Receptor
PDB id Resolution Class Description Source Keywords
4V0L 2.2 Å EC: 7.-.-.- CRYSTAL STRUCTURE OF THE CRARL6DN IN THE GTP BOUND FORM CHLAMYDOMONAS REINHARDTII HYDROLASE
Ref.: STRUCTURAL BASIS FOR MEMBRANE TARGETING OF THE BBSO ARL6 NAT.STRUCT.MOL.BIOL. V. 21 1035 2014
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GTP A:600;
B:600;
Valid;
Valid;
none;
none;
submit data
523.18 C10 H16 N5 O14 P3 c1nc2...
MG B:601;
A:601;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4V0K 1.44 Å EC: 7.-.-.- CRYSTAL STRUCTURE OF THE CRARL6DN IN THE GDP BOUND FORM CHLAMYDOMONAS REINHARDTII HYDROLASE
Ref.: STRUCTURAL BASIS FOR MEMBRANE TARGETING OF THE BBSO ARL6 NAT.STRUCT.MOL.BIOL. V. 21 1035 2014
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 250 families.
1 4V0K - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 4V0L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 217 families.
1 4V0K - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 4V0L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
50% Homology Family (19)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 181 families.
1 4V0K - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 4V0L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
3 2X77 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 1RRG - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
5 1HUR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
6 1O3Y - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
7 1FZQ Kd = 24 nM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
8 1Z6Y - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
9 1ZJ6 - G3D C10 H16 N5 O14 P3 c1nc2c(n1[....
10 1YZG - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
11 3N5C - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
12 1E0S - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 1ZD9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 2AL7 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
15 3AQ4 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
16 4Y0V - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
17 4YLG - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
18 1MR3 - G3D C10 H16 N5 O14 P3 c1nc2c(n1[....
19 4BAS - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GTP; Similar ligands found: 147
No: Ligand ECFP6 Tc MDL keys Tc
1 GTP 1 1
2 GP3 0.921053 0.973684
3 GDP 0.909091 1
4 GSP 0.853659 0.948718
5 GNH 0.82716 0.986667
6 G1R 0.819277 0.986667
7 GAV 0.811765 0.961039
8 GNP 0.809524 0.973684
9 GCP 0.797619 0.973684
10 5GP 0.797468 0.986486
11 G 0.797468 0.986486
12 GMV 0.764706 0.973684
13 G2R 0.764045 0.961039
14 G5P 0.755319 0.973684
15 GTG 0.752688 0.936709
16 G2P 0.747126 0.961039
17 G3A 0.744681 0.973684
18 GDD 0.741935 0.961039
19 GKE 0.741935 0.961039
20 GDC 0.741935 0.961039
21 0O2 0.736264 0.986486
22 GP2 0.729412 0.961039
23 6CK 0.726316 0.936709
24 Y9Z 0.723404 0.902439
25 GPG 0.717391 0.961039
26 GFB 0.715789 0.961039
27 GDR 0.715789 0.961039
28 GDP MG 0.712644 0.923077
29 GDP BEF 0.704545 0.9
30 GPD 0.704082 0.925
31 JB2 0.693878 0.961039
32 GKD 0.693878 0.961039
33 GCP G 0.692308 0.935065
34 GDX 0.686869 0.973684
35 ALF 5GP 0.685393 0.888889
36 GTP MG 0.681319 0.923077
37 BEF GDP 0.681319 0.888889
38 GH3 0.681319 0.973333
39 YGP 0.677083 0.901235
40 G3D 0.67033 0.986486
41 GDP AF3 0.659574 0.888889
42 GDP ALF 0.659574 0.888889
