Receptor
PDB id Resolution Class Description Source Keywords
5BXQ 2.5 Å EC: 3.-.-.- STRUCTURE OF THE NTF2:RANGDP COMPLEX RATTUS NORVEGICUS NUCLEAR TRANSPORT RANGDP NTF2 TRANSPORT PROTEIN
Ref.: STRUCTURAL BASIS FOR MOLECULAR RECOGNITION BETWEEN TRANSPORT FACTOR 2 (NTF2) AND THE GDP-BOUND FORM OF RAS-FAMILY GTPASE RAN. J. MOL. BIOL. V. 277 635 1998
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG E:301;
D:302;
C:302;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
GDP E:303;
C:301;
D:301;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
443.201 C10 H15 N5 O11 P2 c1nc2...
SO4 E:302;
Invalid;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5BXQ 2.5 Å EC: 3.-.-.- STRUCTURE OF THE NTF2:RANGDP COMPLEX RATTUS NORVEGICUS NUCLEAR TRANSPORT RANGDP NTF2 TRANSPORT PROTEIN
Ref.: STRUCTURAL BASIS FOR MOLECULAR RECOGNITION BETWEEN TRANSPORT FACTOR 2 (NTF2) AND THE GDP-BOUND FORM OF RAS-FAMILY GTPASE RAN. J. MOL. BIOL. V. 277 635 1998
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 218 families.
1 5BXQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1A2K - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 176 families.
1 5BXQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1A2K - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 143 families.
1 5BXQ - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
2 1A2K - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GDP; Similar ligands found: 153
No: Ligand ECFP6 Tc MDL keys Tc
1 GDP 1 1
2 GTP 0.909091 1
3 GP3 0.881579 0.973684
4 GNH 0.858974 0.986667
5 GNP 0.839506 0.973684
6 G 0.828947 0.986486
7 5GP 0.828947 0.986486
8 G1R 0.82716 0.986667
9 GCP 0.82716 0.973684
10 GSP 0.817073 0.948718
11 GAV 0.797619 0.961039
12 GMV 0.792683 0.973684
13 G2P 0.77381 0.961039
14 G2R 0.770115 0.961039
15 GDP MG 0.759036 0.923077
16 GP2 0.756098 0.961039
17 GDP BEF 0.75 0.9
18 GDD 0.747253 0.961039
19 GKE 0.747253 0.961039
20 GDC 0.747253 0.961039
21 GPG 0.741573 0.961039
22 G3D 0.732558 0.986486
23 ALF 5GP 0.729412 0.888889
24 Y9Z 0.728261 0.902439
25 GTP MG 0.724138 0.923077
26 BEF GDP 0.724138 0.888889
27 G5P 0.723404 0.973684
28 GFB 0.72043 0.961039
29 GTG 0.72043 0.936709
30 GDR 0.72043 0.961039
31 G4P 0.715909 0.986486
32 GCP G 0.715909 0.935065
33 6CK 0.712766 0.936709
34 G3A 0.712766 0.973684
35 GDP ALF 0.7 0.888889
36 GDP AF3 0.7 0.888889
37 YGP 0.698925 0.901235
38 JB2 0.697917 0.961039
39 GKD 0.697917 0.961039
40 GDX 0.690722 0.973684
41 GPD 0.690722 0.925
42 GMP 0.684211 0.88
43 0O2 0.666667 0.986486
44 G G 0.659574 0.935065
45 JB3 0.656863 0.948718
46 NGD 0.650485 0.961039
47 GDP 7MG 0.636364 0.911392
48 DGI 0.636364 0.923077
49 U2G 0.634615 0.936709
50 GPX 0.634409 0.946667
51 IDP 0.632184 0.972973
52 2MD 0.632075 0.891566
53 CAG 0.62963 0.880952
54 CG2 0.622642 0.936709
55 FEG 0.619048 0.879518
56 MGD 0.614679 0.891566
57 ZGP 0.613208 0.869048
