-->
Receptor
PDB id Resolution Class Description Source Keywords
5IDB 1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF CGL1 FROM CRASSOSTREA GIGAS, MANNOSE-BO (CGL1/MAN2) CRASSOSTREA GIGAS CGL1 LECTIN CRASSOSTREA GIGAS N-TYPE MANNOSE SUGAR BINDPROTEIN
Ref.: IDENTIFICATION, CHARACTERIZATION, AND X-RAY CRYSTAL ANALYSIS OF A NOVEL TYPE OF MANNOSE-SPECIFIC LECTIN FROM THE PACIFIC OYSTER CRASSOSTREA GIGAS. SCI REP V. 6 29135 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BMA A:1003;
B:1003;
A:1001;
B:1001;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
Ka = 2000 M^-1
180.156 C6 H12 O6 C([C@...
NHE A:1004;
Invalid;
none;
submit data
207.29 C8 H17 N O3 S C1CCC...
MAN B:1002;
A:1002;
Valid;
Valid;
none;
none;
Ka = 2000 M^-1
180.156 C6 H12 O6 C([C@...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5IDB 1 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF CGL1 FROM CRASSOSTREA GIGAS, MANNOSE-BO (CGL1/MAN2) CRASSOSTREA GIGAS CGL1 LECTIN CRASSOSTREA GIGAS N-TYPE MANNOSE SUGAR BINDPROTEIN
Ref.: IDENTIFICATION, CHARACTERIZATION, AND X-RAY CRYSTAL ANALYSIS OF A NOVEL TYPE OF MANNOSE-SPECIFIC LECTIN FROM THE PACIFIC OYSTER CRASSOSTREA GIGAS. SCI REP V. 6 29135 2016
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 5IDB Ka = 2000 M^-1 BMA C6 H12 O6 C([C@@H]1[....
2 5IDA Ka = 2000 M^-1 BMA C6 H12 O6 C([C@@H]1[....
3 5MH1 - BMA C6 H12 O6 C([C@@H]1[....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 5IDB Ka = 2000 M^-1 BMA C6 H12 O6 C([C@@H]1[....
2 5IDA Ka = 2000 M^-1 BMA C6 H12 O6 C([C@@H]1[....
3 5MH1 - BMA C6 H12 O6 C([C@@H]1[....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 5IDB Ka = 2000 M^-1 BMA C6 H12 O6 C([C@@H]1[....
2 5IDA Ka = 2000 M^-1 BMA C6 H12 O6 C([C@@H]1[....
3 5MH1 - BMA C6 H12 O6 C([C@@H]1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BMA; Similar ligands found: 142
No: Ligand ECFP6 Tc MDL keys Tc
1 WOO 1 1
2 GLC 1 1
3 BGC 1 1
4 ALL 1 1
5 BMA 1 1
6 GXL 1 1
7 GIV 1 1
8 GAL 1 1
9 MAN 1 1
10 GLA 1 1
11 Z6J 0.653846 0.866667
12 32O 0.653846 0.866667
13 RIB 0.653846 0.866667
14 FUB 0.653846 0.866667
15 AHR 0.653846 0.866667
16 MLB 0.511628 0.848485
17 GLC GLC 0.511628 0.848485
18 BGC GLC 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 BMA GLA 0.511628 0.848485
23 GLA BGC 0.511628 0.848485
24 MAN MAN 0.511628 0.848485
25 GLA GLC 0.511628 0.848485
26 BMA MAN 0.511628 0.848485
27 GAL GLC 0.511628 0.848485
28 GAL GAL 0.511628 0.848485
29 LAK 0.511628 0.848485
30 GLC BGC 0.511628 0.848485
31 YDR 0.5 0.8
32 GLC GLC GLC GLC BGC 0.488889 0.848485
33 GLC GLC GLC 0.488889 0.848485
34 MAN MAN MAN 0.488889 0.848485
35 BMA MAN MAN 0.488889 0.848485