43 DGT 0.659341 0.923077
44 GMP 0.658228 0.88
45 G4P 0.655914 0.986486
46 JB3 0.653846 0.948718
47 NGD 0.647619 0.961039
48 CAG 0.642202 0.880952
49 2MD 0.62963 0.891566
50 G G 0.622449 0.935065
51 MGP 0.619565 0.961039
52 U2G 0.616822 0.936709
53 6G0 0.612903 0.961039
54 MGD 0.612613 0.891566
55 TPG 0.608696 0.840909
56 CG2 0.605505 0.936709
57 GDP 7MG 0.601942 0.911392
58 FEG 0.601852 0.879518
59 ZGP 0.59633 0.869048
60 MD1 0.591304 0.891566
61 PGD 0.591304 0.925
62 3GP 0.590909 0.946667
63 GPX 0.581633 0.946667
64 DGI 0.580645 0.923077
65 IDP 0.576087 0.972973
66 DBG 0.567797 0.948718
67 FE9 0.555556 0.776596
68 2GP 0.555556 0.96
69 G4M 0.547619 0.880952
70 BGO 0.544643 0.924051
71 I2C FE2 CMO CMO 0.538462 0.808989
72 ATP 0.537634 0.92
73 G1G 0.533898 0.925
74 AQP 0.531915 0.92
75 5FA 0.531915 0.92
76 G A A A 0.525862 0.923077
77 U A G G 0.521368 0.935065
78 01G 0.518868 0.902439
79 ITT 0.510638 0.868421
80 P2G 0.510638 0.883117
81 GGM 0.504274 0.901235
82 G1R G1R 0.504065 0.924051
83 DGP 0.5 0.910256
84 PGD O 0.5 0.850575
85 MGO 0.5 0.864198
86 P1G 0.5 0.871795
87 DG 0.5 0.910256
88 GTA 0.495495 0.936709
89 B4P 0.489362 0.894737
90 AP5 0.489362 0.894737
91 IMP 0.489362 0.959459
92 7DT 0.484536 0.906667
93 G G U 0.482143 0.935065
94 GPC 0.479339 0.879518
95 G C 0.478992 0.9
96 BA3 0.478723 0.894737
97 ADP 0.473684 0.92
98 G2Q 0.471698 0.961039
99 G7M 0.46875 0.948052
100 25L 0.458716 0.907895
101 A2D 0.457447 0.894737
102 RGT 0.45045 0.909091
103 AGS 0.45 0.873418
104 SAP 0.45 0.873418
105 SGP 0.44898 0.82716
106 U G A 0.448529 0.888889
107 A4P 0.445378 0.869048
108 G G G RPC 0.442623 0.875
109 ACQ 0.441176 0.896104
110 ANP 0.441176 0.896104
111 8GT 0.441176 0.875
112 APC G U 0.44 0.886076
113 G U34 0.438017 0.888889
114 6AD 0.436893 0.841463
115 G G G C 0.433071 0.9125
116 UP5 0.432203 0.873418
117 35G 0.431373 0.933333
118 C2E 0.431373 0.921053
119 PCG 0.431373 0.933333
120 A G C C 0.429688 0.911392
121 5GP 5GP 0.427184 0.883117
122 TAT 0.427184 0.884615
123 APR 0.425743 0.894737
124 AR6 0.425743 0.894737
125 AN2 0.424242 0.907895
126 7DD 0.424242 0.906667
127 DG DG 0.423423 0.865854
128 AD9 0.421569 0.896104
129 M33 0.42 0.883117
130 7D4 0.42 0.835443
131 UCG 0.419847 0.911392
132 H6Y 0.419048 0.946667
133 G C C C 0.416667 0.924051
134 ACP 0.415842 0.896104
135 T5A 0.414634 0.802326
136 MGQ 0.412844 0.935897
137 ADQ 0.412844 0.871795
138 A1R 0.412844 0.839506
139 MGT 0.411215 0.823529
140 A G U 0.410072 0.888889
141 93A 0.41 0.833333
142 A22 0.407407 0.907895
143 CA0 0.405941 0.896104
144 ATF 0.40566 0.884615
145 AGO 0.404762 0.888889
146 MGV 0.401786 0.890244
147 CGP 0.4 0.86747
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4V0K; Ligand: GDP; Similar sites found: 448
This union binding pocket(no: 1) in the query (biounit: 4v0k.bio2) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2QZ4 ADP 0.000504 0.40359 None
2 4UCC ZKW 0.02387 0.40348 None
3 3BOS CDP 0.0001824 0.40193 1.18343
4 3EZ2 ADP 0.000867 0.47672 1.77515
5 1UJ2 C5P 0.0003335 0.45216 1.77515
6 3KJI ADP 0.00005158 0.44399 1.77515
7 1UJ2 ADP 0.0006353 0.44068 1.77515
8 3H86 AP5 0.001654 0.43372 1.77515
9 2OZE AGS 0.001004 0.40965 1.77515
10 1OXV ANP 0.00007492 0.40121 1.77515
11 1Z08 GNP 0.000000151 0.57566 2.36686
12 1Z6T ADP 0.0008821 0.45101 2.36686
13 1P72 ADP 0.0006073 0.44934 2.36686
14 3ZFD ANP 0.0001234 0.42281 2.36686