58 GH3 0.612903 0.973333
59 3GP 0.611765 0.946667
60 MD1 0.607143 0.891566
61 PGD 0.59292 0.925
62 DGT 0.591398 0.923077
63 BGO 0.588785 0.924051
64 TPG 0.582609 0.840909
65 DBG 0.582609 0.948718
66 2GP 0.574713 0.96
67 FE9 0.570175 0.776596
68 I2C FE2 CMO CMO 0.566372 0.808989
69 G A A A 0.553571 0.923077
70 MGP 0.553191 0.961039
71 U A G G 0.548673 0.935065
72 G4M 0.548387 0.880952
73 6G0 0.547368 0.961039
74 G1R G1R 0.542373 0.924051
75 P2G 0.527473 0.883117
76 PGD O 0.525 0.850575
77 ADP 0.522222 0.92
78 GGM 0.517544 0.901235
79 DG 0.516484 0.910256
80 DGP 0.516484 0.910256
81 P1G 0.516129 0.871795
82 G G U 0.509259 0.935065
83 G1G 0.508475 0.925
84 IMP 0.505495 0.959459
85 G C 0.504348 0.9
86 GPC 0.491525 0.879518
87 G7M 0.483871 0.948052
88 6AD 0.479592 0.841463
89 ATP 0.473684 0.92
90 G2Q 0.471154 0.961039
91 U G A 0.469697 0.888889
92 5FA 0.46875 0.92
93 AQP 0.46875 0.92
94 GTA 0.468468 0.936709
95 7DD 0.468085 0.906667
96 G G G RPC 0.466102 0.875
97 SGP 0.463158 0.82716
98 01G 0.462963 0.902439
99 B4P 0.457447 0.894737
100 AP5 0.457447 0.894737
101 A2D 0.456522 0.894737
102 G G G C 0.455285 0.9125
103 ACQ 0.454545 0.896104
104 5GP 5GP 0.454545 0.883117
105 ANP 0.454545 0.896104
106 A G C C 0.451613 0.911392
107 APC G U 0.45082 0.886076
108 G U34 0.449153 0.888889
109 DG DG 0.448598 0.865854
110 ITT 0.447917 0.868421
111 BA3 0.446809 0.894737
112 35G 0.444444 0.933333
113 C2E 0.444444 0.921053
114 PCG 0.444444 0.933333
115 MGO 0.441176 0.864198
116 AN2 0.4375 0.907895
117 G C C C 0.4375 0.924051
118 M33 0.43299 0.883117
119 UCG 0.429688 0.911392
120 A G U 0.42963 0.888889
121 ACP 0.428571 0.896104
122 MGQ 0.424528 0.935897
123 7DT 0.424242 0.906667
124 APR 0.424242 0.894737
125 AR6 0.424242 0.894737
126 93A 0.42268 0.833333
127 A4P 0.420168 0.869048
128 SAP 0.42 0.873418
129 AD9 0.42 0.896104
130 AGS 0.42 0.873418
131 G8D 0.42 0.875
132 CA0 0.418367 0.896104
133 ATF 0.417476 0.884615
134 AGO 0.414634 0.888889
135 NIA 0.413043 0.82716
136 MGV 0.412844 0.890244
137 TAT 0.411765 0.884615
138 A1R 0.411215 0.839506
139 ADQ 0.411215 0.871795
140 RGT 0.410714 0.909091
141 CGP 0.409836 0.86747
142 AMP 0.408602 0.893333
143 A 0.408602 0.893333
144 UP5 0.40678 0.873418
145 C2R 0.406593 0.906667
146 AMZ 0.406593 0.918919
147 JBT 0.405882 0.778947
148 A22 0.40566 0.907895
149 25L 0.405405 0.907895
150 ADX 0.40404 0.809524
151 8OD 0.401961 0.946667
152 4TC 0.4 0.851852
153 50T 0.4 0.883117
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5BXQ; Ligand: GDP; Similar sites found: 413
This union binding pocket(no: 1) in the query (biounit: 5bxq.bio1) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3IUY AMP 0.00229 0.42276 2.3622
2 2Y65 ADP 0.000001125 0.5081 2.77778
3 5EP2 AZU 0.01246 0.40506 2.77778
4 2F5X ASP 0.01193 0.41213 3.14961
5 4V03 ADP 0.000008193 0.52649 3.24074
6 2OFW ADX 0.0001379 0.52493 3.36538
7 3P4X ADP 0.00001694 0.50479 3.7037
