Receptor
PDB id Resolution Class Description Source Keywords
5L3S 1.9 Å NON-ENZYME: SIGNAL_HORMONE STRUCTURE OF THE GTPASE HETERODIMER OF CRENARCHAEAL SRP54 AN SULFOLOBUS SOLFATARICUS (STRAIN ATCC 3DSM 1617 / JCM 11322 / P2) CO-TRANSLATIONAL PROTEIN TARGETING SIGNAL RECOGNITION PARTIGTPASE PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR CONSERVED REGULATION AND ADAPT THE SIGNAL RECOGNITION PARTICLE TARGETING COMPLEX. J.MOL.BIOL. V. 428 2880 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GOL C:304;
G:306;
B:404;
B:406;
G:304;
A:304;
A:306;
G:305;
B:405;
B:403;
H:403;
F:403;
A:305;
E:305;
D:403;
H:404;
C:305;
E:304;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
GNP E:301;
A:301;
G:301;
D:401;
H:401;
F:401;
B:401;
C:301;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
SO4 B:407;
G:307;
B:408;
A:308;
C:306;
E:306;
A:309;
A:307;
H:405;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
MG B:402;
F:402;
H:402;
E:302;
G:302;
A:302;
C:302;
D:402;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
G A:303;
E:303;
G:303;
C:303;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
363.221 C10 H14 N5 O8 P c1nc2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5L3S 1.9 Å NON-ENZYME: SIGNAL_HORMONE STRUCTURE OF THE GTPASE HETERODIMER OF CRENARCHAEAL SRP54 AN SULFOLOBUS SOLFATARICUS (STRAIN ATCC 3DSM 1617 / JCM 11322 / P2) CO-TRANSLATIONAL PROTEIN TARGETING SIGNAL RECOGNITION PARTIGTPASE PROTEIN TRANSPORT
Ref.: STRUCTURAL BASIS FOR CONSERVED REGULATION AND ADAPT THE SIGNAL RECOGNITION PARTICLE TARGETING COMPLEX. J.MOL.BIOL. V. 428 2880 2016
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 263 families.
1 5L3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 196 families.
1 5L3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 171 families.
1 5L3S - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Ligand no: 2; Ligand: G; Similar ligands found: 156
No: Ligand ECFP6 Tc MDL keys Tc
1 5GP 1 1
2 G 1 1
3 GDP 0.828947 0.986486
4 GP3 0.815789 0.960526
5 GP2 0.805195 0.948052
6 GTP 0.797468 0.986486
7 GNH 0.794872 0.973333
8 G2P 0.777778 0.948052
9 GMV 0.775 0.960526
10 GCP 0.765432 0.960526
11 G1R 0.765432 0.973333
12 GDP MG 0.7625 0.935065
13 GAV 0.759036 0.948052
14 GSP 0.756098 0.935897
15 GNP 0.756098 0.960526
16 GDP BEF 0.753086 0.911392
17 ALF 5GP 0.753086 0.9
18 GMP 0.732394 0.866667
19 GTP MG 0.72619 0.935065
20 BEF GDP 0.72619 0.9
21 GPG 0.724138 0.948052
22 GCP G 0.717647 0.947368
23 G2R 0.712644 0.948052
24 GDP AF3 0.701149 0.9
25 GDP ALF 0.701149 0.9
26 Y9Z 0.692308 0.890244
27 GDC 0.692308 0.948052
28 GKE 0.692308 0.948052
29 GDD 0.692308 0.948052
30 YGP 0.681319 0.9125
31 G G 0.677778 0.947368
32 G3A 0.677419 0.960526
33 G5P 0.670213 0.960526
34 GFB 0.666667 0.948052
35 GDR 0.666667 0.948052
36 GTG 0.666667 0.924051
37 6CK 0.659574 0.924051
38 3GP 0.65 0.959459
39 GKD 0.645833 0.948052
40 JB2 0.645833 0.948052
41 GPD 0.639175 0.9125
42 GDX 0.639175 0.960526
43 GDP 7MG 0.635417 0.923077
44 G3D 0.617977 0.972973
45 U2G 0.617647 0.924051
46 IMP 0.609756 0.972603
47 2GP 0.609756 0.946667
48 JB3 0.607843 0.935897
49 CG2 0.605769 0.924051
