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Receptor
PDB id Resolution Class Description Source Keywords
5C9P 1.75 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF RECOMBINANT PLL LECTIN COMPLEXED WITH L FROM PHOTORHABDUS LUMINESCENS AT 1.75 A RESOLUTION PHOTORHABDUS LUMINESCENS LECTIN SEVEN-BLADED BETA-PROPELLER FUCOSE-SPECIFIC SUGAR PROTEIN
Ref.: A NOVEL FUCOSE-BINDING LECTIN FROM PHOTORHABDUS LUM (PLL) WITH AN UNUSUAL HEPTABLADED BETA-PROPELLER TE STRUCTURE. J.BIOL.CHEM. V. 291 25032 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:406;
A:411;
A:404;
A:410;
A:413;
A:405;
A:409;
A:407;
A:408;
A:412;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
FUC A:403;
A:402;
A:401;
Valid;
Valid;
Valid;
none;
none;
none;
submit data
164.156 C6 H12 O5 C[C@H...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5C9P 1.75 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF RECOMBINANT PLL LECTIN COMPLEXED WITH L FROM PHOTORHABDUS LUMINESCENS AT 1.75 A RESOLUTION PHOTORHABDUS LUMINESCENS LECTIN SEVEN-BLADED BETA-PROPELLER FUCOSE-SPECIFIC SUGAR PROTEIN
Ref.: A NOVEL FUCOSE-BINDING LECTIN FROM PHOTORHABDUS LUM (PLL) WITH AN UNUSUAL HEPTABLADED BETA-PROPELLER TE STRUCTURE. J.BIOL.CHEM. V. 291 25032 2016
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 510 families.
1 5C9P - FUC C6 H12 O5 C[C@H]1[C@....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 391 families.
1 5MXG Kd = 4.44 mM FUC GAL NAG n/a n/a
2 6F5W Kd = 149 uM KG1 C9 H14 O5 C[C@H]1[C@....
3 5MXH ic50 = 377.96 mM GAL C6 H12 O6 C([C@@H]1[....
4 5MXF Kd = 0.26 mM MFU C7 H14 O5 C[C@H]1[C@....
5 5C9P - FUC C6 H12 O5 C[C@H]1[C@....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 298 families.
1 5MXG Kd = 4.44 mM FUC GAL NAG n/a n/a
2 6F5W Kd = 149 uM KG1 C9 H14 O5 C[C@H]1[C@....
3 5MXH ic50 = 377.96 mM GAL C6 H12 O6 C([C@@H]1[....
4 5MXF Kd = 0.26 mM MFU C7 H14 O5 C[C@H]1[C@....
5 5C9P - FUC C6 H12 O5 C[C@H]1[C@....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: FUC; Similar ligands found: 9
No: Ligand ECFP6 Tc MDL keys Tc
1 FCB 1 1
2 FUC 1 1
3 FCA 1 1
4 XXR 1 1
5 G6D 1 1
6 RAM 1 1
7 RM4 1 1
8 FUL 1 1
9 FUF 0.424242 0.846154
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: 260
This union binding pocket(no: 1) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 5HTL C2E None
2 3MEH THP None
3 2VBU CDP None
4 5K7K 6RJ 0.787402
5 4MBY BGC SIA GAL 1.07914
6 5F7R GLC GLC 1.31234
7 2ZRU FMN 1.3587
8 2NLI LAC 1.3587
9 2NLI FMN 1.3587
10 2BW7 ECS 1.36986
11 2BW7 APC 1.36986
12 2GMH FAD 1.5748
13 3CV3 UDP 1.5748
14 1CZA G6P 1.5748
15 1ZXM ANP 1.5748
16 4RI1 ACO 1.6129
17 4P86 5GP 1.63934
18 5W3Y ACO 1.70455
19 5TUF FAD 1.71149
20 1KPH 10A 1.74216
21 1KPG SAH 1.74216
22 5EOW FAD 1.83727
23 6FHO FAD 1.83727
24 5JCM FAD 1.83727
25 5JCM ISD 1.83727
26 5JCM NAD 1.83727
27 3KLJ FAD 1.83727
28 5WS9 AMP 1.83727
29 5NMX FAD 1.83727
30 1Q1R FAD 1.83727
31 1IYK MIM 1.83727
32 4A62 ANP 1.875
33 1OVD ORO 1.92926
34 1OVD FMN 1.92926
35 2PID YSA 1.96629
36 2E5A LAQ 2.01729