8 4P32 ADP 0.0001499 0.4206 3.7037
9 1W5T ADP 0.001587 0.41048 3.7037
10 1W5T ANP 0.0007225 0.40961 3.7037
11 1JJV ATP 0.00002582 0.54522 3.8835
12 1GOJ ADP 0.0000001134 0.68279 3.93701
13 2VVG ADP 0.0000001414 0.67589 3.93701
14 5KSZ GCP 0.000002121 0.55386 3.93701
15 3BFV ADP 0.00001868 0.53182 3.93701
16 2JLR ANP 0.0001661 0.45764 3.93701
17 1FP6 ADP 0.000007248 0.51594 4.16667
18 3BER AMP 0.001992 0.43658 4.16667
19 1XX6 ADP 0.00007097 0.52672 4.18848
20 4TMK T5A 0.008135 0.42995 4.22535
21 5J1J ANP 0.00001038 0.46163 4.5614
22 3KJI ADP 0.0004319 0.49992 4.62963
23 4FCW ADP 0.0004001 0.46358 4.62963
24 1L2T ATP 0.0001713 0.4061 4.62963
25 3B5J 12D 0.000006805 0.56963 4.72441
26 3ZFD ANP 0.00001501 0.51477 4.72441
27 1B7T ADP 0.0001895 0.46711 4.72441
28 1KK8 BEF ADP 0.00007729 0.46087 4.72441
29 3DZD ADP 0.0001749 0.46017 4.72441
30 2ZJ5 ADP 0.0103 0.41504 4.72441
31 2X7I CIT 0.00747 0.40956 4.72441
32 4WOP CTP 0.00105 0.40569 4.88889
33 2AWN ADP 0.00000006144 0.72056 5.09259
34 5L3W GDP 0.0000008807 0.56911 5.09259
35 5FTB ANP 0.00008942 0.48191 5.09259
36 5FHD ADP ALF 0.00003283 0.45524 5.09259
37 1BO4 COA 0.005069 0.41749 5.35714
38 3NHB ADP 0.00000337 0.59389 5.51181
39 4ZKD GDP 0.0000000005969 0.56626 5.51181
40 1V8K ANP 0.00001143 0.54183 5.51181
41 5I34 GDP 0.00002036 0.5228 5.51181
42 5XDR ADP 0.00005481 0.50311 5.51181
43 4A4Z ANP 0.004541 0.41974 5.51181
44 2NAD NAD 0.0251 0.4087 5.51181
45 4J0Q GDP 0.0000000000617 0.80381 5.55556
46 3LRE ADP 0.0000003408 0.65746 5.55556
47 5GVR LMR 0.00001462 0.58498 5.55556
48 4RZ3 ADP 0.000006971 0.50654 5.55556
49 4IEE AGS 0.0001736 0.49292 5.55556
50 1VHT BA3 0.0002674 0.46276 5.55556
51 2G2Y MLI 0.005531 0.43056 5.55556
52 4R2I ANP 0.0002538 0.49177 5.71429
53 1Y63 ADP 0.000001519 0.58299 5.97826
54 3H4S ADP 0.0000002761 0.65611 6.01852
55 3COB ADP 0.0000001833 0.5355 6.01852
56 4FRZ ADP 0.0000007872 0.52944 6.01852
57 2DPY ADP 0.0001036 0.51105 6.01852
58 3B7G ANP 0.0002271 0.47485 6.01852
59 3T34 GDP 0.00001285 0.46289 6.01852
60 4IDN GNP 0.0003357 0.41379 6.01852
61 3QKT ANP 0.0001121 0.41323 6.01852
62 3E70 GDP 0.0000003404 0.60415 6.29921
63 1G3Q ADP 0.000008529 0.5401 6.29921
64 4MKF AP5 0.0006754 0.49248 6.29921
65 5G41 AP5 0.000992 0.4883 6.29921
66 3ZQ6 ADP ALF 0.00001568 0.43427 6.29921
67 5M7P ADP 0.0003907 0.42662 6.29921
68 5E5U MLI 0.007671 0.40749 6.29921
69 2CBZ ATP 0.00000103 0.63149 6.48148
70 4PX9 ADP 0.00002943 0.53007 6.48148
71 4U00 ADP 0.0000001737 0.51131 6.48148
72 5X40 ACP 0.0001613 0.49872 6.48148
73 1R0X ATP 0.0001895 0.46135 6.48148
74 1IN4 ADP 0.00007221 0.45253 6.48148
75 1YTM ATP 0.000126 0.44098 6.48148
76 2BEK ATP 0.0001948 0.42568 6.48148
77 3RLF ANP 0.0002046 0.41131 6.48148
78 3WY9 GDP 0.00000000003697 0.81454 6.94444
79 3WYA GDP 0.0000000001035 0.77865 6.94444
80 3CNL GNP 0.0000000007104 0.75266 6.94444