50 G4P 0.604396 0.972973
51 DGP 0.60241 0.922078
52 DG 0.60241 0.922078
53 FEG 0.601942 0.890244
54 NGD 0.601942 0.948052
55 ZGP 0.596154 0.879518
56 0O2 0.595745 0.972973
57 2MD 0.584906 0.879518
58 G7M 0.583333 0.960526
59 CAG 0.583333 0.869048
60 G A A A 0.579439 0.935065
61 U A G G 0.574074 0.947368
62 MGD 0.568807 0.879518
63 DBG 0.566372 0.935897
64 PGD 0.5625 0.9125
65 MD1 0.5625 0.879518
66 P2G 0.55814 0.894737
67 FE9 0.553571 0.784946
68 I2C FE2 CMO CMO 0.54955 0.818182
69 P1G 0.545455 0.883117
70 GH3 0.542553 0.96
71 TPG 0.53913 0.829545
72 GPX 0.53125 0.933333
73 DGI 0.527473 0.910256
74 G1R G1R 0.525862 0.911392
75 PGD O 0.521368 0.83908
76 DGT 0.521277 0.910256
77 G4M 0.520325 0.869048
78 G G U 0.519231 0.947368
79 G C 0.513514 0.911392
80 93A 0.511364 0.821429
81 IDP 0.505495 0.959459
82 MGQ 0.505155 0.948052
83 C2R 0.5 0.893333
84 BGO 0.5 0.911392
85 AMP 0.5 0.905405
86 AMZ 0.5 0.905405
87 A 0.5 0.905405
88 AIR 0.493671 0.890411
89 MGV 0.49 0.901235
90 SGP 0.488889 0.8375
91 U G A 0.488189 0.9
92 NIA 0.488095 0.8375
93 GPC 0.474138 0.890244
94 G G G RPC 0.473684 0.886076
95 GGM 0.473684 0.888889
96 71V 0.47191 0.85
97 APC G U 0.470085 0.897436
98 MGP 0.46875 0.948052
99 C2E 0.468085 0.933333
100 35G 0.468085 0.945946
101 PCG 0.468085 0.945946
102 G1G 0.466102 0.9125
103 7RA 0.465909 0.918919
104 AAM 0.465909 0.905405
105 RMB 0.465909 0.813333
106 FAI 0.465909 0.905405
107 1RB 0.465116 0.824324
108 6G0 0.463918 0.948052
109 5GP 5GP 0.463158 0.894737
110 G G G C 0.462185 0.924051
111 RBZ 0.45977 0.815789
112 UCG 0.459016 0.923077
113 A G C C 0.458333 0.923077
114 DG DG 0.456311 0.876543
115 G U34 0.45614 0.9
116 IMO 0.449438 0.866667
117 A G U 0.446154 0.9
118 G C C C 0.443548 0.935897
119 IRN 0.443038 0.808219
120 PMO 0.43956 0.792208
121 7RP 0.438202 0.864865
122 GTA 0.436364 0.924051
123 P2P 0.433333 0.842105
124 JLN 0.433333 0.88
125 XMP 0.428571 0.907895
126 PGS 0.425532 0.804878
127 RVP 0.423529 0.84
128 G2Q 0.423077 0.948052
129 ADP 0.419355 0.906667
130 A2D 0.417582 0.881579
131 ABM 0.417582 0.857143
132 GUO 0.415842 0.932432
133 CA0 0.410526 0.883117
134 2SA 0.41 0.871795
135 1YD 0.409091 0.933333
136 4BW 0.409091 0.933333
137 AP2 0.408602 0.871795
138 A12 0.408602 0.871795
139 BA3 0.408602 0.881579
140 6C6 0.408163 0.825
141 25A 0.407767 0.906667
142 NOS 0.406977 0.813333
143 AMP MG 0.406593 0.833333
144 ATP 0.40625 0.906667
145 AP5 0.404255 0.881579
146 B4P 0.404255 0.881579
147 6IA 0.40404 0.785714
148 ACQ 0.40404 0.883117
149 ANP 0.40404 0.883117
150 CGP 0.403361 0.878049
151 3ZE 0.402062 0.871795
152 APC 0.402062 0.871795
153 5FA 0.402062 0.906667
154 AQP 0.402062 0.906667
155 N6P 0.4 0.853333
156 AN2 0.4 0.894737
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5l3s.bio4) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: 469
This union binding pocket(no: 2) in the query (biounit: 5l3s.bio4) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4TMZ GSP 0.00001064 0.50286 2.01342
2 4AG5 ADP 0.000005378 0.60332 2.7027
3 5K5Z ANP 0.0001433 0.46336 2.7027
4 5TSH ANP 0.000009656 0.4434 2.7027
5 5EP2 AZU 0.001532 0.40952 2.73438
