Receptor
PDB id Resolution Class Description Source Keywords
5FUI 1.4 Å EC: 7.-.-.- CRYSTAL STRUCTURE OF THE C-TERMINAL CBM6 OF LAMC A MARINE LAMINARIANSE FROM ZOBELLIA GALACTANIVORANS ZOBELLIA GALACTANIVORANS HYDROLASE CARBOHYDRATE BINDING MODULE CBM6 POLYSACCHARIDEFIXATION MARINE BACTERIAL LAMINARINASE ZOBELLIA GALACTANI
Ref.: UNRAVELING THE MULTIVALENT BINDING OF A MARINE FAMI CARBOHYDRATE-BINDING MODULE WITH ITS NATIVE LAMINAR LIGAND. FEBS J. V. 283 1863 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL A:131;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
MG A:1386;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
APY A:132;
A:133;
Valid;
Valid;
none;
none;
submit data
108.141 C6 H8 N2 c1ccn...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5FUI 1.4 Å EC: 7.-.-.- CRYSTAL STRUCTURE OF THE C-TERMINAL CBM6 OF LAMC A MARINE LAMINARIANSE FROM ZOBELLIA GALACTANIVORANS ZOBELLIA GALACTANIVORANS HYDROLASE CARBOHYDRATE BINDING MODULE CBM6 POLYSACCHARIDEFIXATION MARINE BACTERIAL LAMINARINASE ZOBELLIA GALACTANI
Ref.: UNRAVELING THE MULTIVALENT BINDING OF A MARINE FAMI CARBOHYDRATE-BINDING MODULE WITH ITS NATIVE LAMINAR LIGAND. FEBS J. V. 283 1863 2016
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 293 families.
1 5FUI - APY C6 H8 N2 c1ccnc(c1)....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 250 families.
1 5FUI - APY C6 H8 N2 c1ccnc(c1)....
50% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 173 families.
1 2V4V Ka = 1700 M^-1 XYP C5 H10 O5 C1[C@H]([C....
2 1UYX - BGC BGC n/a n/a
3 1UZ0 - BGC BGC BGC BGC n/a n/a
4 1UYZ - XYP XYP XYP XYP n/a n/a
5 1UYY - BGC BGC BGC n/a n/a
6 1UY0 - BGC BGC BGC BGC n/a n/a
7 1W9W Ka = 290000 M^-1 BGC BGC BGC GLC BGC BGC n/a n/a
8 5FUI - APY C6 H8 N2 c1ccnc(c1)....
9 1UY2 - XYP XYP n/a n/a
10 1UXX - XYP XYP XYP XYP XYP n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: APY; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 APY 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5FUI; Ligand: APY; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5fui.bio1) has 5 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 5FUI; Ligand: APY; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5fui.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
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