37 2Q4W FAD 2.09974
38 6BQC LOP 2.09974
39 6ER9 FAD 2.09974
40 6ER9 NAP 2.09974
41 1HV9 UD1 2.09974
42 5EB4 FAD 2.09974
43 4S3R 7SA 2.09974
44 2IID FAD 2.09974
45 1ZPD DPX 2.09974
46 1WDI CIT 2.09974
47 4PLT OXM 2.1148
48 4PLT NAI 2.1148
49 6EJI UD2 2.14477
50 4UTW RFW 2.18341
51 3WG6 NDP 2.28013
52 3OIX FMN 2.31884
53 5C5H 4YB 2.3622
54 4BR5 ANP 2.3622
55 4DP3 MMV 2.3622
56 4DP3 NDP 2.3622
57 2WTX UDP 2.3622
58 4IP7 FBP 2.3622
59 2WTX VDO 2.3622
60 1QDS PGA 2.39044
61 2IU8 PLM 2.40642
62 5DK4 5BX 2.43161
63 5DK4 ATP 2.43161
64 4GV4 MEJ 2.52101
65 3EVF GTA 2.52708
66 4UTG ANP 2.60116
67 3H86 AP5 2.60417
68 3N6M GTP 2.62467
69 1I1E DM2 2.62467
70 4AOA IK2 2.62467
71 3LL5 IPE 2.81124
72 3LL5 ADP 2.81124
73 3LL5 ATP 2.81124
74 3JUK UPG 2.84698
75 2VBF TPP 2.88714
76 1WD4 AHR 2.88714
77 4Z87 GDP 2.88714
78 2BIF SIN 2.88714
79 2BIF ANP 2.88714
80 2VK4 TPP 2.88714
81 1K0E TRP 2.88714
82 5TCI MLI 2.89855
83 5TCI 79V 2.89855
84 1RLZ NAD 2.98103
85 5LPG 71V 3.04878
86 2YC5 6BC 3.07018
87 1KBI PYR 3.14961
88 1KBI FMN 3.14961
89 5CPS GLC GLC GLC GLC GLC GLC GLC GLC GLC 3.14961
90 1KBJ FMN 3.14961
91 5CPS GLC GLC GLC GLC GLC GLC GLC GLC 3.14961
92 2BOY BHO 3.14961
93 2D2I NAP 3.15789
94 5A5W GUO 3.16206
95 3SBD GNP 3.20856
96 4XUC SAM 3.21101
97 4XUC 43G 3.21101
98 1Q6O LG6 3.24074
99 4B4U NAP 3.30033
100 5TVA AMP 3.33333
101 1AL8 DHP 3.34262
102 1AL8 FMN 3.34262
103 3LHS SF8 3.37838
104 3EWP APR 3.38983
105 3U2U UDP 3.42205
106 4MO4 ACP 3.50404
107 5UBG PRT 3.53982
108 1EQ2 NAP 3.54839
109 2B8T THM 3.58744
110 1NWU NAG NAG NAG NDG 3.59116
111 5NUE NAD 3.61446
112 5NUF NAD 3.61446
113 4EHU ANP 3.62319
114 4OR7 NAP 3.63636
115 5Y2C NAG NAG NAG NAG NAG 3.67454
116 1QZR ANP 3.67454
117 4EIL NDP 3.67454
118 3IHG FAD 3.73832
119 1R37 NAD 3.7464
120 4W6Z 8ID 3.7464
121 1TMX BEZ 3.75427
122 5APG EEM 3.78378
123 5JGL SAM 3.80623
124 2POC UD1 3.81471
125 4HKP TKW 3.84615
126 6FDF SAH 3.89222
127 3OH3 UAD 3.93701
128 2UUU FAD 3.93701
129 2UUU PL3 3.93701
130 4J7H TLO 3.93701
131 2PHN GDP 3.93701
132 4J7H TRH 3.93701
133 4MAF ADX 3.93701
134 4CJX NAP 3.93701
135 3Q9O NAD 3.93701
136 1FA2 DOM 3.93701
137 2DX7 CIT 3.94737
138 6GFK SAH 3.98406
139 1EIX BMQ 4.08163
140 2MBR EPU 4.11765
141 2MBR FAD 4.11765
142 1F76 FMN 4.16667
143 5N2D 8J8 4.16667
144 1Z2I NAD 4.18994
145 5BRT FAD 4.19948
146 5BRT CH9 4.19948
147 1QPB PYM 4.19948
148 1QPB TPP 4.19948
149 3EYA TDP 4.19948
150 4ZLU ADP 4.19948
151 4ZLU 4PW 4.19948
152 2Q6B HR2 4.19948
153 5I34 GDP 4.19948
154 3IX9 NDP 4.21053
155 3IQE F42 4.24028
156 1S9A BEZ 4.28016
157 2QQ0 THM 4.34783
158 2QQ0 ANP 4.34783
159 2QQ0 TMP 4.34783
160 2QQ0 ADP 4.34783
161 2ASF CIT 4.37956
162 1SU2 ATP 4.40252
163 1U7Z PMT 4.42478
164 2QXL ATP 4.46194
165 4JEJ 1GP 4.5082
166 1RVV INI 4.54545
167 4L2I FAD 4.56274
168 4L2I NAD 4.56274
169 5KJZ PCG 4.66667
170 3HWW AKG 4.72441
171 4JWH SAH 4.72441
172 4KVG GTP 4.7619
173 1H5Q NAP 4.90566
174 5X9D 80F 4.93421
175 5CUO COA 4.98688
176 5W8X UDP 4.98688
177 1V9N NDP 5
178 2FLI DX5 5