6 5MZN ADP 0.0002287 0.51278 3.02013
7 3COB ADP 0.00001627 0.40187 3.02013
8 2Q2Y ADP 0.006385 0.41438 3.04054
9 2Q2Y MKR 0.006154 0.41402 3.04054
10 4WEI GLC GAL 0.01144 0.42454 3.2491
11 2WKQ GTP 0.00004259 0.48936 3.3557
12 3QDK QDK 0.02785 0.40185 3.69128
13 4IDN GNP 0.0002681 0.46051 3.71622
14 1I9Z 2IP 0.01045 0.41904 3.71622
15 3QKT ANP 0.003463 0.40725 3.71622
16 4PX9 ADP 0.000003932 0.5949 3.76712
17 4WZ6 ATP 0.00003536 0.56027 3.7931
18 4PFO ADP 0.0008516 0.43375 3.80711
19 3DEF GDP 0.000001562 0.49536 3.81679
20 5JCP GDP ALF 0.00002051 0.5243 3.81862
21 1SKQ GDP 0.000000878 0.47121 4.02685
22 1YTM ATP 0.0003897 0.45788 4.02685
23 1GOJ ADP 0.000004036 0.61834 4.05405
24 3EC1 GDP 0.000003085 0.58324 4.05405
25 5KSZ GCP 0.00006319 0.51399 4.05405
26 2ZFI ADP 0.0001113 0.51488 4.09836
27 5UQW GDP 0.00003205 0.48973 4.2328
28 1KSH GDP 0.00000284 0.51259 4.30108
29 5TAR GDP 0.000002991 0.56878 4.32432
30 5TB5 GDP 0.00000158 0.4886 4.32432
31 3U6B GDP 0.0000004593 0.64192 4.36242
32 1YVD GNP 0.00000671 0.51952 4.36242
33 2BVN GNP 0.0000006196 0.51048 4.36242
34 5JBQ GDP 0.000000476 0.48611 4.36242
35 1D8T GDP 0.0000008076 0.48086 4.36242
36 4G5G GDP 0.0000007616 0.48075 4.36242
37 4XGU ADP 0.0002398 0.47639 4.36242
38 3U6K GDP 0.000001792 0.47225 4.36242
39 2VF7 ADP 0.0007129 0.46976 4.36242
40 2AWN ADP 0.0000005365 0.40361 4.39189
41 4RZ3 ADP 0.00004939 0.45407 4.40678
42 2GCO GNP 0.00001665 0.4674 4.47761
43 2GCN GDP 0.0001548 0.45147 4.47761
44 2FAH GDP 0.000914 0.45482 4.69799
45 3KJI ADP 0.002123 0.43391 4.72441
46 5GJC ATP 0.00006392 0.52672 4.72973
47 3TBK ANP 0.0001661 0.51996 4.72973
48 1AZT GSP 0.00001434 0.47417 4.72973
49 2X77 GDP 0.000002098 0.59128 4.7619
50 1UKG MMA 0.024 0.40711 4.7619
51 1KMQ GNP 0.00007243 0.46982 4.8913
52 1RYH GNP 0.000007755 0.46579 4.92611
53 5IRC GDP 0.000192 0.41979 4.97512
54 5HCN GCP 0.0000002769 0.6335 4.98084
55 4XOI GTP 0.0000744 0.4749 5
56 4YS0 ADP 0.0002806 0.47333 5.03356
57 3IO3 ADP 0.01486 0.40132 5.03356
58 1OS1 ATP 0.001813 0.42511 5.06757
59 1OS1 PYR 0.002048 0.42438 5.06757
60 2GWH A3P 0.008194 0.40751 5.06757
61 3DC4 ADP 0.00004853 0.40567 5.06757
62 1H65 GDP 0.00001038 0.52005 5.18518
63 2J0V GDP 0.00001367 0.55221 5.18868
64 1CS4 GSP 0.00002036 0.47543 5.18868
65 4KFU ACP 0.00006271 0.40222 5.18868
66 1R0X ATP 0.00006992 0.40127 5.24476
67 3SBD GNP 0.0001235 0.45882 5.34759
68 1V8K ANP 0.00009676 0.51787 5.36913
69 4D0N GDP 0.000004202 0.45688 5.36913
70 1OW3 GDP 0.00006498 0.44728 5.3719
71 4R43 GDP 0.0002424 0.49826 5.40541
72 4A4Z ANP 0.0002798 0.49519 5.40541
73 2I4I AMP 0.0007944 0.45305 5.40541
74 3RLF ANP 0.001626 0.41569 5.40541
75 1FP6 ADP 0.000008423 0.46974 5.53633
76 5J1J ANP 0.000002419 0.54085 5.61404
77 2WIC GNP 0.0000009322 0.49196 5.61798
78 1TAD GDP 0.00001134 0.47738 5.7047
79 1TAD ALF 0.00001134 0.47738 5.7047
80 3DOE GTP 0.000003681 0.53331 5.72917
81 3H86 AP5 0.001104 0.44115 5.72917
82 5IRR GSP 0.000006121 0.52971 5.74324
83 4NCN GTP 0.00001307 0.51057 5.74324
84 1R6B ADP 0.0001184 0.5072 5.74324
85 4J0Q GDP 0.0000004402 0.47735 5.74324
86 1JJ7 ADP 0.000006797 0.60416 5.76923