36 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
37 EMZ 0.472222 0.794118
38 BG6 0.461538 0.675
39 BGP 0.461538 0.675
40 G6P 0.461538 0.675
41 M6P 0.461538 0.675
42 M6D 0.461538 0.675
43 A6P 0.461538 0.675
44 GAF 0.457143 0.875
45 SHG 0.457143 0.875
46 2FG 0.457143 0.875
47 G2F 0.457143 0.875
48 2H5 0.457143 0.875
49 GCS 0.457143 0.777778
50 1GN 0.457143 0.777778
51 X6X 0.457143 0.777778
52 PA1 0.457143 0.777778
53 95Z 0.457143 0.777778
54 G3F 0.457143 0.875
55 NGR 0.454545 0.848485
56 MAL 0.454545 0.848485
57 MAN GLC 0.454545 0.848485
58 GAL BGC 0.454545 0.848485
59 GLA GLA 0.454545 0.848485
60 BGC BMA 0.454545 0.848485
61 M3M 0.454545 0.848485
62 GLA GAL 0.454545 0.848485
63 MAB 0.454545 0.848485
64 GLC GAL 0.454545 0.848485
65 B2G 0.454545 0.848485
66 LBT 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 LAT 0.454545 0.848485
69 BGC GAL 0.454545 0.848485
70 CBI 0.454545 0.848485
71 CBK 0.454545 0.848485
72 N9S 0.454545 0.848485
73 LB2 0.454545 0.848485
74 3MG 0.444444 0.875
75 TCB 0.444444 0.8
76 GLC SGC 0.444444 0.8
77 YIO 0.441176 0.870968
78 2GS 0.432432 0.875
79 2M4 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 MAN BMA BMA 0.416667 0.848485
84 BMA MAN BMA 0.416667 0.848485
85 CTR 0.416667 0.848485
86 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
87 GLA GAL BGC 0.416667 0.848485
88 CE5 0.416667 0.848485
89 MLR 0.416667 0.848485
90 CE6 0.416667 0.848485
91 MT7 0.416667 0.848485
92 BMA BMA BMA 0.416667 0.848485
93 GLC BGC BGC BGC BGC 0.416667 0.848485
94 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
95 BGC BGC BGC BGC BGC 0.416667 0.848485
96 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
97 BGC GLC GLC 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 MAN BMA BMA BMA BMA 0.416667 0.848485
100 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
101 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
102 MAN BMA BMA BMA BMA BMA 0.416667 0.848485
103 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 CTT 0.416667 0.848485
107 GLA GAL GLC 0.416667 0.848485
108 MTT 0.416667 0.848485
109 GLC BGC BGC BGC 0.416667 0.848485
110 GLC GLC BGC 0.416667 0.848485
111 CEY 0.416667 0.848485
112 B4G 0.416667 0.848485
113 CE8 0.416667 0.848485
114 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
115 GAL FUC 0.416667 0.848485
116 DXI 0.416667 0.848485
117 GLC BGC GLC 0.416667 0.848485
118 CT3 0.416667 0.848485
119 GAL GAL GAL 0.416667 0.848485
120 GLC GLC GLC GLC GLC 0.416667 0.848485
121 BGC BGC BGC BGC 0.416667 0.848485
122 BGC BGC BGC 0.416667 0.848485
123 BGC BGC GLC 0.416667 0.848485
124 CEX 0.416667 0.848485
125 GLC GAL GAL 0.416667 0.848485
126 BGC GLC GLC GLC GLC 0.416667 0.848485