81 5L3V GDP 0.0000003028 0.58965 6.94444
82 3DC4 ADP 0.000002996 0.58728 6.94444
83 2ZFI ADP 0.00001453 0.53694 6.94444
84 5L3S GNP 0.000001061 0.48595 6.94444
85 5VGR GDP 0.000279 0.44058 6.94444
86 4GOX A3P 0.0002643 0.41062 6.94444
87 2PZE ATP 0.000002114 0.61215 7.08661
88 5BQ5 ADP BEF 0.00007537 0.48459 7.08661
89 2CHG ANP 0.00007205 0.46458 7.08661
90 2ZPA ADP 0.00008068 0.45004 7.08661
91 2FNA ADP 0.00002665 0.44866 7.08661
92 2WOJ ADP ALF 0.00002067 0.43083 7.08661
93 3ZS9 ADP ALF 0.00002248 0.43069 7.08661
94 4BQS ADP 0.00001031 0.54393 7.38636
95 2OM2 GDP 0.00000001612 0.58758 7.40741
96 1Y3A GDP 0.00000001313 0.56534 7.40741
97 1SVK ALF GDP 0.000000006698 0.51474 7.40741
98 1BH2 GSP 0.00000002007 0.51171 7.40741
99 3TBK ANP 0.00054 0.47552 7.40741
100 2FSH ANP 0.0008829 0.45886 7.40741
101 2QZ4 ADP 0.00005465 0.49066 7.87037
102 2ZE7 AMP 0.00373 0.43687 7.87037
103 2ZE7 DST 0.004019 0.43687 7.87037
104 3AB3 GDP 0.000000003523 0.71473 7.87402
105 1ZCB GDP 0.00000001477 0.69746 7.87402
106 2XTZ GSP 0.000000002442 0.56568 7.87402
107 4WZ6 ATP 0.0000128 0.5632 7.87402
108 5LTJ ADP 0.00003741 0.51071 7.87402
109 4HSE ADP 0.00006082 0.50104 7.87402
110 1UKZ ADP 0.0003125 0.50025 7.87402
111 3BOS CDP 0.0001065 0.49633 7.87402
112 5LTJ BEF 0.001477 0.47054 7.87402
113 3KTA AP5 0.0001554 0.4592 7.87402
114 1KO8 6PG 0.00006054 0.45618 7.87402
115 1OE0 TTP 0.002852 0.44409 7.87402
116 4IOK ADP 0.01131 0.44339 7.87402
117 4IOK XPO 0.009314 0.44339 7.87402
118 4QRH 0O2 0.004589 0.42564 7.87402
119 5K5Z ANP 0.0001129 0.42154 7.87402
120 2J5V PCA 0.02701 0.41036 7.87402
121 3R96 ACO 0.03067 0.40528 7.87402
122 3R96 AMP 0.03067 0.40528 7.87402
123 5KUT GDP 0.00000001259 0.66972 7.93651
124 3FWY ADP 0.000002505 0.57421 8.33333
125 4YMU ATP 0.000005897 0.56373 8.33333
126 1AZT GSP 0.000000004881 0.52711 8.33333
127 2VF7 ADP 0.0001364 0.48499 8.33333
128 1XMV ADP 0.04976 0.43013 8.33333
129 4PJ3 ANP 0.001215 0.42458 8.33333
130 4TTQ ATP 0.00002546 0.5255 8.37209
131 2WJG GDP 0.000000001374 0.7259 8.51064
132 1G7C 5GP 0.00000001372 0.67899 8.51064
133 3WXM GTP 0.000000001213 0.74981 8.66142
134 1SKQ GDP 0.0000000009729 0.74607 8.66142
135 2C77 GNP 0.000000001182 0.73715 8.66142
136 2W58 ADP 0.0000008533 0.64058 8.66142
137 2C78 GNP 0.0000000002923 0.62881 8.66142
138 5H56 ADP 0.00003835 0.54038 8.66142
139 5H56 TYD 0.00003835 0.54038 8.66142
140 3EZ2 ADP 0.00007495 0.51051 8.66142
141 5IFS ADP 0.00004725 0.50907 8.66142
142 1XKV ATP 0.00002901 0.50207 8.66142
143 5GJC ATP 0.00009195 0.49931 8.66142
144 2PL3 ADP 0.000154 0.49543 8.66142
145 4XTR ADP 0.00001457 0.48479 8.66142
146 4XTR ATP 0.00002075 0.45336 8.66142
147 4XVU ATP 0.00002318 0.45187 8.66142
148 2FAH GDP 0.0005046 0.44295 8.66142
149 3PQC GDP 0.00000001705 0.64326 8.71795
150 4QM7 GTP 0.00001246 0.54008 8.77193
151 4QOS ADP 0.0001218 0.47513 8.7963
152 2WJH GDP 0.000000003046 0.69793 9.03614