87 2F5X ASP 0.0361 0.4008 5.76923
88 2HK9 ATR 0.01009 0.41852 5.81818
89 4DSU GDP 0.00002608 0.47773 5.82011
90 5X40 ACP 0.003325 0.40339 5.82192
91 3W5J GDP 0.000001552 0.63332 5.88235
92 5O2T GSP 0.00001067 0.49196 5.88235
93 4R98 GNH 0.00003963 0.43788 5.90406
94 4YMU ATP 0.00005606 0.53671 5.90909
95 4D81 ADP 0.00009894 0.4991 6.00707
96 3FWY ADP 0.000003061 0.49619 6.04027
97 1W1A NDG 0.01636 0.41709 6.04027
98 1SVM ATP 0.009564 0.41328 6.04027
99 1SVK ALF GDP 0.000023 0.46086 6.08108
100 4HSE ADP 0.00002547 0.44061 6.08108
101 1YZG GDP 0.0000002572 0.63503 6.14525
102 1SVI GDP 0.00000148 0.6163 6.15385
103 1S8F GDP 0.00001451 0.48011 6.21469
104 2BEK ATP 0.0007187 0.45291 6.22568
105 2A9K GDP 0.000006305 0.54728 6.27803
106 5KSP GDP 0.00002373 0.54071 6.31579
107 4LHW GNP 0.0000164 0.49326 6.32184
108 1G7S GDP 0.000005241 0.57219 6.37584
109 1IWE IMP 0.00008425 0.53767 6.37584
110 3WYA GDP 0.000001088 0.47902 6.37584
111 3FVQ ATP 0.0009223 0.41471 6.37584
112 2OBM ADP 0.00002639 0.56884 6.41892
113 5IRN ADP 0.00004115 0.44782 6.41892
114 5M7P ADP 0.000638 0.41615 6.41892
115 1NST A3P 0.008636 0.40648 6.41892
116 4DKX GDP 0.0000004703 0.63163 6.48148
117 2F9L GDP 0.00001904 0.50382 6.53266
118 1TX4 ALF GDP 0.00008495 0.47697 6.56566
119 3B5J 12D 0.0001254 0.52629 6.58436
120 3Q72 GNP 0.0000001583 0.49014 6.62651
121 4R2I ANP 0.003713 0.45008 6.66667
122 5LB3 ADP 0.00005178 0.53845 6.71141
123 3EWA ANP 0.0001083 0.51546 6.71141
124 5N69 ADP 0.0003392 0.47456 6.71141
125 2JLR ANP 0.0004824 0.46755 6.71141
126 5FG3 GDP 0.000001388 0.46635 6.71141
127 2QEN ADP 0.00006582 0.44836 6.71141
128 2B8W ALF 5GP 0.0003735 0.44649 6.71141
129 1MKY GDP 0.0000002777 0.64288 6.75676
130 4KBF AMP 0.00013 0.51828 6.75676
131 2PL3 ADP 0.00001697 0.56288 6.77966
132 3GJ3 GDP 0.00000132 0.60959 6.78733
133 3GJ0 GDP 0.000001346 0.60917 6.78733
134 3GJ4 GDP 0.0000009954 0.47978 6.78733
135 3NKV GNP 0.00001176 0.49889 6.85714
136 1ZD9 GDP 0.000004511 0.49614 6.91489
137 3Q9L ATP 0.00002752 0.51857 6.92308
138 5BXQ GDP 0.000001061 0.48595 6.94444
139 3RWO GDP 0.00003129 0.49226 7.02703
140 3TNF GNP 0.000006825 0.49134 7.04698
141 3SFV GDP 0.00001672 0.48208 7.04698
142 1IN4 ADP 0.00009777 0.44686 7.04698
143 1P9B GDP 0.001932 0.4379 7.04698
144 1Y63 ADP 0.000008816 0.4458 7.06522
145 1JWY GDP 0.000000529 0.51271 7.09459
146 1IBR GNP 0.00001827 0.50386 7.09459
147 1JWY ADP 0.0002669 0.40377 7.09459
148 4LC1 GDP 0.0000003055 0.64085 7.12166
149 4E03 ADP 0.000005522 0.46484 7.28155
150 3BY9 SIN 0.02953 0.40589 7.30769
151 1WF3 GNP 0.000004125 0.50734 7.38255
152 4OHY ANP 0.0001212 0.46631 7.38255
153 5HR5 ADP 0.0002074 0.42748 7.38255
154 3B7G ANP 0.00003764 0.43542 7.3913
155 3PCR GTP 0.000006048 0.5244 7.40741
156 2C78 GNP 0.000002272 0.52188 7.43243
157 2C77 GNP 0.000002738 0.5116 7.43243
158 2ODE ALF GDP 0.00002035 0.50585 7.43243
159 1OYY AGS 0.0003402 0.49102 7.43243
160 4C4P GNP 0.00001806 0.48372 7.51445
161 5XCO GDP 0.000002705 0.48911 7.60234
162 2ZEJ GDP 0.000008279 0.49554 7.6087
163 4V0K GDP 0.00001668 0.50123 7.69231
164 4LYA ATP 0.00006898 0.51846 7.71812