179 3I6B KDO 5
180 4JWF SAH 5.06912
181 3GFB NAD 5.14286
182 1VBI NAD 5.23256
183 6B2M COA 5.24476
184 3WBF NAP 5.2459
185 3UN3 G16 5.24934
186 4UP3 NDP 5.41401
187 4UXH T5A 5.43478
188 3HGM ATP 5.44218
189 4NBI D3Y 5.4878
190 3WCS MAN NAG 5.51181
191 3WCS MAN NAG GAL 5.51181
192 2JHP SAH 5.51181
193 4REL KMP 5.51181
194 2ORV 4TA 5.55556
195 2V58 LZJ 5.56793
196 2QV6 GTP 5.59701
197 4FOJ C2E 5.68182
198 5ZYN FAD 5.77428
199 1NOX FMN 5.85366
200 1TB3 FMN 5.96591
201 4OOP DUP 6.0241
202 2WZM NA7 6.03675
203 5UXF 2BA 6.14035
204 4CNK FAD 6.29921
205 5TUK FAD 6.29921
206 2UVF AD0 6.29921
207 3OCP CMP 6.47482
208 1N62 MCN 6.56168
209 1OX5 1PR 6.56168
210 2CST MAE 6.56168
211 5FUW QBT 6.59341
212 5FUW THM 6.59341
213 1W4R TTP 6.66667
214 4F97 VDO 6.82415
215 3HRD MCN 6.875
216 3LF0 ATP 7.01754
217 3V3L V3L 7.05882
218 1I3U RR1 7.08661
219 5F2K OCA 7.33696
220 5F2K SAH 7.33696
221 1FIQ SAL 7.34908
222 1FIQ MTE 7.34908
223 5T2Y 753 7.34908
224 5KXE 6Y2 7.40741
225 1V97 MTE 7.61155
226 3FIU AMP 7.63052
227 4FOU C2E 7.69231
228 4POS NAG SIA GAL 7.91367
229 3NRZ MTE 7.92683
230 5VM6 9EG 8.0292
231 5KWY C3S 8.09717
232 1DQX BMP 8.2397
233 3RG9 WRA 8.39895
234 3RG9 NDP 8.39895
235 1ATL 0QI 8.41584
236 2DXU BT5 8.51064
237 4NDO ATP 9.05797
238 2GAG FOA 9.09091
239 2GAG FAD 9.09091
240 1OFD AKG 9.18635
241 1OFD FMN 9.18635
242 1DBT U5P 9.20502
243 2ZX2 RAM 9.23077
244 4ZM4 PLP 9.97375
245 2X1L ADN 10.4987
246 3R35 4CO 10.596
247 2W5P CL8 11.4094
248 6ASZ GLN THR ALA ARG M3L SER 11.5942
249 3LL9 ADP 11.8959
250 2P6W FLC 12.6761
251 3R5Z F42 13.1034
252 4WP9 ZDA 14.1243
253 6D6Y SAH 16.273
254 2J4K U5P 16.8142
255 2CIG 1DG 17.6101
256 4JWJ SAH 18.3168
257 3IA4 NDP 19.7531
258 4YEE 4CQ 20
259 1LOR BMP 21.9298
260 5VX9 FUC GAL NAG GAL BGC 23.6025
Pocket No.: 2; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: 296
This union binding pocket(no: 5) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
1 5XG5 A2G None
2 3VYW SAM None
3 3M6W SAM 0.787402
4 1QD1 FON 0.923077
5 3GON ANP 1.19403
6 3DKP ADP 1.22449
7 6F3M NAD 1.31234
8 4M52 FAD 1.31234
9 5LNQ CAA 1.31291
10 4IXH IMP 1.38504
11 2BGM NAJ 1.43885
12 2BEK ATP 1.55642
13 4GID 0GH 1.5748
14 5L13 6ZE 1.5748
15 1E8C UAG API 1.5748
16 2WW5 CHT 1.5748
17 4YVZ 3AT 1.59151
18 6B4K ANP 1.62791
19 5ZEC NAP 1.75439
20 4N49 SAM 1.83727
21 5NMX NAP 1.83727
22 3A4T SFG 1.83727
23 4YRY NAD 1.83727
24 4YRY FAD 1.83727
25 5XNC MTA 1.88679
26 1GUZ NAD 1.93548
27 2DT3 NAG NAG NAG NAG NAG NAG 1.93906
28 5XDT MB3 1.94805
29 1XAJ CRB 1.9774
30 1XAJ NAD 1.9774
31 1GPM AMP 2.09974
32 6B3A SAM 2.09974
33 5XET ME8 2.09974
34 1E5Q SHR 2.09974
35 5I39 FAD 2.09974
36 4GUS FAD 2.09974
37 5U8U FAD 2.09974
38 2I4I AMP 2.09974
39 4R8L ASP 2.09974
40 1P4A PCP 2.10526
41 2DPM SAM 2.11268
42 2D1K ATP 2.13333
43 2WCV FUC 2.14286
44 3WGT FAD 2.30548
45 3WGT QSC 2.30548
46 3AFN NAP 2.32558
47 2OZE AGS 2.34899
48 1F0X FAD 2.3622
49 4U7W NDP 2.3622
50 1H82 FAD 2.3622
51 1ZFJ IMP 2.3622
52 1H82 GZZ 2.3622
53 1IHU ADP 2.3622
54 1IHU AF3 2.3622
55 5FAW CHT 2.3622
56 1M7G AV2 2.36967
57 4IMG NGF 2.38908
58 4CME NAP 2.43056
59 5K6A NAP 2.43056
60 3JQF NAP 2.43056
61 1B8U NAD 2.43161
62 3GDH SAH 2.48963
63 3CTY FAD 2.50784
64 4JZ8 CIT 2.52366
65 1H65 GDP 2.59259
66 3PT9 SAH 2.62467
67 4JNE ATP 2.62467
68 5FFF NAP 2.62467
69 5YS9 FAD 2.62467
70 1PS9 NAP 2.62467
71 2YG3 FAD 2.62467
72 1V8K ANP 2.62467
73 5FFF 5XC 2.62467
74 1W5T ANP 2.62467
75 2VVL FAD 2.62467
76 5ZFJ 9BF 2.64317
77 5Z54 0HZ 2.64317
78 5ZBR ANP 2.66667
79 4MIG G3F 2.77778
80 5ZQY AR6 2.86533
81 3FWY ADP 2.86624
82 4R0M FA5 2.88714
83 2QZS GLC 2.88714
84 2QZS 250 2.88714
85 2QZS ADP 2.88714
86 6GNF GLC 2.88714
87 6GNF QPS 2.88714
88 4Z0G 5GP 2.88714
89 4AT0 FAD 2.88714
90 5Y9D FAD 2.88714
91 4WCX ALA 2.88714
92 4Z87 5GP 2.88714
93 2X06 NAD 2.90698
94 1Y1P NMN AMP PO4 2.92398
95 3RK1 ATP 2.95359
96 1N2X SAM 2.99003
97 4QIJ 1HA 2.99401
98 1LFD GNP 2.99401
99 1WQ1 GDP 3.01205
100 5FM0 WAQ 3.07692
101 4WOP CTP 3.11111
102 2Q89 6CS 3.11284
103 2NPX FAD 3.13199
104 2A9K GDP 3.13901
105 3QVP FAD 3.14961
106 2ZYJ PGU 3.14961
107 4LGY ADP 3.14961
108 2OEG UPG 3.14961
109 1ORR NAD 3.17003
110 2QTR NXX 3.1746
111 2YCH ATP 3.18302
112 4HA9 NDP 3.21285
113 2R5T ANP 3.21716
114 5AHO TLA 3.27381
115 3WQT ANP 3.30579
116 5JE8 NAD 3.31126
117 2OWZ F6P 3.31325
118 5TAR GDP 3.37838
119 6B92 SAH 3.40136
120 5HRA DAS 3.40426
121 4NW6 2NS 3.40557
122 2I3G NAP 3.40909
123 4MOP 2H5 3.41207
124 4AF0 IMP 3.41207
125 5HM3 649 3.41207
126 3LN0 52B 3.41207
127 3CGB FAD 3.41207
128 2XT3 ADP 3.48837
129 1RP0 AHZ 3.52113
130 3C3N FMN 3.52564
131 1KAO GDP 3.59281
132 6GAS FAD 3.62538
133 1J3I NDP 3.65854
134 3LRE ADP 3.66197
135 2XVF FAD 3.67454
136 4V03 ADP 3.67454
137 4B9Q ATP 3.67454
138 3C9U ADP 3.80117
139 1JG3 ADN 3.82979
140 1C0I BE2 3.85675
141 1C0I FAD 3.85675
142 3EKK GS2 3.90879
143 4ONQ SFG 3.92157
144 5EY9 5SV 3.93701
145 3B96 MYA 3.93701
146 4RPL FAD 3.93701
147 4RPL 3UC 3.93701
148 3KJS NAP 3.93701
149 1RJ9 GCP 4
150 2JCB ADP 4
151 1LCK GLU GLY GLN PTR GLN PRO GLN PRO ALA 4
152 1I4D GDP 4.01786
153 1T3Q MCN 4.16667
154 3CH6 311 4.1958
155 3CH6 NAP 4.1958
156 3ABI NAD 4.19948
157 4W93 3L9 4.19948
158 3AY6 NAI 4.19948
159 3AY6 BGC 4.19948
160 4WZ8 3W7 4.19948
161 4DSG FAD 4.19948
162 4DSG UDP 4.19948
163 1CY2 TMP 4.19948
164 5ESO ISC 4.19948
165 5ESO TDP 4.19948
166 4ZL4 4PK 4.19948
167 5TSH ANP 4.19948
168 1DR1 NAP 4.2328
169 1DR1 HBI 4.2328
170 5WKC FAD 4.2836
171 1T9D FAD 4.2836
172 4K26 SFF 4.34783
173 6G28 AR6 4.35967
174 3WBZ ATP 4.42804
175 5THZ SAH 4.44444
176 5THY SAH 4.44444
177 4C2C ALA VAL PRO ALA 4.46194
178 2NYA MGD 4.46194
179 1UPF URF 4.46429
180 3U40 ADN 4.54545
181 5GT9 NAP 4.56274
182 5CJH 522 4.71204
183 5TS5 FAD 4.72441
184 4INB 1F6 4.79452
185 3GXW SIN 4.85437
186 3K56 IS3 4.88722
187 3B1Q NOS 4.90798
188 5HGR 45D 4.92308
189 5L3R GCP 4.98339
190 5AHM IMP 4.98688
191 1MUU NAD 4.98688
192 4ZRN UPG 5.12821
193 6G1P CIT 5.14286
194 4K49 HFQ 5.14706
195 5E95 GDP 5.15464
196 1MDB AMP DBH 5.24934
197 1W2D 4IP 5.24934