153 2WJH FLC 0.000001269 0.58151 9.03614
154 1PUJ GNP 0.000000001603 0.66771 9.25926
155 4NON GDP 0.000000003109 0.53383 9.25926
156 1U0J ADP 0.0001179 0.50101 9.25926
157 4PPF FLC 0.0000009604 0.63991 9.44882
158 1NRJ GTP 0.000000005677 0.60282 9.44882
159 3VMF GTP 0.0000000009526 0.57244 9.44882
160 2ZR9 DTP 0.00003847 0.51709 9.44882
161 4R43 GDP 0.000175 0.48618 9.44882
162 4YS0 ADP 0.001028 0.41867 9.44882
163 4HI0 GDP 0.00000002175 0.5797 9.54774
164 2QN6 GDP 0.00000000004068 0.81253 9.72222
165 4LPS GDP 0.00000004431 0.64469 9.72222
166 4RD0 GDP 0.00000000021 0.63347 9.72222
167 2WHX ADP 0.00001573 0.55904 9.72222
168 1ION ADP 0.00001609 0.51442 9.72222
169 5KSP GDP 0.0000008499 0.58596 10
170 5TSH ADP 0.000008178 0.57297 10.1852
171 5TSH ANP 0.00001431 0.53726 10.1852
172 4D81 ADP 0.00006186 0.47672 10.1852
173 1YRB GDP 0.000000000003258 0.77575 10.2362
174 3A4M ADP 0.000003333 0.58499 10.2362
175 3DKP ADP 0.0001404 0.49068 10.2362
176 2XAU ADP 0.00005407 0.49006 10.2362
177 5MZN ADP 0.0005504 0.47511 10.2362
178 1FNN ADP 0.00004324 0.46043 10.2362
179 3Q9L ATP 0.0001785 0.44946 10.2362
180 3FVQ ATP 0.0001995 0.42692 10.2362
181 2HCJ GDP 0.00000000001384 0.8351 10.6481
182 3U6B GDP 0.00000000002 0.8274 10.6481
183 4G5G GDP 0.00000000006156 0.78924 10.6481
184 5JBQ GDP 0.00000000006452 0.78828 10.6481
185 3U6K GDP 0.0000000001531 0.77066 10.6481
186 1D8T GDP 0.00000000005342 0.75823 10.6481
187 4P3Y GDP 0.00000000002221 0.75393 10.6481
188 2BVN GNP 0.0000000001862 0.7069 10.6481
189 4PC3 GDP 0.000000001316 0.67198 10.6481
190 2IS6 ADP 0.00004769 0.5127 10.6481
191 4XGU ADP 0.00004487 0.47476 10.6481
192 1FQJ GDP 0.000000005029 0.57599 10.8844
193 1FQJ ALF 0.01948 0.40086 10.8844
194 2OG2 MLI 0.000003452 0.6086 11.0236
195 5MVR ADP 0.00001713 0.53358 11.0236
196 2Q2Y ADP 0.0001629 0.52256 11.0236
197 2Q2Y MKR 0.0001659 0.52087 11.0236
198 3UIE ANP 0.00001223 0.51849 11.0236
199 3H86 AP5 0.000243 0.50712 11.0236
200 5IRR GSP 0.000001402 0.50038 11.0236
201 5H67 ATP 0.002425 0.42774 11.0236
202 5MEX SZZ 0.02993 0.40582 11.0236
203 2WZF BGC 0.01699 0.40304 11.0236
204 5MEX PAP 0.01314 0.40216 11.0236
205 3ZIA ADP 0.00003372 0.51872 11.1111
206 3ZIA ATP 0.00003216 0.51372 11.1111
207 1M7G ADX 0.00001971 0.55636 11.3744
208 1M7G AV2 0.000001129 0.55381 11.3744
209 1M7G ADP 0.00002353 0.54895 11.3744
210 5KDO GDP 0.00000002918 0.57919 11.5741
211 2FH5 GTP 0.000000000381 0.63737 11.811
212 1LVG ADP 0.0000006253 0.62099 11.811
213 3B9Q MLI 0.00001125 0.57582 11.811
214 4H1V GNP 0.000001333 0.53715 11.811
215 1BG2 ADP 0.0000003145 0.50802 11.811
216 4JLV ADP 0.0002409 0.48606 11.811
217 5L3R GCP 0.000001305 0.48354 11.811
218 1IHU AF3 0.000003816 0.48273 11.811
219 1IHU ADP 0.000004306 0.47167 11.811
220 3CIF G3H 0.02859 0.40584 11.811
221 3CIF NAD 0.02291 0.40395 11.811
222 2VOH CIT 0.005957 0.40069 11.811
223 5GOE GDP 0.000000002514 0.67981 12.037
224 2XT3 ADP 0.000000162 0.6681 12.037
225 3DEF GDP 0.0000006402 0.56044 12.037
226 1SQ5 ADP 0.0001086 0.48951 12.037
227 4CVN ADP 0.00000532 0.57493 12.4088
228 2IYL GDP 0.0000005355 0.60426 12.5
229 1OXV ANP 0.00001584 0.50266 12.5
230 1H65 GDP 0.00000154 0.50019 12.5
231 3IO3 ADP 0.002179 0.46877 12.5
232 1NY5 ADP 0.0004486 0.43248 12.5
233 2RCN GDP 0.000000000009773 0.82677 12.5984
234 1JI0 ATP 0.00000748 0.56759 12.5984
235 4YDS ATP 0.00001266 0.55628 12.5984
236 4LYA ATP 0.000007308 0.54318 12.5984
237 2ODE ALF GDP 0.000000006158 0.52457 12.5984
238 5IRN ADP 0.000008006 0.51295 12.5984
239 1Z6T ADP 0.0001062 0.45535 12.5984
240 5AHO TLA 0.01163 0.41409 12.5984
241 1AQU A3P 0.009678 0.40652 12.5984
242 5HCN GCP 0.00000000005955 0.77617 12.963
243 1DAR GDP 0.000000001733 0.72118 12.963
244 4NCN GTP 0.00000000023 0.61563 12.963
245 4TMZ GSP 0.0000000002212 0.6156 12.963
246 3TK1 GDP 0.00000000001583 0.8487 13.3858
247 1G6H ADP 0.0000002065 0.67754 13.3858
248 5WRJ A3P 0.002665 0.44225 13.3858
249 5FG3 GDP 0.000000000006797 0.77469 13.4259
250 4E03 ADP 0.000008544 0.54007 13.5922
251 1TQ4 GDP 0.0000000004594 0.63493 13.8889
252 1F9V ADP 0.0000005929 0.63104 14.1732
253 1NJF ADP 0.00002685 0.52872 14.1732
254 3CX8 GSP 0.000000004806 0.52761 14.1732
255 1NJF AGS 0.00006017 0.51697 14.1732
256 5I0H ADP BEF 0.00008202 0.5083 14.1732
257 2GK6 ADP 0.0006763 0.47068 14.1732
258 4B47 GDP 0.000000000001927 0.87638 14.3519
259 1JJ7 ADP 0.0000001904 0.67939 14.3519
260 5M04 GDP 0.000000000009718 0.84251 14.8148
261 2OBM ADP 0.0001971 0.50606 14.9606
262 4DCT GDP 0.0000000001017 0.76553 15.2778
263 5LB3 ADP 0.0001016 0.50414 15.748
264 3RC3 ANP 0.001309 0.45062 15.748
265 2HF9 GSP 0.00000006908 0.51939 16.5354
266 2D7D ADP 0.0004926 0.4512 16.5354
267 1OYY AGS 0.00588 0.41446 16.5354
268 5J1S ATP 0.0001389 0.41902 17.0732
269 5CK5 GDP 0.00000000003246 0.81726 17.3228
270 5N69 ADP 0.0001053 0.46667 17.3228
271 4LJ9 ACP 0.0006813 0.45846 17.3228
272 1KK1 GNP 0.000000000345 0.76778 18.1102
273 2C04 GCP 0.000006403 0.51143 18.1102
274 3IIJ ADP 0.000004772 0.55965 18.3333
275 4R98 GNH 0.00000002703 0.66515 18.8192
276 3W5J GDP 0.0000002135 0.65301 18.8976
277 4PFO ADP 0.0001992 0.49827 18.8976
278 2VB6 ADP BEF 0.0001305 0.41813 18.8976
279 4ZG4 VO4 ADP 0.0001016 0.42139 18.9815
280 5HR5 ADP 0.0001376 0.45041 19.4444
281 2X77 GDP 0.0000000002298 0.74932 19.5767
282 1WDT GTP 0.0000001418 0.56193 19.9074
283 2V7Q ATP 0.00001045 0.52183 20.4724
284 1W0J ADP 0.00001601 0.50185 20.4724
285 2V7Q ADP 0.0001979 0.48368 20.4724
286 1W0J ADP BEF 0.0004027 0.42764 20.4724
287 2CK3 ANP 0.0004411 0.42645 20.4724
288 2CK3 ADP 0.0004281 0.4048 20.4724
289 1CS4 GSP 0.00000000694 0.5331 20.7547
290 3DOE GTP 0.00000000007413 0.63056 20.8333
291 2KIN ADP 0.0000002607 0.51006 21
292 1UPT GTP 0.000000000249 0.62773 21.0526
293 3AQ4 GDP 0.000000000208 0.7513 21.1957
294 4M9Q GNP 0.0000000001039 0.64239 21.2963
295 1KSH GDP 0.00000000002527 0.81608 21.5054
296 1F6B GDP 0.0000000008327 0.72372 21.7172
297 1D2E GDP 0.000000001452 0.66999 21.7593
298 1T5C ADP 0.0000006104 0.64299 22.0472
299 2ZPT A3P 0.04396 0.40934 22.0472
300 1MR3 G3D 0.00000000004519 0.78166 22.0994
301 1HTW ADP 0.000008387 0.54044 22.1519
302 1MKY GDP 0.00000000002737 0.80577 22.2222
303 1O3Y GTP 0.0000000001925 0.61936 22.2892
304 2J59 GTP 0.0000000001984 0.61867 22.2892
305 1J2J GTP 0.0000000002709 0.61414 22.2892
306 4YLG GDP 0.0000000001312 0.68955 22.5434
307 1G7S GDP 0.0000000002692 0.74617 22.8346
308 4KAX GTP 0.0000000002054 0.63387 23.0769
309 1RE0 GDP 0.00000000002174 0.75463 23.1707
310 1S9D GDP 0.0000000003195 0.74277 23.1707
311 2A5F GTP 0.00000000123 0.58398 23.4286
312 2WIC GNP 0.000000009406 0.67551 23.6111
313 3EWA ANP 0.00003218 0.52073 23.622
314 3FYH ADP 0.0001458 0.40797 23.622
315 3QF7 ANP 0.0002131 0.43376 24
316 3PCR GTP 0.0000000003034 0.61241 24.0741
317 3N5C GDP 0.0000000001781 0.76758 24.6914
318 2W83 GTP 0.0000000002816 0.61489 24.8485
319 4ZNL BEF ADP 0.0002148 0.47595 25.9843
320 3A1S GDP 0.000000142 0.62154 26.3889
321 1M2O GNP 0.000000003646 0.5576 27.3684
322 4ZI2 GNP 0.00000000006005 0.64826 28.4211
323 4GOJ GNP 0.00000000004362 0.65302 28.5714
324 2QTV GNP 0.000000003088 0.57032 28.7425
325 2WKQ GTP 0.000000004823 0.57311 29.1667
326 1FZQ GDP 0.00000000001423 0.8191 29.2818
327 3T1O GDP 0.000000008036 0.66003 29.2929
328 3T12 GDP ALF 0.000000004782 0.59005 29.2929
329 1YZG GDP 0.0000000006051 0.73007 29.6089
330 2J0V GDP 0.0000000009924 0.72023 29.717
331 1ZJ6 G3D 0.0000000002489 0.74773 30.4813
332 5JCP GDP ALF 0.000000006731 0.62849 30.5556
333 4BAS GNP 0.00000001263 0.69177 31.1558
334 1GWN GTP 0.00000007906 0.65087 31.7073
335 2GCN GDP 0.000000002356 0.72642 31.8408
336 2GCO GNP 0.000000002697 0.71287 31.8408
337 1RYH GNP 0.0000000004741 0.73957 32.5123
338 1XTQ GDP 0.0000000006475 0.59917 32.7684
339 1DS6 GDP 0.0000000001268 0.74158 33.3333
340 4V0K GDP 0.000000001178 0.57914 33.7278
341 1I4D GDP 0.0000000001242 0.78916 33.8542
342 5DI3 GNP 0.0000000002287 0.62961 34.0541
343 2W2X GSP 0.00000000799 0.59201 34.0541
344 1E96 GTP 0.000000003261 0.55652 34.375
345 3SBD GNP 0.000000007772 0.54708 34.7594
346 4D0N GDP 0.0000000001027 0.74731 35.1351
347 4DID GDP 0.000000001009 0.7199 35.2332
348 1M7B GTP 0.00000003037 0.57225 35.3261
349 4ITR GDP 0.000000003324 0.61843 35.6021
350 3LXR GDP 0.0000000004952 0.71126 35.6757
351 5HPY GDP 0.000000003926 0.63495 35.6757
352 1G4U GDP 0.000000005003 0.61424 35.8696
353 4XOI GTP 0.000000006553 0.56191 36.1111
354 2FJU GSP 0.0000000009526 0.62558 36.5169
355 4XSH GSP 0.000000003698 0.62163 36.8715
356 3T5G GDP 0.0000000001588 0.73106 37.0166
357 1MH1 GNP 0.000000001896 0.5509 37.0968
358 5EE5 GTP 0.00000000004101 0.65648 37.4269