165 2VVG ADP 0.000006766 0.60375 7.77027
166 2NGR GDP 0.00002097 0.54329 7.77027
167 1A4R GNH 0.00005382 0.5055 7.77027
168 4PJ3 ANP 0.000122 0.49493 7.77027
169 1A4R GDP 0.00008828 0.49062 7.77027
170 4ITR GDP 0.0001009 0.48807 7.77027
171 1X6V ADP 0.0007749 0.4404 7.77027
172 1GRN GDP 0.0001059 0.44006 7.77027
173 4R8L ASP 0.02261 0.40507 7.77027
174 4PC3 GDP 0.000002283 0.57416 7.80142
175 5SZH GNP 0.00001488 0.50751 7.84314
176 3TKL GTP 0.000006345 0.51825 7.86517
177 3E5H GNP 0.00008822 0.46492 7.86517
178 3N5C GDP 0.0000003406 0.63853 8.02469
179 4ZNL BEF ADP 0.00007113 0.51782 8.05369
180 2XTZ GSP 0.00003718 0.47937 8.05369
181 2FNA ADP 0.0001506 0.47107 8.05369
182 2IS6 ADP 0.00003834 0.42639 8.05369
183 4KAX GTP 0.000001997 0.55022 8.07453
184 1LVG ADP 0.000007171 0.59061 8.08081
185 2RCN GDP 0.0000001932 0.65063 8.10811
186 4YC7 GNP 0.00008358 0.46193 8.10811
187 4DID GDP 0.00001957 0.44427 8.10811
188 5I0H ADP BEF 0.0005744 0.42361 8.10811
189 5GVR LMR 0.000182 0.5279 8.11966
190 5VGR GDP 0.0003763 0.46761 8.12065
191 3GJ7 GDP 0.000001085 0.61377 8.16327
192 5EE5 GTP 0.000001316 0.53014 8.18713
193 5HPY GDP 0.00004888 0.45163 8.18966
194 1VG0 GDP 0.000001725 0.57974 8.21256
195 1VG8 GNP 0.000006086 0.52343 8.21256
196 1YZQ GNP 0.00001082 0.49215 8.23529
197 1Z08 GNP 0.00003658 0.48194 8.23529
198 3KTA AP5 0.0002654 0.42275 8.24176
199 3P4X ADP 0.000004523 0.45456 8.38926
200 3FKQ ATP 0.006267 0.41575 8.38926
201 5GOE GDP 0.000002159 0.58277 8.44595
202 1NY5 ADP 0.00007689 0.49855 8.44595
203 5BQ5 ADP BEF 0.00008039 0.50908 8.46561
204 3CPJ GDP 0.000002535 0.49056 8.52018
205 2G77 GDP 0.000004963 0.48687 8.58586
206 4XSH GSP 0.00003575 0.50786 8.6758
207 3GJ8 GDP 0.000001444 0.59906 8.69565
208 1DAR GDP 0.000001903 0.60178 8.72483
209 1WA5 GTP 0.00002056 0.45476 8.72483
210 3REF GDP 0.0001034 0.47795 8.76289
211 1TU3 GNP 0.000008723 0.51488 8.77193
212 1YQT ADP 0.00001801 0.5758 8.78378
213 1XKV ATP 0.0002002 0.4905 8.78378
214 2ZJ5 ADP 0.002568 0.46073 8.78378
215 3CV2 OXL 0.03001 0.41353 8.78378
216 1R2Q GNP 0.00001908 0.51574 8.82353
217 1Z06 GNP 0.00001116 0.5083 8.99471
218 1TQ4 GDP 0.000003668 0.54505 9.0604
219 2FSH ANP 0.0000588 0.53566 9.0604
220 5XDR ADP 0.0005597 0.47481 9.0604
221 1Z6T ADP 0.00003405 0.45645 9.0604
222 3T1O GDP 0.000008228 0.55551 9.09091
223 3T12 GDP ALF 0.00001449 0.49205 9.09091
224 2XT3 ADP 0.00001298 0.58781 9.12162
225 1KO8 6PG 0.00005277 0.50043 9.14286
226 1JI0 ATP 0.00005365 0.54537 9.16667
227 1VHT BA3 0.000212 0.41826 9.17431
228 1VG9 GDP 0.000001029 0.60612 9.18919
229 1VG1 GDP 0.000000434 0.4982 9.18919
230 1F9V ADP 0.00004296 0.55608 9.2219
231 4NON GDP 0.00009561 0.47625 9.23077
232 1L2T ATP 0.004648 0.40205 9.3617
233 2EFE GNH 0.000004132 0.48523 9.3633
234 3RC3 ANP 0.005917 0.43461 9.39597
235 4CVN ADP 0.000007016 0.5911 9.42408
236 1OIX GDP 0.00002038 0.49985 9.42408
237 1OIV GDP 0.00004025 0.4878 9.42408
238 1FQK GDP 0.00003008 0.4956 9.52381
239 1FQK ALF 0.008602 0.43467 9.52381
240 1Z83 AP5 0.004386 0.41454 9.69388
241 5G41 AP5 0.001191 0.45124 9.86547
242 2CJW GDP 0.0000001021 0.66425 9.89583