15 3FYH ADP 0.002473 0.41318 2.36686
16 1M7G ADX 0.0001784 0.4701 2.95858
17 5L3W GDP 0.000006894 0.46944 2.95858
18 1M7G ADP 0.0002578 0.4602 2.95858
19 5J1J ANP 0.0001602 0.45603 2.95858
20 1M7G AV2 0.00000269 0.44976 2.95858
21 4Q1A UDP 0.01376 0.44497 2.95858
22 4Q1A 2XZ 0.01376 0.44497 2.95858
23 4RZ3 ADP 0.000104 0.43976 2.95858
24 2BEK ATP 0.002966 0.41648 2.95858
25 1DAK DPU 0.007808 0.41259 2.95858
26 4BFW ZVW 0.009766 0.40639 2.95858
27 1RRC ADP 0.000004963 0.40358 2.95858
28 5GOE GDP 0.000000005734 0.56912 3.5503
29 3ZQ6 ADP ALF 0.0001881 0.46236 3.5503
30 2QQ0 TMP 0.002036 0.42727 3.5503
31 2QQ0 ANP 0.002336 0.42477 3.5503
32 2QQ0 THM 0.002288 0.42238 3.5503
33 3QXC ATP 0.003389 0.41086 3.5503
34 3R7F CP 0.02567 0.40895 3.5503
35 1T5C ADP 0.000004589 0.40209 3.5503
36 4PFO ADP 0.005531 0.40058 3.5503
37 1ZUI SKM 0.0007798 0.44886 3.57143
38 2NCD ADP 0.00001919 0.57432 4.14201
39 3FKQ ATP 0.0002333 0.47692 4.14201
40 2QEN ADP 0.00003994 0.45337 4.14201
41 5K5Z ANP 0.001609 0.42076 4.14201
42 2Y65 ADP 0.000004312 0.41522 4.14201
43 1BG2 ADP 0.000001292 0.41496 4.14201
44 5I0H ADP BEF 0.001059 0.41228 4.14201
45 1NJF ADP 0.0008813 0.41075 4.14201
46 1NJF AGS 0.001972 0.40802 4.14201
47 2C9O ADP 0.001466 0.40785 4.14201
48 5BYK OAQ 0.00883 0.40726 4.14201
49 5BYK A3P 0.00883 0.40726 4.14201
50 1SQ5 ADP 0.0002283 0.40589 4.14201
51 2XAU ADP 0.000405 0.40154 4.14201
52 1JI0 ATP 0.00002599 0.56166 4.73373
53 2ZFI ADP 0.00009099 0.51918 4.73373
54 3E70 GDP 0.0000005632 0.49442 4.73373
55 1P9B GDP 0.0001241 0.4387 4.73373
56 1QF9 C5P 0.003908 0.42027 4.73373
57 1QF9 ADP 0.003908 0.42027 4.73373
58 1QF9 ALF 0.003908 0.42027 4.73373
59 3COB ADP 0.00000338 0.41569 4.73373
60 4IHQ ADP 0.00004949 0.41267 4.73373
61 3Q9L ATP 0.0007759 0.40866 4.73373
62 4P32 ADP 0.001961 0.4064 4.73373
63 4GOX A3P 0.00288 0.40585 4.73373
64 2IYL GDP 0.000001025 0.48144 4.92958
65 3MD0 GDP 0.0000000004939 0.5589 5.32544
66 3TK1 GDP 0.0000000005955 0.54856 5.32544
67 1W7J ADP BEF 0.001467 0.44109 5.32544
68 3UIE ANP 0.00004468 0.43726 5.32544
69 1XKV ATP 0.00009164 0.43142 5.32544
70 2XT3 ADP 0.000002778 0.41652 5.32544
71 1OS1 ATP 0.002939 0.41641 5.32544
72 1OS1 PYR 0.003182 0.41641 5.32544
73 2VB6 ADP BEF 0.002182 0.41056 5.32544
74 3CV2 OXL 0.02345 0.41034 5.32544
75 3EWA ANP 0.00009447 0.40956 5.32544
76 1G7S GDP 0.000000001362 0.7443 5.91716
77 4LC1 GDP 0.000000009336 0.71534 5.91716
78 1XTQ GDP 0.00000009253 0.58407 5.91716
79 3T5G GDP 0.000000005208 0.56876 5.91716
80 1YRB GDP 0.00000001606 0.56584 5.91716
81 5VGR GDP 0.0002999 0.47203 5.91716
82 2ZR9 DTP 0.000005558 0.44564 5.91716
83 1YTM ATP 0.0009012 0.44221 5.91716
84 1G3Q ADP 0.00005224 0.43206 5.91716
85 1ION ADP 0.0001653 0.4217 5.91716
86 4X8O AP5 0.007043 0.41738 5.91716
87 2ZPA ADP 0.001206 0.40391 5.91716
88 1CM0 COA 0.01284 0.40561 5.95238
89 3U6B GDP 0.0000000001042 0.82568 6.50888
90 2BVN GNP 0.000000002211 0.71235 6.50888
91 1GOJ ADP 0.000002514 0.62877 6.50888
92 5JBQ GDP 0.0000000001485 0.59231 6.50888
93 1D8T GDP 0.0000000001569 0.59136 6.50888
94 4P3Y GDP 0.00000000006337 0.58955 6.50888
95 4G5G GDP 0.0000000002055 0.58833 6.50888
96 4TMZ GSP 0.0000001113 0.58117 6.50888
97 3U6K GDP 0.0000000004612 0.58033 6.50888
98 1D2E GDP 0.000000006676 0.58005 6.50888
99 2CBZ ATP 0.00002154 0.57939 6.50888
100 4NCN GTP 0.000000126 0.57901 6.50888
