Receptor
PDB id Resolution Class Description Source Keywords
4US3 2.1 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF THE BACTERIAL NSS MEMBER MHST IN AN OCCLUDED INWARD-FACING STATE BACILLUS HALODURANS TRANSPORT PROTEIN NEUROTRANSMITTER NEUROTRANSMITTER SODIUMSYMPORTER FAMILY LEUT FOLD AMINO ACID TRANSPORTER SECONDTRANSPORTER MEMBRANE PROTEIN
Ref.: A MECHANISM FOR INTRACELLULAR RELEASE OF NA+ BY NEUROTRANSMITTER/SODIUM SYMPORTERS NAT.STRUCT.MOL.BIOL. V. 21 1006 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BNG A:1451;
A:1450;
A:1449;
A:1458;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
306.395 C15 H30 O6 CCCCC...
NA A:701;
A:702;
Part of Protein;
Part of Protein;
none;
none;
submit data
22.99 Na [Na+]
TRP A:601;
Valid;
none;
Kd = 4.8 uM
204.225 C11 H12 N2 O2 c1ccc...
LMU A:1454;
A:1452;
A:1457;
A:1453;
A:1456;
A:1455;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
submit data
510.615 C24 H46 O11 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4US3 2.1 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF THE BACTERIAL NSS MEMBER MHST IN AN OCCLUDED INWARD-FACING STATE BACILLUS HALODURANS TRANSPORT PROTEIN NEUROTRANSMITTER NEUROTRANSMITTER SODIUMSYMPORTER FAMILY LEUT FOLD AMINO ACID TRANSPORTER SECONDTRANSPORTER MEMBRANE PROTEIN
Ref.: A MECHANISM FOR INTRACELLULAR RELEASE OF NA+ BY NEUROTRANSMITTER/SODIUM SYMPORTERS NAT.STRUCT.MOL.BIOL. V. 21 1006 2014
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 4US3 Kd = 4.8 uM TRP C11 H12 N2 O2 c1ccc2c(c1....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 4US3 Kd = 4.8 uM TRP C11 H12 N2 O2 c1ccc2c(c1....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 4US3 Kd = 4.8 uM TRP C11 H12 N2 O2 c1ccc2c(c1....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: TRP; Similar ligands found: 29
No: Ligand ECFP6 Tc MDL keys Tc
1 DTR 1 1
2 TRP 1 1
3 LTN 0.765957 0.777778
4 TR7 0.666667 0.833333
5 3IL 0.666667 0.75
6 4Z9 0.666667 0.75
7 FT6 0.561404 0.888889
8 IAC 0.538462 0.787879
9 TSR 0.529412 0.722222
10 IOP 0.518519 0.764706
11 R59 0.515152 0.72093
12 R38 0.515152 0.72093
13 3IB 0.491228 0.742857
14 ITW 0.491228 0.694444
15 IAD 0.484375 0.738095
16 TRP GLY 0.476923 0.704545
17 TSS 0.471698 0.666667
18 CTE 0.467742 0.888889
19 DTE 0.467742 0.888889
20 IAV 0.461538 0.738095
21 IAG 0.459016 0.738095
22 LYS TRP 0.432432 0.673913
23 78U 0.42623 0.794118
24 0ZN 0.421687 0.673913
25 4OG 0.416667 0.8
26 X95 0.411765 0.680851
27 LSW 0.411765 0.680851
28 ASP TRP ASN 0.405063 0.673913
29 GLU ASP ASN ASP TRP ASN 0.405063 0.673913
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4US3; Ligand: TRP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4us3.bio1) has 20 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback