Receptor
PDB id Resolution Class Description Source Keywords
5C0M 1.6 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF SGF29 TANDEM TUDOR DOMAIN IN COMPLEX WI CONTAINING PEPTIDE HOMO SAPIENS SGF29 TANDEM TUDOR DOMAIN CARBA CONTAINING PEPTIDE STRUCTGENOMICS STRUCTURAL GENOMICS CONSORTIUM SGC TRANSCRIPTIO
Ref.: CHEMICAL BASIS FOR THE RECOGNITION OF TRIMETHYLLYSI EPIGENETIC READER PROTEINS. NAT COMMUN V. 6 8911 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 B:301;
A:301;
 Invalid;
Invalid;
 none;
none;
 submit data
96.063 O4 S [O-]S...
UNX A:303;
B:304;
B:303;
A:305;
A:302;
B:305;
A:304;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
none;
none;
 submit data
n/a X *
ALA ARG THR 4WQ GLN THR ALA ARG LYS SER C:1;
D:1;
 Valid;
Valid;
 Atoms found LESS than expected: % Diff = 0.422;
Atoms found LESS than expected: % Diff = 0.566;
 Kd = 1.4 uM
n/a n/a
GOL B:302;
 Invalid;
 none;
 submit data
92.094 C3 H8 O3 C(C(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5C0M 1.6 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF SGF29 TANDEM TUDOR DOMAIN IN COMPLEX WI CONTAINING PEPTIDE HOMO SAPIENS SGF29 TANDEM TUDOR DOMAIN CARBA CONTAINING PEPTIDE STRUCTGENOMICS STRUCTURAL GENOMICS CONSORTIUM SGC TRANSCRIPTIO
Ref.: CHEMICAL BASIS FOR THE RECOGNITION OF TRIMETHYLLYSI EPIGENETIC READER PROTEINS. NAT COMMUN V. 6 8911 2015
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 3MEV - ALA ALA THR M3L GLN THR ALA ARG n/a n/a
2 5C0M Kd = 1.4 uM ALA ARG THR 4WQ GLN THR ALA ARG LYS SER n/a n/a
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 3MEV - ALA ALA THR M3L GLN THR ALA ARG n/a n/a
2 5C0M Kd = 1.4 uM ALA ARG THR 4WQ GLN THR ALA ARG LYS SER n/a n/a
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 3MEV - ALA ALA THR M3L GLN THR ALA ARG n/a n/a
2 5C0M Kd = 1.4 uM ALA ARG THR 4WQ GLN THR ALA ARG LYS SER n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ALA ARG THR 4WQ GLN THR ALA ARG LYS SER; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: ALA ARG THR 4WQ GLN THR ALA ARG LYS SER; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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