127 GLC BGC BGC 0.416667 0.848485
128 GS1 GLC GS1 0.408163 0.8
129 SGC SGC BGC 0.408163 0.8
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 TRE 0.405405 0.848485
135 NDG 0.404762 0.7
136 NGA 0.404762 0.7
137 NAG 0.404762 0.7
138 HSQ 0.404762 0.7
139 A2G 0.404762 0.7
140 BM3 0.404762 0.7
141 FUB AHR AHR 0.4 0.764706
142 AHR AHR AHR AHR AHR AHR 0.4 0.764706
Ligand no: 2; Ligand: MAN; Similar ligands found: 142
No: Ligand ECFP6 Tc MDL keys Tc
1 WOO 1 1
2 GLC 1 1
3 BGC 1 1
4 ALL 1 1
5 BMA 1 1
6 GXL 1 1
7 GIV 1 1
8 GAL 1 1
9 MAN 1 1
10 GLA 1 1
11 Z6J 0.653846 0.866667
12 32O 0.653846 0.866667
13 RIB 0.653846 0.866667
14 FUB 0.653846 0.866667
15 AHR 0.653846 0.866667
16 MLB 0.511628 0.848485
17 GLC GLC 0.511628 0.848485
18 BGC GLC 0.511628 0.848485
19 BGC GLA 0.511628 0.848485
20 GLA BMA 0.511628 0.848485
21 MAN BMA 0.511628 0.848485
22 BMA GLA 0.511628 0.848485
23 GLA BGC 0.511628 0.848485
24 MAN MAN 0.511628 0.848485
25 GLA GLC 0.511628 0.848485
26 BMA MAN 0.511628 0.848485
27 GAL GLC 0.511628 0.848485
28 GAL GAL 0.511628 0.848485
29 LAK 0.511628 0.848485
30 GLC BGC 0.511628 0.848485
31 YDR 0.5 0.8
32 GLC GLC GLC GLC BGC 0.488889 0.848485
33 GLC GLC GLC 0.488889 0.848485
34 MAN MAN MAN 0.488889 0.848485
35 BMA MAN MAN 0.488889 0.848485
36 GLC GLC GLC GLC GLC BGC 0.488889 0.848485
37 EMZ 0.472222 0.794118
38 BG6 0.461538 0.675
39 BGP 0.461538 0.675
40 G6P 0.461538 0.675
41 M6P 0.461538 0.675
42 M6D 0.461538 0.675
43 A6P 0.461538 0.675
44 GAF 0.457143 0.875
45 SHG 0.457143 0.875
46 2FG 0.457143 0.875
47 G2F 0.457143 0.875
48 2H5 0.457143 0.875
49 GCS 0.457143 0.777778
50 1GN 0.457143 0.777778
51 X6X 0.457143 0.777778
52 PA1 0.457143 0.777778
53 95Z 0.457143 0.777778
54 G3F 0.457143 0.875
55 NGR 0.454545 0.848485
56 MAL 0.454545 0.848485
57 MAN GLC 0.454545 0.848485
58 GAL BGC 0.454545 0.848485
59 GLA GLA 0.454545 0.848485
60 BGC BMA 0.454545 0.848485
61 M3M 0.454545 0.848485
62 GLA GAL 0.454545 0.848485
63 MAB 0.454545 0.848485
64 GLC GAL 0.454545 0.848485
65 B2G 0.454545 0.848485
66 LBT 0.454545 0.848485
67 BMA GAL 0.454545 0.848485
68 LAT 0.454545 0.848485
69 BGC GAL 0.454545 0.848485
70 CBI 0.454545 0.848485
71 CBK 0.454545 0.848485
72 N9S 0.454545 0.848485
73 LB2 0.454545 0.848485
74 3MG 0.444444 0.875
75 TCB 0.444444 0.8
76 GLC SGC 0.444444 0.8
77 YIO 0.441176 0.870968
78 2GS 0.432432 0.875
79 2M4 0.431818 0.848485
80 AHR AHR 0.428571 0.764706
81 GLF 0.428571 0.84375
82 FUB AHR 0.428571 0.764706
83 MAN BMA BMA 0.416667 0.848485
84 BMA MAN BMA 0.416667 0.848485
85 CTR 0.416667 0.848485
86 BGC BGC BGC BGC BGC BGC BGC BGC BGC 0.416667 0.848485
87 GLA GAL BGC 0.416667 0.848485
88 CE5 0.416667 0.848485
