V DVP 6.94444
402 3H4V NAP 6.94444
403 4J7U YTZ 6.94444
404 4J7U NAP 6.94444
405 1HDR NAD 6.96721
406 2VUT NAD 6.97674
407 4NBW NAD 7.00389
408 2DKN NAI 7.05882
409 2BOI MFU 7.07965
410 2XZ9 PYR 7.09877
411 1SNY NAP 7.11611
412 3U4C NDP 7.11744
413 3WMX NAD 7.14286
414 1H5Q NAP 7.16981
415 5THQ NDP 7.35294
416 5KKA 6V0 7.37179
417 4YAC NAI 7.40741
418 3QV1 NAD 7.4184
419 2Q2V NAD 7.45098
420 3SJU NDP 7.52688
421 3SJ7 NDP 7.53968
422 5N0L ILE 7.54717
423 1OFU GDP 7.56302
424 4D79 ATP 7.6087
425 1AE1 NAP 7.69231
426 2AE2 NAP 7.69231
427 2AE2 PTO 7.69231
428 5LX9 OLB 7.74648
429 1Q7B NAP 7.78689
430 5XNC MTA 7.81671
431 2B4R NAD 7.82609
432 2WD7 NAP 7.83582
433 2WD7 VGD 7.83582
434 2VZ0 NAP 7.83582
435 2VZ0 D64 7.83582
436 6DNT NAD 7.84884
437 5BN3 ADP 7.85714
438 4FN4 NAD 7.87402
439 5JE8 NAD 7.94702
440 3ORF NAD 7.96813
441 1MXH DHF 7.97101
442 1MXH NAP 7.97101
443 3JQA NAP 7.98611
444 3BMO NAP 7.98611
445 4CM4 NAP 7.98611
446 3BMQ NAP 7.98611
447 3JQG NAP 7.98611
448 4CM8 NAP 7.98611
449 5JDI NAP 7.98611
450 3JQF NAP 7.98611
451 3JQ8 NAP 7.98611
452 3JQ9 NAP 7.98611
453 3JQB NAP 7.98611
454 4CLR NAP 7.98611
455 5JDC NAP 7.98611
456 4CLO NAP 7.98611
457 4CMI NAP 7.98611
458 5JCJ NAP 7.98611
459 5K6A NAP 7.98611
460 3JQ7 NAP 7.98611
461 4CM9 NAP 7.98611
462 4CME NAP 7.98611
463 3BMN NAP 7.98611
464 3JQA DX4 7.98611
465 3JQF AX2 7.98611
466 4CLR FDB 7.98611
467 3JQB DX6 7.98611
468 3BMN AX3 7.98611
469 4CME KTZ 7.98611
470 4CM8 IZ9 7.98611
471 3JQG AX6 7.98611
472 3BMQ AX5 7.98611
473 4CLO XP0 7.98611
474 4RDH AMP 7.98611
475 3JQ7 DX2 7.98611
476 1EDO NAP 8.19672
477 4CQM NAP 8.19672
478 2RH4 EMO 8.30325
479 3I6I NDP 8.3815
480 5EPO NAP 8.39695
481 4NBU NAI 8.4
482 5Z2L NDP 8.57143
483 5N2I NAP 8.62069
484 1FS5 TLA 8.64662
485 3C1O NAP 8.72274
486 5L4S 6KX 8.80503
487 5L4S NAP 8.80503
488 1UDB UFG 8.87574
489 1UDB NAD 8.87574
490 1VL8 NAP 8.98876
491 1HDC CBO 9.05512
492 4NFE BEN 9.2827
493 3O26 NDP 9.32476
494 1TB4 PEJ 9.43396
495 5UR0 NAD 9.45559
496 1HSL HIS 9.66387
497 2D2I NAP 9.73684
498 5O98 NAP 9.7619
499 1SC6 NAD 9.7619
500 2Q1S NAI 9.81432
501 4ZA2 NAD 9.88142
502 4ZRN NAD 9.9359
503 4ZRN UPG 9.9359
504 2A92 NAI 9.96885
505 5H5O PCG 10.0775
506 5OOH 9ZZ 10.1942
507 5OOH NAP 10.1942
508 1W6U NAP 10.2649
509 2BKA NDP 10.3306
510 2HJR APR 10.3659
511 6FLZ MMA 10.4167
512 1O5E 132 10.5263
513 6A0S HSE 10.5422
514 6A0S NDP 10.5422
515 1E7S NAP 10.5919
516 5MIT FAD 10.7034
517 5MIT NAP 10.7034
518 1E3W NAD 10.728
519 1E6W NAD 10.7692
520 2EWM NAD 10.8434
521 5DF1 NAP 10.8696
522 5DF1 58X 10.8696
523 5MLR NAP 10.9489
524 5MLR GRQ 10.9489
525 3AB4 THR 10.9524
526 4XB2 NDP 11.3433
