Receptor
PDB id Resolution Class Description Source Keywords
4ZO3 1.67 Å EC: 7.-.-.- AIDC, A DIZINC QUORUM-QUENCHING LACTONASE, IN COMPLEX WITH A N-HEXNOYL-L-HOMOSERINE CHRYSEOBACTERIUM SP. STRB126 QUORUM-QUENCHING N-ACYL-L-HOMOSERINE LACTONASE DIZINC AIHYDROLASE
Ref.: STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF AIDC QUORUM-QUENCHING LACTONASE WITH ATYPICAL SELECTIVIT BIOCHEMISTRY V. 54 4342 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ZN A:402;
A:401;
B:401;
B:402;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
C6L A:403;
B:403;
Valid;
Valid;
none;
none;
submit data
217.262 C10 H19 N O4 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4ZO3 1.67 Å EC: 7.-.-.- AIDC, A DIZINC QUORUM-QUENCHING LACTONASE, IN COMPLEX WITH A N-HEXNOYL-L-HOMOSERINE CHRYSEOBACTERIUM SP. STRB126 QUORUM-QUENCHING N-ACYL-L-HOMOSERINE LACTONASE DIZINC AIHYDROLASE
Ref.: STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF AIDC QUORUM-QUENCHING LACTONASE WITH ATYPICAL SELECTIVIT BIOCHEMISTRY V. 54 4342 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 4ZO3 - C6L C10 H19 N O4 CCCCCC(=O)....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 271 families.
1 4ZO3 - C6L C10 H19 N O4 CCCCCC(=O)....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 223 families.
1 4ZO3 - C6L C10 H19 N O4 CCCCCC(=O)....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: C6L; Similar ligands found: 8
No: Ligand ECFP6 Tc MDL keys Tc
1 C6L 1 1
2 1K4 0.813953 0.975
3 CYK 0.704545 0.9
4 C4L 0.682927 0.923077
5 EPM 0.54717 0.755556
6 16E 0.5 0.725
7 SN0 0.458333 0.794872
8 KKA 0.4 0.72093
Similar Ligands (3D)
Ligand no: 1; Ligand: C6L; Similar ligands found: 7
No: Ligand Similarity coefficient
1 HL6 0.8931
2 DSD 0.8846
3 SUO 0.8832
4 A7K 0.8783
5 C9M 0.8681
6 DDK 0.8559
7 DDW 0.8548
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4ZO3; Ligand: C6L; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4zo3.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 4ZO3; Ligand: C6L; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4zo3.bio3) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 4ZO3; Ligand: C6L; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 4zo3.bio3) has 17 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 4ZO3; Ligand: C6L; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 4zo3.bio1) has 17 residues
No: Leader PDB Ligand Sequence Similarity
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