89 MLR 0.416667 0.848485
90 CE6 0.416667 0.848485
91 MT7 0.416667 0.848485
92 BMA BMA BMA 0.416667 0.848485
93 GLC BGC BGC BGC BGC 0.416667 0.848485
94 MAN MAN BMA BMA BMA BMA 0.416667 0.848485
95 BGC BGC BGC BGC BGC 0.416667 0.848485
96 BGC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
97 BGC GLC GLC 0.416667 0.848485
98 BMA BMA BMA BMA BMA 0.416667 0.848485
99 MAN BMA BMA BMA BMA 0.416667 0.848485
100 GLC GLC GLC GLC GLC GLC GLC GLC GLC 0.416667 0.848485
101 GLC BGC BGC BGC BGC BGC 0.416667 0.848485
102 MAN BMA BMA BMA BMA BMA 0.416667 0.848485
103 BGC BGC BGC BGC BGC BGC 0.416667 0.848485
104 BGC GLC GLC GLC 0.416667 0.848485
105 BGC BGC BGC GLC 0.416667 0.848485
106 CTT 0.416667 0.848485
107 GLA GAL GLC 0.416667 0.848485
108 MTT 0.416667 0.848485
109 GLC BGC BGC BGC 0.416667 0.848485
110 GLC GLC BGC 0.416667 0.848485
111 CEY 0.416667 0.848485
112 B4G 0.416667 0.848485
113 CE8 0.416667 0.848485
114 BMA BMA BMA BMA BMA BMA 0.416667 0.848485
115 GAL FUC 0.416667 0.848485
116 DXI 0.416667 0.848485
117 GLC BGC GLC 0.416667 0.848485
118 CT3 0.416667 0.848485
119 GAL GAL GAL 0.416667 0.848485
120 GLC GLC GLC GLC GLC 0.416667 0.848485
121 BGC BGC BGC BGC 0.416667 0.848485
122 BGC BGC BGC 0.416667 0.848485
123 BGC BGC GLC 0.416667 0.848485
124 CEX 0.416667 0.848485
125 GLC GAL GAL 0.416667 0.848485
126 BGC GLC GLC GLC GLC 0.416667 0.848485
127 GLC BGC BGC 0.416667 0.848485
128 GS1 GLC GS1 0.408163 0.8
129 SGC SGC BGC 0.408163 0.8
130 BGC BGC BGC GLC BGC BGC 0.408163 0.848485
131 GLC BGC BGC BGC BGC BGC BGC 0.408163 0.848485
132 1LL 0.405405 0.771429
133 TDG 0.405405 0.771429
134 TRE 0.405405 0.848485
135 NDG 0.404762 0.7
136 NGA 0.404762 0.7
137 NAG 0.404762 0.7
138 HSQ 0.404762 0.7
139 A2G 0.404762 0.7
140 BM3 0.404762 0.7
141 FUB AHR AHR 0.4 0.764706
142 AHR AHR AHR AHR AHR AHR 0.4 0.764706
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5IDB; Ligand: BMA; Similar sites found with APoc: 99
This union binding pocket(no: 1) in the query (biounit: 5idb.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 2DT5 NAD None
2 1T0I FMN None
3 2UXI G50 None
4 1V59 FAD 1.40845
5 3BXF 13P 1.40845
6 4YHQ G10 2.0202
7 6C8X BVR 2.0202
8 3MWS 017 2.0202
9 4M8X KGQ 2.0202
10 2P3B 3TL 2.0202
11 3S43 478 2.0202
12 1QPG MAP 2.8169
13 3KA2 2NC 2.8169
14 3FSM 2NC 2.8169
15 2Y6Q I7T 2.8169
16 2Y6Q FAD 2.8169
17 4Q5M ROC 2.8169
18 2OHH FMN 2.8169
19 3FHR P4O 2.8169
20 3PFD FDA 3.52113
21 1M5B BN1 3.52113
22 1S7N COA 3.52113
23 1UKW FAD 3.52113
24 5EOW FAD 3.52113
25 5ZCT ANP 3.52113
26 4NJS G08 4.0404
27 5T2Z 017 4.0404
28 6GAS FAD 4.22535
29 1UDY FAD 4.22535
30 1UDY CS8 4.22535
31 2R0N FAD 4.22535
32 4JE7 BB2 4.22535