243 3LXR GDP 0.0000208 0.53662 9.89583
244 1D2N ANP 0.0005109 0.45282 9.92647
245 1UPT GTP 0.000001911 0.55102 10
246 3UIE ANP 0.00004042 0.44465 10
247 4P32 ADP 0.002571 0.4191 10.0402
248 5KUT GDP 0.000002985 0.47205 10.0529
249 1IHU AF3 0.00001648 0.51158 10.0671
250 1IHU ADP 0.00002123 0.50186 10.0671
251 1F6B GDP 0.00000184 0.48301 10.101
252 3EZ2 ADP 0.00008248 0.52825 10.1351
253 5FTB ANP 0.0000583 0.51563 10.1351
254 4LX0 BEF GDP 0.00001659 0.50558 10.1351
255 5M04 GDP 0.0000003189 0.4823 10.1351
256 5FHD ADP ALF 0.0002409 0.46686 10.1351
257 1OXV ANP 0.0000795 0.40476 10.1351
258 1Z0J GTP 0.000005618 0.52485 10.1695
259 1JJV ATP 0.000004302 0.60798 10.1942
260 3PQC GDP 0.00003284 0.44637 10.2564
261 1YZN GNP 0.000008252 0.49642 10.2703
262 4OI4 ATP 0.0001488 0.4571 10.4348
263 1KY3 GDP 0.0000012 0.50223 10.4396
264 2EW1 GNP 0.00000439 0.51811 10.4478
265 3WXM GTP 0.00001216 0.509 10.473
266 3VMF GTP 0.00001003 0.5015 10.473
267 3ZFD ANP 0.0001491 0.4965 10.473
268 2ZPA ADP 0.000144 0.48128 10.473
269 2CUN 3PG 0.003663 0.44883 10.473
270 2PZE ATP 0.00001021 0.59342 10.4803
271 3VX3 ADP 0.0002741 0.43203 10.4839
272 4NU0 AP5 0.0008114 0.45066 10.5991
273 4MKF AP5 0.001392 0.44406 10.5991
274 4WOP CTP 0.00006842 0.49038 10.6667
275 4TTQ ATP 0.00004056 0.42842 10.6977
276 3BFV ADP 0.000001901 0.6018 10.7011
277 5I34 GDP 0.00000006597 0.51942 10.7383
278 2FJU GSP 0.00003783 0.50146 10.7383
279 4LPS GDP 0.000003882 0.46635 10.7438
280 5H56 ADP 0.0006873 0.44412 10.7692
281 5H56 TYD 0.0006873 0.44412 10.7692
282 4XTR ADP 0.00004447 0.5037 10.8108
283 4XTR ATP 0.00003067 0.49526 10.8108
284 4XVU ATP 0.00003563 0.49256 10.8108
285 3ZQ6 ADP ALF 0.00002052 0.482 10.8108
286 2WOJ ADP ALF 0.00005289 0.46633 10.8108
287 1O3Y GTP 0.000004785 0.51701 10.8434
288 2J59 GTP 0.000005668 0.51406 10.8434
289 2W58 ADP 0.0000002843 0.42378 10.8911
290 1M7G AV2 0.00001248 0.43419 10.9005
291 1M7G ADX 0.00154 0.43098 10.9005
292 1M7G ADP 0.004326 0.40945 10.9005
293 2HT6 GDP 0.00000007429 0.68182 10.9195
294 1S9D GDP 0.0000008294 0.61063 10.9756
295 1RE0 GDP 0.0000002476 0.49002 10.9756
296 4YLG GDP 0.0000006863 0.52022 10.9827
297 4P3Y GDP 0.0000003526 0.48058 10.989
298 1XX6 ADP 0.0006467 0.49469 10.9948
299 2OFW ADX 0.0005059 0.46069 11.0577
300 3LRE ADP 0.000007333 0.60278 11.0738
301 4QM7 GTP 0.00006946 0.52495 11.1111
302 2OM2 GDP 0.00002887 0.50651 11.1111
303 5MVR ADP 0.000101 0.41318 11.1111
304 2BCG GDP 0.000007991 0.53644 11.165
305 2WJG GDP 0.000002041 0.60028 11.1702
306 1GP2 GDP 0.00006187 0.48266 11.2676
307 1Z2A GDP 0.0000186 0.50423 11.3095
308 4QOS ADP 0.0001257 0.49998 11.3208
309 5LTJ ADP 0.0003228 0.4038 11.4094
310 3AQ4 GDP 0.0000003254 0.50442 11.413
311 3H4S ADP 0.00001399 0.58639 11.4865
312 1P72 ADP 0.001001 0.44023 11.4865
313 3BFX A3P 0.007555 0.40568 11.4865
314 3T5G GDP 0.000004425 0.56815 11.6022
315 2GJ8 ALF GDP 0.000008022 0.49691 11.6279
316 1G7C 5GP 0.00005677 0.52926 11.7021
317 2DPY ADP 0.00005475 0.54491 11.8243
318 5JCZ GDP 0.000005304 0.54425 11.8243
319 4BQS ADP 0.00002409 0.54757 11.9318
320 2CHG ANP 0.0002707 0.42538 11.9469