359 4YC7 GNP 0.00000000433 0.71387 37.5691
360 1HE1 GDP 0.000000001952 0.61206 38.0682
361 1HE1 AF3 0.004872 0.42815 38.0682
362 1R4A GNP 0.0000000001057 0.60966 38.7879
363 1ZD9 GDP 0.000000000541 0.64918 39.3617
364 4DKX GDP 0.00000000001195 0.82267 41.6667
365 2F9L GDP 0.0000000001344 0.6259 42.2111
366 2BCG GDP 0.00000000001 0.7127 42.233
367 4DSU GDP 0.00000000005092 0.59303 42.328
368 2ZEJ GDP 0.0000000008983 0.55625 42.3913
369 1OIX GDP 0.0000000002737 0.58566 42.4084
370 4U5X GNP 0.000000003257 0.71278 42.6966
371 1OIV GDP 0.0000000001448 0.79434 42.9319
372 2CJW GDP 0.000000000003787 0.84611 43.75
373 5TB5 GDP 0.0000000000117 0.77989 43.7838
374 5TAR GDP 0.00000000001 0.75635 43.7838
375 5UQW GDP 0.0000000001165 0.60643 43.9153
376 3CPJ GDP 0.00000000002354 0.80451 43.9815
377 2A9K GDP 0.00000000006637 0.70284 44.9198
378 3TKL GTP 0.00000000004705 0.62252 45.4082
379 1Z06 GNP 0.00000000001957 0.62992 45.5026
380 3Q85 GNP 0.000000000001161 0.83021 45.5621
381 3BC1 GNP 0.00000000009621 0.59797 45.641
382 2EW1 GNP 0.00000000002003 0.82863 46.2687
383 4LX0 BEF GDP 0.0000000001352 0.79896 46.3277
384 1VG8 GNP 0.00000000001423 0.84634 46.3768
385 1VG0 GDP 0.000000000003831 0.77546 46.3768
386 5XCO GDP 0.00000000003565 0.73372 46.7836
387 5JCZ GDP 0.0000000005734 0.6445 46.9274
388 3Q72 GNP 0.00000000003945 0.74462 46.988
389 3RWO GDP 0.000000000261 0.78199 47.027
390 1YZN GNP 0.00000000009605 0.5888 47.027
391 2A5J GDP 0.000000000001472 0.81892 47.1204
392 1X1R GDP 0.00000000007443 0.58859 47.191
393 4K81 GTP 0.0000000005094 0.55507 47.3684
394 2C5L GTP 0.0000000000876 0.58886 47.3988
395 4C4P GNP 0.0000000001321 0.58326 47.3988
396 1ZC3 GNP 0.000000000106 0.80409 47.4286
397 5SZH GNP 0.00000000002872 0.83156 47.7833
398 5O2T GSP 0.0000000001488 0.58285 47.929
399 1UAD GNP 0.0000000002057 0.78698 48
400 5UFQ GNP 0.0000000002309 0.58726 48.1928
401 3SFV GDP 0.0000000000377 0.80787 48.6188
402 2UZI GTP 0.0000000004037 0.58081 48.7952
403 1CLU DBG 0.000000001729 0.44719 48.7952
404 5E95 GDP 0.00000000002522 0.718 48.8095
405 1G16 GDP 0.00000000002391 0.82117 48.8235
406 2HT6 GDP 0.00000000000193 0.87635 48.8506
407 3KUD GDP 0.00000000005075 0.6675 49.3976
408 1U8Z GDP 0.0000000001043 0.62742 49.4048
409 1Z0J GTP 0.0000000001218 0.58933 49.4118
410 1KY3 GDP 0.00000000008231 0.77927 49.4506
411 1YVD GNP 0.00000000005888 0.60821 49.7041
412 5WDR GNP 0.00000000008848 0.59039 49.7076
413 2Y8E GNP 0.0000000005934 0.5774 49.7207
414 3DDC GNP 0.00000000004005 0.59927 50
Pocket No.: 2; Query (leader) PDB : 5BXQ; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5bxq.bio1) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 5BXQ; Ligand: GDP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 5bxq.bio1) has 16 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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