33 2A8X FAD 4.22535
34 4OLT GCS GCS GCS GCS GCS GCS 4.22535
35 3ETH ATP 4.92958
36 1JQ3 AAT 4.92958
37 1BUC FAD 4.92958
38 3KAL ADP 4.92958
39 2I6U NVA 4.92958
40 1YQZ FAD 5.6338
41 3V4S ADP 5.6338
42 5LMC FMN 5.6338
43 6EDV COA 5.6338
44 3V4S ATP 5.6338
45 3ORQ ADP 5.6338
46 4C0C WVH 5.6338
47 5AHS FAD 5.6338
48 1PVN MZP 5.6338
49 4OJ8 2TQ 5.6338
50 4MIG G3F 5.6338
51 1SIV PSI 6.06061
52 3C6K SPD 6.33803
53 3C6K MTA 6.33803
54 5ZYN FAD 6.33803
55 6ER9 NAP 6.33803
56 6ER9 FAD 6.33803
57 1JGT APC 6.33803
58 1JGT CMA 6.33803
59 1XTP SAI 6.33803
60 1EGD FAD 6.33803
61 3K5I AIR 7.04225
62 4K5S PM0 7.04225
63 4K5S FAD 7.04225
64 3K5I ADP 7.04225
65 1P0F NAP 7.04225
66 2PT9 2MH 7.74648
67 5DMZ ADP 7.74648
68 4NBU NAI 7.74648
69 3LAD FAD 7.74648
70 1WDK NAD 7.74648
71 4J6O CIT 8.4507
72 2B9W FAD 8.4507
73 1NJJ ORX 8.4507
74 2WCV FUC 8.57143
75 4IPE ANP 9.15493
76 4IVG ANP 9.15493
77 5D63 FUC GAL GLA 9.85915
78 3FWN ATR 10.5634
79 3Q9T FAY 10.5634
80 3FWN 6PG 10.5634
81 3ETG GTP 10.5634
82 5TCI 79V 11.2676
83 3H0A D30 11.2676
84 6FRN FMN 11.2676
85 1RZ1 FAD 11.9718
86 1RZ0 FAD 11.9718
87 1H82 GZZ 13.3803
88 3B1Q NOS 13.3803
89 1H82 FAD 13.3803
90 2Q4W FAD 13.3803
91 1GXS BEZ 14.0845
92 1JQI FAD 14.0845
93 6C4A PYR 14.7887
94 1DJN ADP 15.493
95 1O94 ADP 15.493
96 6CI9 NAP 17.6056
97 4JDR FAD 18.3099
98 5CEO 50D 20.4225
99 4CQM NAP 31.6901
Pocket No.: 2; Query (leader) PDB : 5IDB; Ligand: BMA; Similar sites found with APoc: 42
This union binding pocket(no: 2) in the query (biounit: 5idb.bio1) has 8 residues
No: Leader PDB Ligand Sequence Similarity
1 3BXF FBP 1.40845
2 1UW1 ADP 2.5
3 3ICR FAD 2.8169
4 3ICS FAD 2.8169
5 4Q0P 0MK 3.52113
6 1SC6 NAD 4.22535
7 5VAD 91Y 4.22535
8 5XIO ANP 4.22535
9 4YDQ HFG 4.22535
10 4YDQ ANP 4.22535
11 4PLT NAI 4.22535
12 4PLT OXM 4.22535
13 5EIN NAP 4.22535
14 2YYJ 4HP 4.22535
15 2YYJ FAD 4.22535
16 4PVR ASP 4.22535
17 5XIJ 873 4.92958
18 5XIJ ANP 4.92958
19 5CWA 0GA 4.92958
20 2FWP ICR 5.6338
21 1WKR IVA VAL VAL STA ALA STA 6.33803
22 2YVJ NAI 6.42202
23 1T32 OHH 7.04225
24 4RW3 IPD 7.04225
25 1VCE SAH 7.04225
26 1WNG SAH 7.04225
27 4Y9D NAI 7.04225
28 1V25 ANP 8.4507
29 2WSI FAD 9.15493
30 3NT6 FAD 9.15493
31 3NTD FAD 9.15493
32 6H39 FGY 9.15493
33 1F5F DHT 10.5634
34 1YS4 NAP 10.5634
35 1FFU CDP 10.5634
36 1VA6 ADP 10.5634
37 5GUD NDP 11.2676
38 5GUD 2IT 11.2676
39 1U6R ADP 11.9718
40 2RHQ GAX 12.6761
41 5O2N NAG 19.7183
42 4QS9 BGC 23.9437
Pocket No.: 3; Query (leader) PDB : 5IDB; Ligand: BMA; Similar sites found with APoc: 37
This union binding pocket(no: 3) in the query (biounit: 5idb.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 3N8K D1X None
2 2O4N TPV 2.0202