198 1W2D ADP 5.24934
199 2Z3Y F2N 5.24934
200 1PA9 CSN 5.28169
201 3TDH AMP 5.30973
202 1Y0Y L2O VAL VAL ASP 5.38244
203 3A4M ADP 5.38462
204 4D0N GDP 5.40541
205 1XSE NDP 5.42373
206 4WAS NAP 5.49451
207 5O2D 9HH 5.5
208 1FP6 ADP 5.53633
209 1S8F GDP 5.64972
210 5ANU 58T 5.6962
211 4AG5 ADP 5.77428
212 1MV8 NAD 5.77428
213 1ZK4 NAP 5.9761
214 2YQS UD1 6.03675
215 6DEF GCP 6.03675
216 6D5L GNP 6.03675
217 1R18 SAH 6.1674
218 1ZC3 GNP 6.19469
219 2YGM GLA NAG GAL FUC 6.21469
220 4MZQ 1VU 6.25
221 3G5N PB2 6.29921
222 5WM2 SAL 6.29921
223 5WM2 AMP 6.29921
224 5L3S GNP 6.37584
225 2YVJ NAI 6.42202
226 6GD6 EVB 6.48148
227 5NB7 8NQ 6.52174
228 1NFQ NAI 6.53846
229 1N62 FAD 6.56168
230 1RPN NDP 6.56716
231 1WN3 HXC 6.61765
232 1X1R GDP 6.74157
233 3ZV6 4HB 6.76157
234 3ZV6 NAD 6.76157
235 3COB ADP 6.77507
236 1FFU CDP 6.82415
237 1FFU FAD 6.82415
238 1I58 ACP 6.87831
239 1VKJ A3P 7.01754
240 5J1J ANP 7.08661
241 1T57 FMN 7.28155
242 5B19 TLA 7.32759
243 4F8L AES 7.58621
244 1BZL FAD 7.61155
245 6EL3 NAP 7.61155
246 3I51 45C 7.77778
247 2GV8 FAD 7.87402
248 1VQW FAD 7.87402
249 2GVC FAD 7.87402
250 6F97 FAD 7.87402
251 1KQN NAD 7.8853
252 5UWQ GNP 8.01688
253 2WOE AR6 8.02676
254 2J3M PRI 8.13648
255 2J3M ATP 8.13648
256 1G0N PHH 8.48057
257 1G0N NDP 8.48057
258 3GJ0 GDP 8.59729
259 5BXQ GDP 8.7963
260 3GJ4 GDP 9.09091
261 1XHL TNE 9.09091
262 2X7J TPP 9.18635
263 1GEX PLP HSA 9.26966
264 1TDF FAD 9.81013
265 4X7R NTO 9.97375
266 4X7R UDP 9.97375
267 4X7R 3YW 9.97375
268 4CBU ATP 10.2362
269 3BJK CIT 10.4575
270 4RSE A6V 10.7612
271 3GJ8 GDP 10.8696
272 3AIA SAM 10.9005
273 4D42 NAP 10.9929
274 4D42 W0I 10.9929
275 2ICY UPG 11.0236
276 1A27 EST 11.0727
277 3GJ7 GDP 11.2245
278 2BME GNP 11.2903
279 2W9S NDP 11.8012
280 5TIV A3P 11.8577
281 1Z0K GTP 12.2093
282 5C2N NAG 12.5
283 4R1S NAP 13.0564
284 2V0C ANZ 13.3858
285 2A8X FAD 13.6483
286 5ZBL AMP 13.7931
287 1OXV ANP 13.881
288 3R5Y F42 14.2857
289 3R5W F42 14.2857
290 3GJ5 GDP 14.7059
291 4XT8 NAP 16.6667
292 1BC5 SAH 17.1004
293 5ODQ FAD 18.4783
294 3CH5 GDP 21.1538
295 5X80 SAL 21.25
296 3GJ3 GDP 33.3333
Pocket No.: 6; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 5c9p.bio1) has 9 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: 432
This union binding pocket(no: 9) in the query (biounit: 5c9p.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 5MT9 SRO None
2 4WUJ FMN None
3 2WQP WQP 0.859599
4 4CE5 PDG 0.900901
5 4EOX 0S5 0.985222
6 5JZJ AN2 1.0101
7 4L2H AR6 AR6 1.04987
8 3TAO PGH 1.1236
9 3IB1 IMN 1.15942
10 1J5P NAD 1.18577
11 4B7X NAP 1.19048
12 5HCY 60D 1.20846
13 5MUY MGT 1.21951
14 1IYE PGU 1.2945
15 1OYY AGS 1.31234
16 5ZBC FAD 1.31234
17 2D1S SLU 1.31234
18 2B99 RDL 1.31234
19 3F6R FMN 1.35135
20 4Y8D 49J 1.42857
21 3PP0 03Q 1.47929
22 3EMY IVA VAL VAL STA ALA STA 1.51976
23 4J36 1HR 1.5748
24 5U3B 7TD 1.5748
25 4J36 FAD 1.5748
26 4OYA 1VE 1.5748
27 5TOW NAI 1.5748
28 5TOW ADN 1.5748
29 4J75 TYM 1.5748
30 5VN0 FAD 1.5748
31 4GNI ATP 1.5748
32 2Q0L NAP 1.60772