101 4PC3 GDP 0.000000007986 0.57616 6.50888
102 4NON GDP 0.00000003235 0.57556 6.50888
103 4CVN ADP 0.00004369 0.54998 6.50888
104 2C04 GCP 0.000006314 0.54725 6.50888
105 1RYH GNP 0.00000008244 0.53129 6.50888
106 1RJ9 GCP 0.00005734 0.50653 6.50888
107 5BQ5 ADP BEF 0.000461 0.47351 6.50888
108 2OFW ADX 0.0006162 0.45701 6.50888
109 2PEZ DAT 0.0004311 0.45559 6.50888
110 2PEZ GGZ 0.0004311 0.45559 6.50888
111 4QOS ADP 0.001148 0.45491 6.50888
112 1X6V ADP 0.0004571 0.4499 6.50888
113 3FWY ADP 0.00006278 0.44825 6.50888
114 1UKZ ADP 0.00218 0.42736 6.50888
115 1XMV ADP 0.00004502 0.42731 6.50888
116 1SVM ATP 0.005883 0.42261 6.50888
117 1W4R TTP 0.002246 0.41975 6.50888
118 5TIV A3P 0.006476 0.4171 6.50888
119 2RGX AP5 0.006531 0.41597 6.50888
120 4OHY ANP 0.002928 0.41021 6.50888
121 1XP8 AGS 0.00007516 0.40969 6.50888
122 5XDR ADP 0.0002356 0.4011 6.50888
123 1YQT ADP 0.00002274 0.40058 6.50888
124 5MVR ADP 0.000278 0.40196 6.79012
125 1HTW ADP 0.0001527 0.41508 6.96203
126 4HI0 GDP 0.00000003894 0.62997 7.10059
127 2C77 GNP 0.00000001742 0.59439 7.10059
128 1WDT GTP 0.0000009855 0.57636 7.10059
129 5FTB ANP 0.002152 0.4421 7.10059
130 5FHD ADP ALF 0.001729 0.43003 7.10059
131 3IO3 ADP 0.0003811 0.42483 7.10059
132 4KFU ACP 0.000004536 0.42262 7.10059
133 1F9V ADP 0.00001097 0.41291 7.10059
134 4OI4 ATP 0.001928 0.41285 7.10059
135 1K6M AGS 0.002058 0.41119 7.10059
136 1G6H ADP 0.0000006843 0.40946 7.10059
137 1JJ7 ADP 0.0000008319 0.40899 7.10059
138 2IXE ATP 0.001833 0.40791 7.10059
139 4YMU ATP 0.00004326 0.40753 7.10059
140 4D81 ADP 0.0005691 0.40732 7.10059
141 4U00 ADP 0.0000009674 0.4051 7.10059
142 3LRE ADP 0.000003692 0.40253 7.10059
143 2FAH GDP 0.00143 0.40234 7.10059
144 4ZKD GDP 0.00000004594 0.61041 7.69231
145 4BQS ADP 0.00002299 0.54856 7.69231
146 5L3V GDP 0.0000004528 0.507 7.69231
147 5L3S GNP 0.00001668 0.50123 7.69231
148 2XTN GTP 0.00001482 0.49761 7.69231
149 1G6O ADP 0.0005178 0.47114 7.69231
150 5H56 ADP 0.0002265 0.46417 7.69231
151 5H56 TYD 0.0002265 0.46417 7.69231
152 2FNA ADP 0.0003995 0.4532 7.69231
153 4BQS K2Q 0.0006807 0.45137 7.69231
154 2QG6 NMN 0.0007426 0.43957 7.69231
155 2BIF SIN 0.002582 0.43452 7.69231
156 2BIF ANP 0.00203 0.42866 7.69231
157 3IIJ ADP 0.000026 0.42686 7.69231
158 4QM7 GTP 0.00004492 0.41742 7.69231
159 1V8K ANP 0.00008178 0.41599 7.69231
160 4ZG4 VO4 ADP 0.002343 0.40919 7.69231
161 5HR5 ADP 0.0005836 0.40899 7.69231
162 3QKT ANP 0.00402 0.40462 7.69231
163 4KVA GTP 0.00004476 0.40389 7.69231
164 1B0U ATP 0.0005738 0.40101 7.69231
165 5LTJ ADP 0.0002723 0.40097 7.69231
166 2VOH CIT 0.005999 0.423 8.28025
167 3WYA GDP 0.00000000004132 0.6117 8.28402
168 4P4T GDP 0.0000002164 0.60527 8.28402
169 3WY9 GDP 0.0000000003001 0.57323 8.28402
170 3T34 GDP 0.00001528 0.50776 8.28402
171 1Y63 ADP 0.000006198 0.44609 8.28402
172 2ZTS ADP 0.001041 0.44355 8.28402
173 4PPF FLC 0.00000007666 0.42282 8.28402
174 4TTQ ATP 0.00007371 0.41735 8.28402
175 1CR1 TTP 0.002111 0.40207 8.28402
176 4RD0 GDP 0.00000002105 0.6004 8.87574
177 1KK1 GNP 0.0000000002544 0.57583 8.87574
178 1G7C 5GP 0.00000000279 0.55592 8.87574
179 2DPY ADP 0.0004545 0.49733 8.87574
180 4R43 GDP 0.0002711 0.49587 8.87574
181 1QF5 GDP 0.0004402 0.47427 8.87574
182 1ZIN AP5 0.003053 0.42823 8.87574
183 1S3G AP5 0.003242 0.4271 8.87574
184 3FB4 AP5 0.003767 0.42428 8.87574