321 5H67 ATP 0.002457 0.44395 12.234
322 4PPF FLC 0.000007626 0.59457 12.2857
323 1Z0F GDP 0.0000005103 0.62075 12.2905
324 2Y8E GNP 0.00001034 0.50101 12.2905
325 1KK1 GNP 0.0000002528 0.48338 12.4161
326 1D2E GDP 0.000007772 0.54976 12.5
327 2BME GNP 0.00001346 0.50719 12.5
328 2A5F GTP 0.000005789 0.51987 12.5714
329 4HDQ GNP 0.00001238 0.51079 12.5749
330 4HDO GNP 0.00001323 0.48862 12.5749
331 3X1Z GNP 0.00001353 0.48061 12.5749
332 2WJH GDP 0.000001786 0.4858 12.6506
333 2WJH FLC 0.00001526 0.46275 12.6506
334 2VB6 ADP BEF 0.001093 0.42284 12.7517
335 5J6Y BGC 0.02901 0.40025 12.766
336 5J6Y GLC 0.02901 0.40025 12.766
337 3GJX GTP 0.00002513 0.49819 12.8378
338 3CX8 GSP 0.00003591 0.49564 12.8378
339 3AB3 GDP 0.00004161 0.46761 12.8378
340 1ZCB GDP 0.0001457 0.46502 12.8378
341 3ZIA ADP 0.00003104 0.45275 12.8378
342 3ZIA ATP 0.00002281 0.44382 12.8378
343 2FFQ GSP 0.000005479 0.50289 12.8655
344 1ZIN AP5 0.0006337 0.45768 12.9032
345 4U5X GNP 0.00001325 0.48005 12.9213
346 5DI3 GNP 0.000003317 0.54093 12.9278
347 3Q85 GNP 0.0000001539 0.5022 13.0178
348 4BAS GNP 0.000002146 0.52435 13.0653
349 5E5U MLI 0.008065 0.43353 13.0653
350 4DCT GDP 0.00000132 0.60094 13.0872
351 1UAD GNP 0.00001714 0.50291 13.1313
352 2QN6 GDP 0.0000007338 0.63166 13.1757
353 1W0J ADP 0.00000816 0.54879 13.1757
354 4RD0 GDP 0.000005983 0.50594 13.1757
355 1W0J ADP BEF 0.0004327 0.4603 13.1757
356 2CK3 ADP 0.0003898 0.44059 13.1757
357 2CK3 ANP 0.000343 0.42576 13.1757
358 1NVU GTP 0.00002435 0.49875 13.253
359 1SQ5 ADP 0.00006284 0.5204 13.5135
360 2W2X GSP 0.00001637 0.51711 13.5135
361 3A1S GDP 0.000008194 0.46516 13.5135
362 2V7Q ATP 0.000007671 0.46616 13.6364
363 2V7Q ADP 0.00005285 0.41789 13.6364
364 1M2O GNP 0.000004579 0.51472 13.6842
365 4KVG GTP 0.000008357 0.50452 13.6905
366 2QZ4 ADP 0.00002183 0.53564 13.7405
367 4ZKD GDP 0.00002613 0.49749 13.8514
368 3DKP ADP 0.00002605 0.43608 13.8776
369 1NRJ GTP 0.000003555 0.54563 13.9241
370 1HTW ADP 0.0002283 0.41041 13.9241
371 5WDR GNP 0.00002001 0.50224 14.0351
372 4ZG4 VO4 ADP 0.0007354 0.42961 14.094
373 1FQJ GDP 0.00002322 0.48972 14.2857
374 5IFS ADP 0.00003249 0.44509 14.346
375 4HAT GNP 0.00002092 0.50344 14.4295
376 3WYF GTP 0.00002815 0.4696 14.4295
377 3WYG GTP 0.00003466 0.46603 14.4295
378 2ZR9 DTP 0.0002023 0.40391 14.4295
379 3CNL GNP 0.000000146 0.48849 14.5038
380 1WDT GTP 0.000002856 0.55606 14.527
381 3A4M ADP 0.000001297 0.4547 14.6154
382 4V03 ADP 0.00002724 0.44631 14.786
383 4FCW ADP 0.0006272 0.40047 14.8649
384 3BOS CDP 0.0002785 0.49529 14.876
385 4M9Q GNP 0.000002793 0.54408 14.978
386 2D7D ADP 0.0001592 0.41158 15
387 4YDS ATP 0.00007148 0.53892 15.3509
388 5UWP GNP 0.00001932 0.50486 15.3846
389 5UWR GNP 0.00001762 0.5045 15.3846
390 5UWT GNP 0.00001854 0.5036 15.3846
391 5UWI GNP 0.000019 0.50316 15.3846
392 5UWH GNP 0.00001561 0.48613 15.3846
393 5DIF GNP 0.00001621 0.48547 15.3846
394 5UWO GNP 0.00001643 0.48535 15.3846
395 5DHF GNP 0.00001693 0.48487 15.3846
396 5UWQ GNP 0.00001765 0.48395 15.3846
397 5UWJ GNP 0.00001971 0.48247 15.3846
398 5DI9 GNP 0.00002053 0.47447 15.3846
399 5UWS GNP 0.00002088 0.47419 15.3846