33 3UZO GLU 1.67598
34 5LI1 ANP 1.69492
35 5BV3 M7G 1.73913
36 1KPH SAH 1.74216
37 5TO8 7FM 1.77305
38 3ITJ FAD 1.77515
39 4EDK GTP 1.82371
40 5KF9 NAG 1.82927
41 5KF9 COA 1.82927
42 2BUP ADP 1.83727
43 2BUP ATP 1.83727
44 4XTX 590 1.85185
45 2ZGY GDP 1.875
46 1GV0 NAD 1.93548
47 5BVE 4VG 1.93906
48 3A5Y KAA 2.02899
49 4MP8 MLI 2.0649
50 4MP8 NAD 2.0649
51 4L8V NAP 2.07715
52 1L1E SAH 2.09059
53 4GUT FAD 2.09974
54 3X0V FAD 2.09974
55 1JQN DCO 2.09974
56 2IID PHE 2.09974
57 1GTE FAD 2.09974
58 6C1S EFV 2.09974
59 4ONA UW1 2.09974
60 1JV1 UD1 2.09974
61 1EM6 NBG 2.09974
62 5V22 SAH 2.09974
63 2GKS ADP 2.09974
64 4GCZ FMN 2.09974
65 2HQM FAD 2.09974
66 6A0S NDP 2.10843
67 6A0S HSE 2.10843
68 2GCG NDP 2.12121
69 1QM5 PLP 2.13568
70 1QM5 GLC GLC GLC PO4 SGC GLC 2.13568
71 1NW4 IMH 2.17391
72 3ESS 18N 2.17391
73 1HGX 5GP 2.18579
74 2FK8 SAM 2.20126
75 3E7O 35F 2.22222
76 1USF NAP 2.24719
77 1USF FMN 2.24719
78 1DMH MCT 2.2508
79 5O9F 9ON 2.27273
80 5O9F NAD 2.27273
81 2EXX NAP 2.28758
82 2ART LPA AMP 2.29008
83 2QCD U5P 2.30769
84 4RW3 DKA 2.31788
85 2VT3 ATP 2.32558
86 2WSA MYA 2.3622
87 2WSA 646 2.3622
88 4D57 ARG AMP 2.3622
89 1CSI OAA 2.3622
90 1CSI CMX 2.3622
91 3ZXR P3S 2.3622
92 1WUR 8DG 2.3622
93 3ZXR IQ1 2.3622
94 1M7G ADX 2.36967
95 4X7G 3Y8 2.39044
96 1Q8Y ADP 2.41287
97 5W4W 9WG 2.41692
98 4KBA 1QM 2.41692
99 4E5N NAD 2.42424
100 3Q60 ATP 2.42588
101 5JE0 SAH 2.42915
102 5JE0 AZ8 2.42915
103 4CM8 IZ9 2.43056
104 5JCJ 6JM 2.43056
105 4CM9 YGL 2.43056
106 4IPH 1FJ 2.43902
107 4MO2 FAD 2.44565
108 4IEN COA 2.45399
109 3HY3 10F 2.46305
110 4HEE 14R 2.48227
111 2I7N ACO 2.5
112 4WB6 ATP 2.57143
113 1Q1Y BB2 2.6178
114 3R5T VBN 2.62295
115 1COY AND 2.62467
116 1PS9 FAD 2.62467
117 1G7S GDP 2.62467
118 4ER2 IVA VAL VAL STA ALA STA 2.62467
119 2VVM FAD 2.62467
120 2NAD NAD 2.62467
121 2GSD NAD 2.62467
122 2QZX IVA VAL VAL STA ALA STA 2.63158
123 1O6Z NAD 2.64026
124 3COW 52H 2.65781
125 5N6C NAD 2.66667
126 3UWV 2PG 2.68199
127 5Y8L HUI 2.71186
128 5Y8L NAD 2.71186
129 3VZS CAA 2.72374
130 2HJR APR 2.7439
131 4MV1 ADP 2.77778
132 1XTT U5P 2.77778
133 1LDN NAD 2.8481
134 6BVE PGA 2.85714
135 4PO2 ASN ARG LEU LEU LEU THR GLY 2.88714
136 6B5G CQY 2.88714
137 6B5G NAD 2.88714
138 4PXL NAD 2.88714
139 4EIP FAD 2.88714
140 4EIP K2C 2.88714
141 5WGR FAD 2.88714
142 5WSY 7UC 2.89017
143 2PI8 NAG NAG NAG NAG NAG NAG 2.89855
144 4ZVI 4S4 2.91777
145 2H6T IVA VAL VAL STA ALA STA 2.94118
146 1FM9 570 2.94118
147 1UJP CIT 2.95203
148 1G27 BB1 2.97619
149 3P2H NOO 2.98507
150 4PLG OXM 2.99401
151 4PLG NAI 2.99401
152 4M8E 29V 3.0303
153 3E3U NVC 3.04569
154 3H0A D30 3.07018
155 1H5T DAU 3.07167
156 1H5R G1P 3.07167
157 1U00 GLU LEU PRO PRO VAL LYS ILE HIS CYS 3.0837
158 3DFR NDP 3.08642
159 1PGP 6PG 3.11203
160 1EZ4 NAD 3.14465
161 2QX0 PH2 3.14465
162 6MPT C30 3.14685
163 3B2Q ATP 3.14961
164 5X68 FAD 3.14961
165 2B9W FAD 3.14961
166 4K5S FAD 3.14961
167 3WYA GDP 3.14961
168 3O0Q TTP 3.14961
169 3B6R CRN 3.14961
170 3WY9 GDP 3.14961
171 2H29 DND 3.1746