185 1KO8 6PG 0.0003859 0.42259 8.87574
186 5IRN ADP 0.0002092 0.42038 8.87574
187 4MKG AP5 0.004767 0.41987 8.87574
188 4MKF AP5 0.005409 0.41853 8.87574
189 5G41 AP5 0.006931 0.41768 8.87574
190 2KIN ADP 0.000001245 0.41333 8.87574
191 1QF5 RPL 0.04231 0.41066 8.87574
192 2YOH WMJ 0.0005947 0.40359 8.87574
193 3B9Q MLI 0.000008707 0.5875 9.46746
194 4AG5 ADP 0.00001284 0.58502 9.46746
195 1WF3 GNP 0.0000004494 0.56982 9.46746
196 1JWY GDP 0.0000001384 0.53591 9.46746
197 4U5X GNP 0.0000009975 0.51993 9.46746
198 5L3R GCP 0.00001236 0.50651 9.46746
199 3A4M ADP 0.000003705 0.43512 9.46746
200 3BER AMP 0.00688 0.42673 9.46746
201 2QN6 GDP 0.00000000005186 0.59116 9.67742
202 3QF7 ANP 0.001518 0.40041 10
203 1PUJ GNP 0.0000000003086 0.62381 10.0592
204 2WOJ ADP ALF 0.0006019 0.44164 10.0592
205 4XTR ATP 0.0003966 0.4405 10.0592
206 4XVU ATP 0.0004274 0.43922 10.0592
207 3ZS9 ADP ALF 0.0007075 0.43877 10.0592
208 1LVG ADP 0.000002169 0.4376 10.0592
209 4XTR ADP 0.0005031 0.42039 10.0592
210 2RCN GDP 0.0000000006167 0.57101 10.6509
211 3PQC GDP 0.000001286 0.49478 10.6509
212 5I34 GDP 0.0000156 0.44859 10.6509
213 4E03 ADP 0.00007356 0.43017 10.6509
214 3H4S ADP 0.000006297 0.40822 10.6509
215 2CHG ANP 0.001072 0.40776 10.6509
216 4FRZ ADP 0.00001876 0.40679 10.6509
217 2VVG ADP 0.000003253 0.40532 10.6509
218 5X40 ACP 0.003114 0.40393 10.6509
219 1IWE IMP 0.001067 0.4849 11.2426
220 1NHX FTB 0.006749 0.41727 11.8343
221 1NHX PEP 0.00659 0.41677 11.8343
222 2GMV PEP 0.004478 0.41023 11.8343
223 3EC1 GDP 0.000000004829 0.56337 12.426
224 3W5J GDP 0.00000003787 0.47163 12.426
225 4XGU ADP 0.00003251 0.45696 12.426
226 1IHU ADP 0.0002862 0.44575 12.426
227 1IHU AF3 0.0002064 0.44575 12.426
228 4IDN GNP 0.002159 0.40605 12.426
229 4J0Q GDP 0.00000000007203 0.83377 13.0178
230 5IRR GSP 0.0000228 0.50564 13.6095
231 1NN5 ANP 0.0006734 0.44599 13.6095
232 3ZIA ADP 0.00005257 0.44431 13.6095
233 3ZIA ATP 0.00002393 0.44281 13.6095
234 2B8W ALF 5GP 0.002406 0.41367 13.6095
235 1F5N GNP 0.001444 0.41037 13.6095
236 1IN4 ADP 0.001295 0.40367 13.6095
237 3CNL GNP 0.0000000001132 0.58245 14.2012
238 2Q2Y ADP 0.003837 0.42394 14.7929
239 2Q2Y MKR 0.004037 0.42191 14.7929
240 2CJW GDP 0.00000000003069 0.6112 15.3846
241 3DEF GDP 0.000004825 0.47959 15.3846
242 3TMK T5A 0.0006436 0.44374 15.3846
243 2WJH GDP 0.00000000461 0.56644 15.6627
244 2WJH FLC 0.0000002241 0.51976 15.6627
245 1FNN ADP 0.0005699 0.45505 15.9763
246 1X1R GDP 0.000001037 0.55492 16.568
247 4KVG GTP 0.0000007879 0.55745 17.2619
248 3Q72 GNP 0.000000001675 0.54919 17.4699
249 2ZEJ GDP 0.0000001044 0.5958 17.7515
250 1W0J ADP 0.00002479 0.45606 17.7515
251 2V7Q ATP 0.00002174 0.45058 17.7515
252 2CK3 ANP 0.005931 0.41031 17.7515
253 3X1Z GNP 0.0000007919 0.56202 17.9641
254 4HDO GNP 0.0000008588 0.55829 17.9641
255 4HDQ GNP 0.000001895 0.5442 17.9641
256 1GUA GNP 0.0000007679 0.53506 17.9641
257 1D2N ANP 0.002217 0.40065 18.0147
258 4WZA ACP 0.001067 0.46492 18.3432
259 4WZA ADP 0.001067 0.46492 18.3432
260 1FP6 ADP 0.00008529 0.4358 18.3432
261 5M04 GDP 0.0000000002312 0.57603 18.9349
262 3REF GDP 0.000001203 0.53251 18.9349
263 4H1V GNP 0.0000004335 0.59944 19.5266
264 5HCN GCP 0.00000001734 0.55022 19.5266
265 4V03 ADP 0.0001015 0.42602 19.5266
266 1KAO GDP 0.0000001023 0.54564 19.7605
267 1TAD GDP 0.00000002755 0.6246 20.1183
268 1TAD ALF 0.00000002755 0.6246 20.1183