3 3WGT QSC 2.8169
4 2NVA PL2 2.8169
5 1GSA ADP 2.8169
6 2IV3 UDP 3.52113
7 2C7G ODP 3.52113
8 2QA1 FAD 3.52113
9 4JF5 FLC 3.52113
10 4B9Q ATP 3.52113
11 4JJF N2I 4.22535
12 3CGD FAD 4.22535
13 3CGD COA 4.22535
14 6GCB GSH 4.22535
15 5T2U NAP 4.92958
16 1SW0 PGA 4.92958
17 1UYY BGC BGC 5.34351
18 5AHS COA 5.6338
19 6F7L FAD 6.33803
20 1CDO NAD 6.33803
21 4HA6 FAD 7.04225
22 2V58 LZJ 7.04225
23 2I7C AAT 7.74648
24 5VN0 FAD 7.74648
25 1GY8 NAD 9.15493
26 1GUZ NAD 9.85915
27 2RGJ FAD 9.85915
28 5J60 FAD 9.85915
29 6FYV 3NG 9.85915
30 1DRJ RIP 10.5634
31 3M8U GDS 10.5634
32 1RSG FAD 10.5634
33 2B9J ADP 13.3803
34 5MLR NAP 14.0845
35 5MLR GRQ 14.0845
36 5G3U FDA 15.493
37 3VPB ADP 16.0714
Pocket No.: 4; Query (leader) PDB : 5IDB; Ligand: MAN; Similar sites found with APoc: 99
This union binding pocket(no: 4) in the query (biounit: 5idb.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 2DT5 NAD None
2 1T0I FMN None
3 2UXI G50 None
4 1V59 FAD 1.40845
5 3BXF 13P 1.40845
6 4YHQ G10 2.0202
7 6C8X BVR 2.0202
8 3MWS 017 2.0202
9 4M8X KGQ 2.0202
10 2P3B 3TL 2.0202
11 3S43 478 2.0202
12 1QPG MAP 2.8169
13 3KA2 2NC 2.8169
14 3FSM 2NC 2.8169
15 2Y6Q I7T 2.8169
16 2Y6Q FAD 2.8169
17 4Q5M ROC 2.8169
18 2OHH FMN 2.8169
19 3FHR P4O 2.8169
20 3PFD FDA 3.52113
21 1M5B BN1 3.52113
22 1S7N COA 3.52113
23 1UKW FAD 3.52113
24 5EOW FAD 3.52113
25 5ZCT ANP 3.52113
26 4NJS G08 4.0404
27 5T2Z 017 4.0404
28 6GAS FAD 4.22535
29 1UDY FAD 4.22535
30 1UDY CS8 4.22535
31 2R0N FAD 4.22535
32 4JE7 BB2 4.22535
33 2A8X FAD 4.22535
34 4OLT GCS GCS GCS GCS GCS GCS 4.22535
35 3ETH ATP 4.92958
36 1JQ3 AAT 4.92958
37 1BUC FAD 4.92958
38 3KAL ADP 4.92958
39 2I6U NVA 4.92958
40 1YQZ FAD 5.6338
41 3V4S ADP 5.6338
42 5LMC FMN 5.6338
43 6EDV COA 5.6338
44 3V4S ATP 5.6338
45 3ORQ ADP 5.6338
46 4C0C WVH 5.6338
47 5AHS FAD 5.6338
48 1PVN MZP 5.6338
49 4OJ8 2TQ 5.6338
50 4MIG G3F 5.6338
51 1SIV PSI 6.06061
52 3C6K SPD 6.33803
53 3C6K MTA 6.33803
54 5ZYN FAD 6.33803
55 6ER9 NAP 6.33803
56 6ER9 FAD 6.33803
57 1JGT APC 6.33803
58 1JGT CMA 6.33803
59 1XTP SAI 6.33803
60 1EGD FAD 6.33803
61 3K5I AIR 7.04225
62 4K5S PM0 7.04225
63 4K5S FAD 7.04225
64 3K5I ADP 7.04225
65 1P0F NAP 7.04225
66 2PT9 2MH 7.74648
67 5DMZ ADP 7.74648
68 4NBU NAI 7.74648
69 3LAD FAD 7.74648
70 1WDK NAD 7.74648
71 4J6O CIT 8.4507
72 2B9W FAD 8.4507
73 1NJJ ORX 8.4507
74 2WCV FUC 8.57143
75 4IPE ANP 9.15493
76 4IVG ANP 9.15493
77 5D63 FUC GAL GLA 9.85915
78 3FWN ATR 10.5634
79 3Q9T FAY 10.5634
80 3FWN 6PG 10.5634
81 3ETG GTP 10.5634
82 5TCI 79V 11.2676
83 3H0A D30 11.2676
84 6FRN FMN 11.2676
85 1RZ1 FAD 11.9718
86 1RZ0 FAD 11.9718
87 1H82 GZZ 13.3803
88 3B1Q NOS 13.3803
89 1H82 FAD 13.3803
