Receptor
PDB id Resolution Class Description Source Keywords
4V36 2.1 Å NON-ENZYME: OTHER THE STRUCTURE OF L-PGS FROM BACILLUS LICHENIFORMIS BACILLUS LICHENIFORMIS TRANSFERASE T-RNA DEPENDENT AMINOACYLATION BACTERIAL RESISPROTEINS L-PGS LIPID HOMEOSTASIS YFIX PHENIX. MR_ROSETTLYSINE AMIDE
Ref.: STRUCTURES OF TWO BACTERIAL RESISTANCE FACTORS MEDI TRNA-DEPENDENT AMINOACYLATION OF PHOSPHATIDYLGLYCER LYSINE OR ALANINE. PROC.NATL.ACAD.SCI.USA V. 112 10691 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
TRS A:1852;
B:1849;
Invalid;
Invalid;
none;
none;
submit data
122.143 C4 H12 N O3 C(C(C...
LYN A:1851;
Valid;
none;
submit data
146.211 C6 H16 N3 O C(CC[...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4V36 2.1 Å NON-ENZYME: OTHER THE STRUCTURE OF L-PGS FROM BACILLUS LICHENIFORMIS BACILLUS LICHENIFORMIS TRANSFERASE T-RNA DEPENDENT AMINOACYLATION BACTERIAL RESISPROTEINS L-PGS LIPID HOMEOSTASIS YFIX PHENIX. MR_ROSETTLYSINE AMIDE
Ref.: STRUCTURES OF TWO BACTERIAL RESISTANCE FACTORS MEDI TRNA-DEPENDENT AMINOACYLATION OF PHOSPHATIDYLGLYCER LYSINE OR ALANINE. PROC.NATL.ACAD.SCI.USA V. 112 10691 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4V36 - LYN C6 H16 N3 O C(CC[NH3+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4V36 - LYN C6 H16 N3 O C(CC[NH3+]....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4V36 - LYN C6 H16 N3 O C(CC[NH3+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: LYN; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 LYN 1 1
2 LYS 0.612903 0.741935
3 AAR 0.405405 0.764706
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4V36; Ligand: LYN; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4v36.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
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