269 4D0G GTP 0.00000007335 0.57895 20.1183
270 1Z0F GDP 0.000000003632 0.56193 20.1183
271 5CK5 GDP 0.000000007927 0.53309 20.1183
272 4LYA ATP 0.0000913 0.42687 20.1183
273 5IFS ADP 0.0004818 0.40359 20.7101
274 2XTZ GSP 0.00000006372 0.60198 21.3018
275 2FFQ GSP 0.0000001848 0.58564 21.8935
276 3VX3 ADP 0.0002345 0.43263 21.8935
277 1M7B GTP 0.0000009274 0.57074 22.4852
278 2Y8E GNP 0.0000002265 0.56565 22.4852
279 1GWN GTP 0.000001518 0.52269 22.4852
280 2OM2 GDP 0.000000009966 0.65543 23.0769
281 1GP2 GDP 0.00000002067 0.62634 23.0769
282 1BH2 GSP 0.00000004059 0.61764 23.0769
283 5KDO GDP 0.000000008601 0.60575 23.0769
284 1Y3A GDP 0.00000002771 0.60499 23.0769
285 1YZN GNP 0.0000003998 0.5719 23.0769
286 4DKX GDP 0.0000000001931 0.79818 23.6686
287 3CX8 GSP 0.00000002004 0.63033 23.6686
288 2ODE ALF GDP 0.00000002175 0.62885 23.6686
289 1ZCB GDP 0.00000002994 0.61536 23.6686
290 1GOT GDP 0.00000001794 0.6033 23.6686
291 3AB3 GDP 0.00000003447 0.58271 23.6686
292 2BCG GDP 0.00000004254 0.56902 23.6686
293 2CE7 ADP 0.0004325 0.40363 23.6686
294 1YZQ GNP 0.0000001553 0.58873 24.2604
295 3E5H GNP 0.000000397 0.56959 24.2604
296 1SVK ALF GDP 0.00000002224 0.63088 24.8521
297 1FQJ GDP 0.00000002025 0.62671 24.8521
298 1FQK GDP 0.00000003153 0.60282 24.8521
299 1AZT GSP 0.00000001252 0.63879 25.4438
300 1CS4 GSP 0.00000006571 0.56485 25.4438
301 5KUT GDP 0.00000003231 0.5302 25.4438
302 4IEE AGS 0.0001654 0.51302 25.4438
303 1Z2A GDP 0.0000002655 0.58052 25.5952
304 1ZC3 GNP 0.0000001027 0.59609 26.0355
305 2HT6 GDP 0.00000000009477 0.58143 26.0355
306 1UAD GNP 0.0000008148 0.55685 26.0355
307 2A9K GDP 0.00000006404 0.55241 26.0355
308 1U8Z GDP 0.00000006842 0.60486 26.1905
309 5UQW GDP 0.0000006268 0.55901 26.6272
310 1NVU GTP 0.0000006303 0.56379 27.1084
311 4K81 GTP 0.0000001708 0.58946 27.2189
312 4R98 GNH 0.000000004314 0.5592 27.2189
313 2W2X GSP 0.000001417 0.52318 27.2189
314 5E95 GDP 0.00000001618 0.57591 27.381
315 1LFD GNP 0.0000005674 0.56326 27.5449
316 2UZI GTP 0.00000053 0.56447 27.7108
317 1NVV GNP 0.0000009237 0.55699 27.7108
318 3DDC GNP 0.000001069 0.55438 27.7108
319 3KUD GDP 0.0000002327 0.5509 27.7108
320 1WQ1 GDP 0.0000007428 0.54817 27.7108
321 2WIC GNP 0.000000000635 0.76021 27.8107
322 3Q85 GNP 0.0000000003378 0.58109 27.8107
323 5KSP GDP 0.0000004978 0.49616 28.4024
324 5KSZ GCP 0.000001627 0.49047 28.4024
325 1CLU DBG 0.000000498 0.59471 28.9157
326 2A5J GDP 0.000000004599 0.70806 28.9941
327 2C78 GNP 0.00000002243 0.59951 28.9941
328 1YVD GNP 0.0000002581 0.57721 28.9941
329 1A4R GDP 0.0000006058 0.52912 28.9941
330 1SVI GDP 0.0000000135 0.52758 28.9941
331 2WMO GTP 0.0000001311 0.5253 28.9941
332 1A4R GNH 0.000000606 0.52272 28.9941
333 1DS6 GDP 0.00000004169 0.51908 28.9941
334 1NF3 GNP 0.000008646 0.51503 28.9941
335 4DID GDP 0.0000001487 0.51219 28.9941
336 2NGR GDP 0.0000002428 0.50643 28.9941
337 4ITR GDP 0.000002344 0.50635 28.9941
338 1GRN GDP 0.00000172 0.50366 28.9941
339 1HE1 GDP 0.000003221 0.54748 29.5858
340 2FJU GSP 0.000001454 0.52298 29.5858
341 4YC7 GNP 0.000002385 0.52122 29.5858
342 1E96 GTP 0.000006853 0.51915 29.5858
343 1I4D GDP 0.00000004012 0.51131 29.5858
344 1G4U GDP 0.000002473 0.50601 29.5858
345 1HE1 AF3 0.03079 0.40414 29.5858
346 2HCJ GDP 0.00000000008299 0.58681 29.7297
347 3T12 GDP ALF 0.00000001065 0.64604 30.1775