90 2Q4W FAD 13.3803
91 1GXS BEZ 14.0845
92 1JQI FAD 14.0845
93 6C4A PYR 14.7887
94 1DJN ADP 15.493
95 1O94 ADP 15.493
96 6CI9 NAP 17.6056
97 4JDR FAD 18.3099
98 5CEO 50D 20.4225
99 4CQM NAP 31.6901
Pocket No.: 5; Query (leader) PDB : 5IDB; Ligand: BMA; Similar sites found with APoc: 62
This union binding pocket(no: 5) in the query (biounit: 5idb.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 5T9E NAP None
2 2I8T GDD None
3 3FW4 CAQ 2.11268
4 1CX4 CMP 2.11268
5 2CJF RP4 2.11268
6 2V1O COA 2.11268
7 3AKK ADP 2.8169
8 6EAC ANP 3.52113
9 1YQS BSA 3.52113
10 1I82 BGC BGC 3.52113
11 1R4W GSH 3.52113
12 3WW2 SF6 3.52113
13 2QRY TPS 3.52113
14 3WW2 LPK 3.52113
15 3D9F N6C 4.22535
16 3D9F FAD 4.22535
17 3DER ALA LYS 4.22535
18 2AL2 PEP 4.22535
19 2AL2 2PG 4.22535
20 4ZL4 4PK 4.92958
21 1FQ5 0GM 4.92958
22 4GID 0GH 4.92958
23 3MPB FRU 4.92958
24 5FQK 6NT 4.92958
25 4CIB 7UZ 4.92958
26 2J8Z NAP 4.92958
27 4CW5 FMN 4.92958
28 5ZM4 AKG 5.6338
29 5ZM4 9FU 5.6338
30 3LXK MI1 5.6338
31 1QRP HH0 5.6338
32 4XF6 ADP 6.33803
33 4XF6 INS 6.33803
34 4XF6 LIP 6.33803
35 4N9I PCG 6.33803
36 2WEL K88 6.33803
37 6AMI TRP 6.33803
38 2VN9 GVD 6.33803
39 1IR2 CAP 6.42857
40 2V68 CAP 6.42857
41 2V6A CAP 6.42857
42 2V67 CAP 6.42857
43 4AFH L0B 7.04225
44 1EC9 XYH 7.04225
45 1E1O LYS 7.04225
46 2VDY HCY 7.04225
47 1BHX ASP PHE GLU GLU ILE 7.61905
48 3A23 GAL 7.74648
49 1Y9Q MED 7.74648
50 6E2O S0L 8.4507
51 1UAS GLA 8.4507
52 1WUU ANP 8.4507
53 3KJS DQ1 9.15493
54 3KJS NAP 9.15493
55 1T3Q MCN 9.85915
56 1B7Y FYA 10.5634
57 1KDK DHT 10.5634
58 2GSD NAD 12.6761
59 4A3R CIT 13.3803
60 5O2N NAG NAG NDG NAG 19.7183
61 4CCO OGA 20
62 1SMR PIV HIS PRO PHE HIS LPL TYR TYR SER 24.6479
Pocket No.: 6; Query (leader) PDB : 5IDB; Ligand: MAN; Similar sites found with APoc: 37
This union binding pocket(no: 6) in the query (biounit: 5idb.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 3N8K D1X None
2 2O4N TPV 2.0202
3 3WGT QSC 2.8169
4 2NVA PL2 2.8169
5 1GSA ADP 2.8169
6 2IV3 UDP 3.52113
7 2C7G ODP 3.52113
8 2QA1 FAD 3.52113
9 4JF5 FLC 3.52113
10 4B9Q ATP 3.52113
11 4JJF N2I 4.22535
12 3CGD FAD 4.22535
13 3CGD COA 4.22535
14 6GCB GSH 4.22535
15 5T2U NAP 4.92958
16 1SW0 PGA 4.92958
17 1UYY BGC BGC 5.34351
18 5AHS COA 5.6338
19 6F7L FAD 6.33803
20 1CDO NAD 6.33803
21 4HA6 FAD 7.04225
22 2V58 LZJ 7.04225
23 2I7C AAT 7.74648
24 5VN0 FAD 7.74648
25 1GY8 NAD 9.15493
26 1GUZ NAD 9.85915
27 2RGJ FAD 9.85915
28 5J60 FAD 9.85915
29 6FYV 3NG 9.85915
30 1DRJ RIP 10.5634
31 3M8U GDS 10.5634
32 1RSG FAD 10.5634
33 2B9J ADP 13.3803
34 5MLR NAP 14.0845
35 5MLR GRQ 14.0845
36 5G3U FDA 15.493
37 3VPB ADP 16.0714
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