172 3FYS PLM 3.1746
173 1WKR IVA VAL VAL STA ALA STA 3.23529
174 2WSI FAD 3.26797
175 2HK9 NAP 3.27273
176 3FXU TSU 3.27869
177 5LLT DND 3.28639
178 4GAH 0ET 3.34928
179 1FEC FAD 3.41207
180 3UYK 0CX 3.41207
181 6H3O FAD 3.41207
182 3BL7 DD1 3.41207
183 2C1X UDP 3.41207
184 6C7Y ADP 3.4188
185 1EFY BZC 3.42857
186 5XKT GNP 3.5
187 4JEM C5P 3.52941
188 3FV3 IVA VAL VAL STA ALA STA 3.53982
189 1PN4 HDC 3.57143
190 2NP9 YE1 3.63636
191 3A5Z KAA 3.66492
192 4G31 0WH 3.67454
193 1YKJ FAD 3.67454
194 3NKS FAD 3.67454
195 3SSO SAH 3.67454
196 2C5A NAD 3.69393
197 2C5A GDC 3.69393
198 2CYE COA 3.7594
199 1ZAP A70 3.80117
200 1P9B GDP 3.84615
201 1DJL NAP 3.86473
202 4ZCC FAD 3.86905
203 4ZCC NAI 3.86905
204 3UWB BB2 3.8961
205 1DIG NAP 3.92157
206 3VMF GTP 3.93701
207 5JWC FAD 3.93701
208 6IIU A8X 3.93701
209 5JFL NAD 3.93701
210 5KMS FAD 3.93701
211 1KRR ACO 3.94089
212 3G1Z AMP 3.98773
213 1UNQ 4IP 4
214 5DXA SFG 4.01146
215 5EYW PGA 4.01606
216 1IZE IVA VAL VAL STA ALA STA 4.02477
217 1HXD BTN 4.04984
218 1HSR BHO 4.06977
219 2C91 NAP 4.14201
220 3TM0 B31 4.18251
221 3TM0 ANP 4.18251
222 4JP3 CIT 4.1841
223 4WJT NAG 4.19162
224 3NT6 FAD 4.19948
225 4IOK XPO 4.19948
226 4IOK ADP 4.19948
227 3NW7 LGV 4.23453
228 2GJN NIS 4.26829
229 1CDO NAD 4.27807
230 2C49 ANP 4.30464
231 5O0B 9FE 4.32099
232 4LFL TG6 4.32099
233 1LTH NAD 4.38871
234 1LYX PGA 4.43548
235 2FAV APR 4.44444
236 5XWV 8H6 4.46194
237 5XWV NDP 4.46194
238 3LXD FAD 4.46194
239 1VRP IOM 4.46194
240 4GKV NAD 4.46429
241 1U6R IOM 4.47368
242 3LA3 2FT 4.52675
243 4BUY F37 4.58333
244 2PY4 DUP 4.5977
245 1AOE GW3 4.6875
246 1AOE NDP 4.6875
247 4GLJ RHB 4.7138
248 2RAB FAD 4.72441
249 2RAB NAD 4.72441
250 1NJR XYL 4.72441
251 5I35 ANP 4.72441
252 5YJS SAL 4.72441
253 1VC9 ATP 4.7619
254 5EOU ATP 4.83871
255 1SW0 PGA 4.83871
256 2YPI PGA 4.8583
257 1TPY SAH 4.87805
258 2B3D FAD 4.90196
259 2XKO AKG 4.95496
260 1MWH GTG 4.98688
261 1MUU GDX 4.98688
262 1EBF NAD 5.02793
263 2VZZ SCA 5.04587
264 3GRU AMP 5.08475
265 6CEP NAD 5.08982
266 5SVV FMN 5.10949
267 4ZFL 4NK 5.12821
268 2YBQ SAH 5.13699
269 2IVF MD1 5.14019
270 5FBN 5WF 5.16605
271 2BFR ADP 5.20833
272 5I3B HQE 5.22648
273 2IHU TP9 5.24934
274 1NAA 6FA 5.24934
275 5L9O GOP 5.24934
276 3WXM GTP 5.24934
277 2IHT TPP 5.24934
278 4B2D SER 5.24934
279 4PJT 2YQ 5.40541
280 4UP3 FAD 5.41401
281 5O4J 9KH 5.47445
282 5O4J SAH 5.47445
283 5O4J PJL 5.47445
284 2QCS ANP 5.49828
285 4HVA 4HV 5.51181
286 5HSA FAS 5.51181
287 4I6G FAD 5.51181
288 1H74 ADP 5.51181
289 1GET FAD 5.55556
290 1GET NAP 5.55556
291 5K9B FMN 5.55556
292 1EHI ADP 5.57029
293 3WLE NAD 5.57185
294 4NBU CAA 5.6
295 1YB5 NAP 5.69801
296 3IE3 GSH 5.74163
297 3IE3 N11 5.74163
298 3KV8 FAH 5.7554
299 1QSC ACE TYR PRO ILE GLN GLU THR 5.75916
300 5BUK FAD 5.77428
301 4WZA ADP 5.7971
302 4WZA ACP 5.7971
303 3THR C2F 5.80205
304 3FHI ANP 5.84416
305 2V1O COA 5.96026
306 1ZK4 AC0 5.9761
307 4MOB COA 6.0241
308 1V3S ATP 6.03448
309 1N0U SO1 6.03675
310 1LVL FAD 6.03675
311 2DTX BMA 6.03675