348 3T1O GDP 0.0000000009797 0.59419 30.1775
349 1OIX GDP 0.0000001827 0.58332 30.1775
350 2F9L GDP 0.0000001553 0.57514 30.1775
351 1OIV GDP 0.000000407 0.56914 30.1775
352 1Z0A GDP 0.000000005853 0.56779 30.1775
353 1MH1 GNP 0.000003537 0.53309 30.1775
354 3SBD GNP 0.000006748 0.51942 30.1775
355 1MKY GDP 0.000000000008354 0.62766 30.7692
356 1Z0J GTP 0.0000003082 0.57653 30.7692
357 2WKQ GTP 0.000006062 0.52436 30.7692
358 3RAB GNP 0.0000002139 0.58054 31.3609
359 3WYF GTP 0.0000003965 0.57439 31.3609
360 3WYG GTP 0.0000004998 0.57025 31.3609
361 3M1I GTP 0.000000459 0.56944 31.3609
362 3BC1 GNP 0.000000365 0.57107 31.9527
363 2EW1 GNP 0.0000002406 0.56784 31.9527
364 3VMF GTP 0.0000003276 0.57299 32.5444
365 1DAR GDP 0.000000001239 0.56783 32.5444
366 3WXM GTP 0.0000004756 0.56639 32.5444
367 2EFE GNH 0.00000002662 0.55674 32.5444
368 1G16 GDP 0.0000008243 0.53818 32.5444
369 5WDR GNP 0.0000005949 0.56482 32.7485
370 1R2Q GNP 0.00000003923 0.62944 33.1361
371 3TNF GNP 0.0000004012 0.57418 33.1361
372 5FG3 GDP 0.0000000003405 0.57001 33.1361
373 3QBT GNP 0.0000002921 0.56127 33.1361
374 4LHW GNP 0.0000006295 0.54816 33.1361
375 3MJH GTP 0.0000001517 0.58662 33.3333
376 2D7C GTP 0.000000245 0.57813 33.5329
377 3GJ0 GDP 0.000000002104 0.74717 33.7278
378 3GJ8 GDP 0.000000001709 0.73957 33.7278
379 4C4P GNP 0.0000001698 0.58715 33.7278
380 5BXQ GDP 0.000000001178 0.57914 33.7278
381 4LX0 BEF GDP 0.0000002714 0.5788 33.7278
382 3CH5 GDP 0.000000001472 0.57745 33.7278
383 2HV8 GTP 0.0000002617 0.57697 33.7278
384 5UWP GNP 0.0000003467 0.57679 33.7278
385 5DIF GNP 0.0000003123 0.5763 33.7278
386 5UWU GNP 0.0000003257 0.57555 33.7278
387 5UWW GNP 0.0000003278 0.57543 33.7278
388 5UWO GNP 0.0000003399 0.57479 33.7278
389 5UWS GNP 0.0000004004 0.57422 33.7278
390 4HAT GNP 0.0000004017 0.57416 33.7278
391 5UWI GNP 0.0000003596 0.57378 33.7278
392 5DHF GNP 0.0000003604 0.57374 33.7278
393 3GJ5 GDP 0.000000002157 0.573 33.7278
394 5UWR GNP 0.0000003823 0.57269 33.7278
395 5DI9 GNP 0.0000004366 0.57267 33.7278
396 5UWT GNP 0.0000004003 0.57188 33.7278
397 5UWH GNP 0.0000004055 0.57165 33.7278
398 1IBR GNP 0.0000004659 0.56917 33.7278
399 3GJ3 GDP 0.000000001325 0.56661 33.7278
400 3GJ7 GDP 0.000000002169 0.56143 33.7278
401 3GJ4 GDP 0.000000002222 0.56134 33.7278
402 3GJX GTP 0.0000007298 0.56118 33.7278
403 5UWQ GNP 0.0000003269 0.54884 33.7278
404 5UWJ GNP 0.0000003592 0.54734 33.7278
405 5JCZ GDP 0.0000002634 0.5388 33.7278
406 1TX4 ALF GDP 0.000006588 0.52287 33.7278
407 1KMQ GNP 0.000004173 0.51913 33.7278
408 2J0V GDP 0.0000001187 0.51341 33.7278
409 5HPY GDP 0.000001281 0.50805 33.7278
410 1WA5 GTP 0.0000006906 0.50246 33.7278
411 1NRJ GTP 0.00000006707 0.57352 35.503
412 3SFV GDP 0.0000001754 0.55519 35.503
413 4D0N GDP 0.00000002718 0.52408 35.503
414 4XSH GSP 0.0000008465 0.52396 35.503
415 2GCO GNP 0.0000006408 0.52076 35.503
416 2GCN GDP 0.000003155 0.51677 35.503
417 1CXZ GSP 0.000003374 0.51631 35.503
418 4XOI GTP 0.000009317 0.51149 35.503
419 1OW3 GDP 0.000001939 0.50217 35.503
420 5IRC GDP 0.00000383 0.47597 35.503
421 2G77 GDP 0.00000001469 0.66539 36.0947
422 5JCP GDP ALF 0.0000007047 0.58997 36.0947
423 5SZH GNP 0.0000002271 0.58197 36.0947
424 1SKQ GDP 0.0000000001709 0.57832 36.0947
425 3TKL GTP 0.0000002934 0.57238 36.0947
426 3NKV GNP 0.0000004434 0.56763 36.0947
427 2G77 AF3 0.01893 0.41632 36.0947