527 4XB2 HSE 11.3433
528 4BVA NDP 11.3433
529 2DT5 NAD 11.3744
530 5ZZ6 ADP 11.5385
531 5ZZ6 NAD 11.5385
532 1YXM ADE 11.5512
533 5ZI2 ADP 11.6667
534 5ZI2 NAD 11.6667
535 2PEL LAT 11.8644
536 2PEL LBT 11.8644
537 2YVJ NAI 11.9266
538 4PLT OXM 12.0846
539 4PLT NAI 12.0846
540 1U7T NAD 12.2605
541 1U7T TDT 12.2605
542 5OVK NDP 12.5
543 2JL1 NAP 12.5436
544 4PVD NDP 12.5731
545 5GWT NAD 12.5899
546 5GWT SIN 12.5899
547 5K4W NAI 12.7726
548 5K4W THR 12.7726
549 3GEG NAD 12.9555
550 2OOR NAD 13.2184
551 2H88 TEO 14.2857
552 2YY7 NAD 14.4231
553 1V6A TRE 14.4578
554 1Z0N BCD 14.5833
555 4D42 W0I 14.8936
556 4D42 NAP 14.8936
557 1JA9 NDP 14.9635
558 3RFV NAI 14.9813
559 3RFV 15L 14.9813
560 1WVG APR 15
561 2PZM NAD 15.1515
562 2PZM UDP 15.1515
563 3AFN NAP 15.5039
564 4G5H NAP 15.7143
565 4G5H UD7 15.7143
566 5X9D 80F 15.7895
567 4GLL NAD 16.0237
568 3MMH SME 16.1677
569 5L95 AMP 16.25
570 3OID NDP 16.2791
571 2FR1 NDP 16.4286
572 1N5D NDP 16.6667
573 1WMA AB3 17.029
574 1WMA NDP 17.029
575 1Z45 NAD 17.619
576 3A4V PYR 17.9811
577 3A4V NAD 17.9811
578 1XTT U5P 18.0556
579 1OC2 TDX 18.3908
580 1OC2 NAD 18.3908
581 5FFF NAP 19.8444
582 5FFF 5XC 19.8444
583 1GY8 NAD 21.4106
584 3KO8 NAD 21.7949
585 1SB8 NAD 21.875
586 1SB8 UD2 21.875
587 2BD0 NAP 22.541
588 4II2 ATP 22.8916
589 5WQP NAP 23.0769
590 5WQP NCA 23.0769
591 4TQG NDP 23.2198
592 2Q1W NAD 23.7237
593 1R6D NAD 23.7389
594 1R6D DAU 23.7389
595 1EQ2 NAP 24.1935
596 2CHT TSA 24.4094
597 1EK6 NAI 24.7126
598 1EK6 UPG 24.7126
599 5FEU NAP 24.7423
600 2GN4 NDP 25.2907
601 2GN4 UD1 25.2907
602 6BWL NAD 26.2195
603 2X6T NAP 26.3305
604 5Z75 NAD 26.9113
605 5ZEC NAP 28.9474
606 3LU1 NAD 29.3956
607 4R1S NAP 31.454
608 1GEE NAD 33.3333
609 3TN7 NJP 38.9105
610 5MSO NAP 40.4762
Pocket No.: 2; Query (leader) PDB : 4U7W; Ligand: NDP; Similar sites found with APoc: 31
This union binding pocket(no: 2) in the query (biounit: 4u7w.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 5AHN IMP 1.19048
2 4WOV 3SM 1.26183
3 1MUU SUC 1.42857
4 3EUF BAU 1.52439
5 2HY0 306 1.5528
6 4L8V NAP 1.78042
7 2AWN ADP 2.09974
8 1C3X 8IG 2.25564
9 1VRP IOM 2.3622
10 3KC1 2T6 2.37389
11 1ZDQ MSM 2.67857
12 1KJ8 GAR 3.06905
13 1ZGS XMM 3.33333
14 4GN8 ASO 4.01338
15 4OSP 2V4 4.18251
16 3HZT J60 4.28571
17 4UP3 NDP 4.4586
18 2IMG MLT 4.63576
19 4JP3 CIT 5.02092
20 1I7Q PYR 5.18135
21 1W2D ADP 5.28302
22 5CGE 51F 5.41516
23 1GEG GLC 5.46875
24 1P7T PYR 5.47619
25 2XYQ SAH 6.55738
26 6D2O 4MZ 6.69856
27 2E5V FAD 6.90476
28 3LL5 IP8 7.22892
29 2IOY RIP 7.42049
30 3JQ8 DX3 7.98611
31 5JDI 6JO 7.98611
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