312 3P9Y N7P THR SEP PRO SER TYR SET 6.06061
313 2PR5 FMN 6.06061
314 3NIM ARG ARG ALA ALA 6.09756
315 6GG9 FMN 6.17284
316 5E1M SAH 6.22407
317 5E1M PRO PRO LYS ARG ILE ALA 6.22407
318 5KVS NAP 6.29921
319 5KVS 6XR 6.29921
320 3QXV MTX 6.34921
321 4EZW ASN ARG LEU LEU LEU THR GLY 6.39269
322 3EFS BTN 6.43777
323 3D91 REM 6.45161
324 1O6B ADP 6.50888
325 3KJD 78P 6.52174
326 5K4W THR 6.54206
327 3AD8 FAD 6.56168
328 3AD8 PYC 6.56168
329 3NRR D16 6.56168
330 5M3E APR 6.66667
331 3QJ4 FAD 6.72515
332 5KVA SAM 6.83453
333 5AGR A52 6.89655
334 4BI7 PGA 7.00389
335 5KD6 6C7 7.08661
336 4FZV SAM 7.11297
337 2JB2 FAD 7.15746
338 2JB2 PHE 7.15746
339 2R09 4IP 7.20461
340 2R0D 4IP 7.20461
341 5MZY 8EZ 7.25806
342 4ZRB COA 7.29927
343 2J8C U10 7.30769
344 5DMZ ADP 7.39726
345 1GQG DCD 7.42857
346 2WLG SOP 7.44186
347 3NCQ ATP 7.56302
348 4PFC 2QX 7.61155
349 1E3W NAD 7.66284
350 1E6W NAD 7.69231
351 4EES FMN 7.82609
352 3NRZ HPA 7.92683
353 5Y6Q FAD 8.02469
354 5Y6Q MCN 8.02469
355 5MTE BB2 8.0292
356 1WPY BTN 8.08511
357 5MBX SP5 8.13648
358 5MBX FAD 8.13648
359 4NST ADP 8.13648
360 1CTU ZEB 8.16327
361 2BKK ADP 8.28402
362 1WXI AMP 8.36364
363 2QA1 FAD 8.39895
364 4NAE 1GP 8.44444
365 4HIA FMN 8.52273
366 3QV1 NAD 8.53659
367 5FLJ QUE 8.60215
368 3RNM FAD 8.62069
369 5X20 NAD 8.66142
370 1SB8 UD2 8.80682
371 1NB9 RBF 8.84354
372 1NB9 ADP 8.84354
373 5GWT SIN 8.99281
374 4CQE CQE 8.99281
375 3BZ3 YAM 9.05797
376 5K0A FAD 9.09091
377 5EFQ ADP 9.18635
378 2F5Z FAD 9.375
379 1VP5 NAP 9.39597
380 5W75 SUC 9.44882
381 5G1X ADP 9.52381
382 2V6G NAP 9.61539
383 5AE2 FYC 9.71129
384 5AE2 FAD 9.71129
385 1TDF NAP 9.81013
386 5JGA 6KC 9.84127
387 2WC1 FMN 9.89011
388 1MXI SAH 10
389 3P2E SAH 10.2222
390 5A89 FMN 10.2564
391 2AHR NAP 10.4247
392 5LXM ADP 10.5263
393 2NSJ C2R 10.6509
394 5UMY TNN 10.7143
395 3EWR APR 10.7143
396 3G6K POP 10.7143
397 3G6K FAD 10.7143
398 3T4L ZEA 10.7407
399 2RDT FMN 10.7612
400 2J9D ADP 10.9244
401 3G5K BB2 10.929
402 4K4D HFQ 10.9489
403 4J5R A1R 10.9589
404 1YY5 FAD 11.2861
405 1RSG FAD 11.2861
406 4J56 FAD 11.4035
407 3ETG GLU 11.811
408 3ETG NDP 11.811
409 1RYI FAD 11.811
410 4DR9 BB2 11.9792
411 2VBQ BSJ 12.1212
412 5NWD 9C8 12.2449
413 1RDS GPC 12.381
414 1KYZ SAH 12.8767
415 1U72 MTX 12.9032
416 1U72 NDP 12.9032
417 1DDU DDU 13.2075
418 1TDU DUR 13.2075
419 4KM2 TOP 13.4078
420 2FWP ICR 13.6612
421 2FWP CIT 13.6612
422 4USI ATP 14.2857
423 1ZEI CRS 15.0943
424 4KAX 4IP 15.528
425 4CQK PIO 17.0213
426 3M6P BB2 17.0984
427 1BC5 ACE ASN TRP GLU THR PHE 17.1004
428 2OKL BB2 17.8378
429 4Q5H ANP 18.4211
430 1FHX 4IP 19.3798
431 1WAP TRP 22.6667
432 3ZZS TRP 26.1538
Pocket No.: 10; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 5c9p.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 5c9p.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 5C9P; Ligand: FUC; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 5c9p.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
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