428 3LXR GDP 0.0000003363 0.62063 36.6864
429 1Z06 GNP 0.0000001424 0.58511 36.6864
430 1VG8 GNP 0.0000002314 0.58163 37.2781
431 1VG1 GDP 0.0000000009186 0.57814 37.2781
432 3RWO GDP 0.0000002591 0.57715 37.2781
433 1VG9 GDP 0.000000001273 0.57527 37.2781
434 1VG0 GDP 0.000000008937 0.57185 37.2781
435 1S8F GDP 0.0000002223 0.58474 38.4615
436 2FH5 GTP 0.00000001542 0.59551 39.0533
437 2GJ8 ALF GDP 0.0000001914 0.55788 39.645
438 3CPJ GDP 0.00000003229 0.55429 39.645
439 1KY3 GDP 0.00000006415 0.54188 39.645
440 2C5L GTP 0.0000005456 0.56636 40.8284
441 3A1S GDP 0.000000075 0.53343 40.8284
442 2WJG GDP 0.0000000007239 0.76995 41.4201
443 2BME GNP 0.0000002044 0.58134 41.4201
444 1Z0K GTP 0.0000001185 0.58003 41.4201
445 4DSU GDP 0.0000002767 0.57845 41.4201
446 1EK0 GNP 0.000001444 0.54672 41.4201
447 4B47 GDP 0.0000000001092 0.58248 42.0118
448 4DCT GDP 0.000000002451 0.5708 42.0118
Pocket No.: 2; Query (leader) PDB : 4V0K; Ligand: GDP; Similar sites found: 59
This union binding pocket(no: 2) in the query (biounit: 4v0k.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3B7G ANP 0.0005894 0.42081 None
2 2GDJ ANP 0.0003237 0.42626 1.77515
3 2PZE ATP 0.00001618 0.42326 1.77515
4 2AWN ADP 0.0000003898 0.43424 2.36686
5 1DAK ADP 0.04619 0.41274 2.95858
6 5LB3 ADP 0.0004719 0.41436 3.5503
7 3DKP ADP 0.0001921 0.43067 4.14201
8 1NST A3P 0.005289 0.40006 4.14201
9 1VHT BA3 0.0006877 0.42806 4.73373
10 3KTA AP5 0.0007371 0.42898 5.32544
11 4FCW ADP 0.001531 0.40771 5.32544
12 4JLV ADP 0.0003707 0.41568 5.91716
13 5WRJ A3P 0.005907 0.41039 5.91716
14 5WRI A3P 0.006608 0.40489 5.91716
15 3FVQ ATP 0.002892 0.41863 6.50888
16 4GBM A3P 0.004277 0.41488 6.50888
17 4TMK T5A 0.01482 0.40337 6.50888
18 3B5J 12D 0.00004146 0.43329 7.10059
19 2ORV 4TA 0.002318 0.42995 7.10059
20 4IOK ADP 0.00444 0.42052 7.10059
21 4IOK XPO 0.003509 0.42035 7.10059
22 2GCE RFC 0.02785 0.40046 7.10059
23 4PX9 ADP 0.0001023 0.4325 7.69231
24 5J1S ATP 0.002393 0.42766 7.69231
25 1XX6 ADP 0.0009414 0.40188 7.69231
26 1U0J ADP 0.00009654 0.43023 8.28402
27 4HSE ADP 0.0005098 0.42311 8.28402
28 2IS6 ADP 0.0004552 0.41759 8.28402
29 4YDS ATP 0.0001883 0.41577 8.28402
30 3DZD ADP 0.002027 0.41393 8.28402
31 5EP2 AZU 0.007152 0.40161 8.28402
32 1F2U ATP 0.001967 0.43473 8.72483
33 2D7D ADP 0.0003917 0.41933 8.87574
34 1T8U UAP SGN IDS SGN 0.02311 0.4007 8.87574
35 1JWY ADP 0.000737 0.41726 9.46746
36 1L2T ATP 0.002101 0.43014 10.0592
37 3NHB ADP 0.00001636 0.43305 11.2426
38 1JJV ATP 0.00007534 0.42633 11.2426
39 2B8T THM 0.002695 0.42184 11.2426
40 5N69 ADP 0.000995 0.42447 11.5578
41 2GMV UN8 0.003268 0.42647 11.8343
42 1G41 ADP 0.0006359 0.42723 12.426
43 1OFH ADP 0.001189 0.41653 12.426
44 3RC3 ANP 0.0006241 0.4036 13.0178
45 2PL3 ADP 0.0002149 0.42269 14.2012
46 2JLR ANP 0.0006717 0.43106 15.3846
47 2ZE7 DST 0.004264 0.41981 15.3846
48 2ZE7 AMP 0.003931 0.41981 15.3846
49 4WZ6 ATP 0.0001072 0.41368 15.3846
50 2WHX ADP 0.0001165 0.41168 15.3846
51 1R0X ATP 0.0004577 0.40696 15.9763
52 5M7P ADP 0.003278 0.41433 17.1598
53 3RLF ANP 0.002745 0.4233 17.7515
54 1W0J ADP BEF 0.004161 0.40987 17.7515
55 1NY5 ADP 0.005044 0.40162 18.3432
56 1R6B ADP 0.0004945 0.42554 21.8935
57 1W5T ANP 0.003854 0.41324 28.4024
58 1KK8 BEF ADP 0.00104 0.42941 30.7692
59 1B7T ADP 0.001693 0.40984 30.7692
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