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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
- Family 90% : .ZIP | .CSV
- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 9 families. | |||||
1 | 5FK7 | - | GLC FRU FRU | n/a | n/a |
2 | 5FMB | - | FRU | C6 H12 O6 | C([C@@H]1[.... |
3 | 5FKC | - | FRU GLC GLA | n/a | n/a |
4 | 5FIX | - | GLC FRU | n/a | n/a |
5 | 5FK8 | - | GLC GLC FRU | n/a | n/a |
6 | 5FKB | - | GLC FRU FRU | n/a | n/a |
7 | 5FMD | - | GLC FRU FRU FRU | n/a | n/a |
8 | 5FMC | - | FRU | C6 H12 O6 | C([C@@H]1[.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 8 families. | |||||
1 | 5FK7 | - | GLC FRU FRU | n/a | n/a |
2 | 5FMB | - | FRU | C6 H12 O6 | C([C@@H]1[.... |
3 | 5FKC | - | FRU GLC GLA | n/a | n/a |
4 | 5FIX | - | GLC FRU | n/a | n/a |
5 | 5FK8 | - | GLC GLC FRU | n/a | n/a |
6 | 5FKB | - | GLC FRU FRU | n/a | n/a |
7 | 5FMD | - | GLC FRU FRU FRU | n/a | n/a |
8 | 5FMC | - | FRU | C6 H12 O6 | C([C@@H]1[.... |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | GLC GLC FRU | 1 | 1 |
2 | GLC FRU FRU | 0.597222 | 0.973684 |
3 | BGC GLC GLC | 0.554054 | 0.868421 |
4 | MAN BMA BMA BMA BMA BMA BMA | 0.536232 | 0.868421 |
5 | BGC BGC BGC BGC BGC BGC BGC BGC BGC | 0.536232 | 0.868421 |
6 | GLC GLC GLC GLC BGC GLC GLC | 0.536232 | 0.868421 |
7 | BGC GLC GLC GLC | 0.525641 | 0.868421 |
8 | GLC GLC GLC GLC GLC | 0.525641 | 0.868421 |
9 | BGC GAL GLA | 0.5 | 0.868421 |
10 | BGC BGC BGC XYS | 0.482353 | 0.871795 |
11 | BGC BGC BGC BGC BGC BGC BGC BGC | 0.474359 | 0.868421 |
12 | BGC BGC BGC XYS BGC XYS XYS | 0.465909 | 0.871795 |
13 | BMA BMA BMA BMA GLA | 0.463415 | 0.868421 |
14 | GLC GLC GLC GLC GLC GLC GLC GLC GLC | 0.463415 | 0.868421 |
15 | FRU FRU FRU | 0.459459 | 0.897436 |
16 | FRU FRU FRU FRU | 0.459459 | 0.897436 |
17 | BGC GAL NGA GAL | 0.448276 | 0.66 |
18 | GLC GAL BGC FUC | 0.444444 | 0.846154 |
19 | BGC GAL FUC | 0.444444 | 0.846154 |
20 | BGC GAL SIA | 0.442308 | 0.648148 |
21 | BGC GAL NAG GAL | 0.438202 | 0.66 |
22 | BGC BGC BGC XYS BGC XYS | 0.438202 | 0.871795 |
23 | BMA BMA BMA BMA | 0.4375 | 0.820513 |
24 | BGC BGC BGC XYS XYS GAL GAL | 0.43617 | 0.871795 |
25 | BGC GAL NGA | 0.435294 | 0.66 |
26 | G4D G4D G4D G4D G4D G4D G4D G4D G4D G4D G4D | 0.43038 | 0.846154 |
27 | BGC BGC BGC BGC BGC XYS | 0.428571 | 0.871795 |
28 | BGC BGC BGC XYS BGC XYS BGC XYS BGC | 0.428571 | 0.871795 |
29 | BGC BGC BGC BGC XYS BGC XYS BGC BGC | 0.428571 | 0.871795 |
30 | BGC Z9D | 0.426667 | 0.846154 |
31 | BGC GAL FUC GLA | 0.420455 | 0.846154 |
32 | BGC GLC AGL GLC GLC GLC | 0.419355 | 0.647059 |
33 | BGC GAL GLA NGA GAL | 0.419355 | 0.66 |
34 | FRU BGC BGC BGC | 0.414634 | 0.948718 |
35 | GLC GLC AC1 | 0.4125 | 0.666667 |
36 | BGC BGC BGC XYS BGC XYS XYS GAL | 0.41 | 0.871795 |
37 | BGC BGC BGC XYS BGC XYS XYS GAL GAL | 0.41 | 0.871795 |
38 | FRU GLC GLA | 0.404762 | 0.973684 |
39 | BGC GLA GAL | 0.402778 | 0.868421 |
40 | BGC GAL NAG | 0.4 | 0.66 |
41 | GLC FRU GLA GLA GLA | 0.4 | 0.973684 |
42 | GLC GLC XYS XYS | 0.4 | 0.846154 |
43 | GLC FRU FRU FRU | 0.4 | 0.973684 |
44 | G2F SHG BGC BGC | 0.4 | 0.785714 |
45 | GLC FRU GLA GLA | 0.4 | 0.973684 |
46 | ZEE UEA FRU FRU FRU | 0.4 | 0.973684 |
No: | Ligand | Similarity coefficient |
---|
This union binding pocket(no: 1) in the query (biounit: 5fmd.bio2) has 26 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 2ADD | GLC FRU | 12.8913 |
2 | 1Y9G | FRU | 16.6023 |