400 2A5J GDP 0.000001327 0.59268 15.4362
401 2QTV GNP 0.000004708 0.52351 15.5689
402 1B7T ADP 0.0008576 0.46086 16.0256
403 1ZJ6 G3D 0.0000002644 0.63446 16.0428
404 1QHH ATP 0.003665 0.4356 16.1677
405 1KK8 BEF ADP 0.0009414 0.44974 16.2338
406 4JLV ADP 0.00003978 0.54422 16.3569
407 3RAB GNP 0.00001906 0.50104 17.1598
408 1NF3 GNP 0.000116 0.45951 17.1875
409 4D0G GTP 0.000006232 0.50566 17.3913
410 3MJH GTP 0.00001533 0.49445 17.6471
411 1EK0 GNP 0.00001243 0.4979 18.2353
412 3TK1 GDP 0.00000008601 0.49122 18.2432
413 1D5C GDP 0.000002428 0.56587 18.5185
414 1R4A GNP 0.00000139 0.54499 18.7879
415 2C5L GTP 0.000008263 0.49623 19.0751
416 3T34 GDP 0.00003694 0.49191 19.2568
417 1YRB GDP 0.0000002751 0.52475 19.4656
418 5E95 GDP 0.000006151 0.54776 19.6429
419 1LFD GNP 0.000009986 0.50148 19.7605
420 4LJ9 ACP 0.002081 0.45231 19.764
421 1W5T ANP 0.0002051 0.4417 19.7987
422 1W5T ADP 0.0003214 0.42213 19.7987
423 1CLU DBG 0.000018 0.52711 19.8795
424 2UZI GTP 0.000008061 0.50513 19.8795
425 3DDC GNP 0.0000178 0.50433 19.8795
426 1WQ1 GDP 0.00001687 0.49482 19.8795
427 1NVV GNP 0.00001417 0.4874 19.8795
428 1Z0K GTP 0.00001336 0.51018 20.3488
429 2IXE ATP 0.001626 0.41067 20.6081
430 1NJF AGS 0.00002122 0.48396 20.8
431 1NJF ADP 0.00002707 0.46731 20.8
432 3IIJ ADP 0.000007925 0.57131 21.1111
433 1UKZ ADP 0.005157 0.41157 21.1823
434 4B47 GDP 0.0000009157 0.62681 21.2838
435 5UFQ GNP 0.000003921 0.51734 21.3115
436 5J1S ATP 0.0005546 0.43953 21.4789
437 2HCJ GDP 0.0000005727 0.63709 21.6216
438 4IEE AGS 0.0001305 0.5182 21.8121
439 2HV8 GTP 0.00002473 0.4862 21.875
440 1CXZ GSP 0.00003418 0.47667 22.093
441 3DZD ADP 0.0001325 0.49328 22.8188
442 2XTN GTP 0.000005531 0.51432 23.0769
443 3GJ5 GDP 0.000001691 0.59577 23.5294
444 5KDO GDP 0.00003756 0.50159 24.3243
445 2CBZ ATP 0.000001133 0.65502 24.4726
446 1GOT GDP 0.00005751 0.46944 24.6575
447 2W83 GTP 0.000005485 0.5147 24.6753
448 3FYH ADP 0.002691 0.4117 25.1678
449 2GK6 ADP 0.00005733 0.40688 25.3378
450 4HI0 GDP 0.000004744 0.50474 25.6281
451 4H1V GNP 0.00001522 0.47482 26.1745
452 2XAU ADP 0.001217 0.45373 26.1745
453 1Z0A GDP 0.000001069 0.59707 27.0115
454 2GDJ ANP 0.0002196 0.40501 28.4091
455 5UWU GNP 0.00002109 0.48138 30
456 2HF9 GSP 0.00004982 0.47446 30.0885
457 3BC1 GNP 0.000007113 0.51849 30.5085
458 2D7C GTP 0.00001576 0.50441 30.9524
459 4ZI2 GNP 0.000003503 0.53993 31.0526
460 1J2J GTP 0.00000681 0.52227 31.1111
461 4GOJ GNP 0.000003 0.54277 31.2169
462 3ZS9 ADP ALF 0.00003993 0.48994 31.5789
463 1GUA GNP 0.00001129 0.49122 33.3333
464 3KUD GDP 0.00001406 0.48479 34.5679
465 2VOH CIT 0.02241 0.42739 34.6154
466 3QBT GNP 0.000008985 0.50341 35.7143
467 5UWW GNP 0.00002191 0.48077 38.0952
468 3QF7 ANP 0.0006701 0.45195 40
469 3WY9 GDP 0.000001613 0.61441 43.75
Pocket No.: 3; Query (leader) PDB : 5L3S; Ligand: G; Similar sites found: 140
This union binding pocket(no: 3) in the query (biounit: 5l3s.bio4) has 12 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5FII PHE 0.01175 0.40835 None
2 4TMZ GSP 0.03423 0.40121 2.01342
3 1VKJ A3P 0.0208 0.41354 2.10526
4 5EP2 AZU 0.03412 0.40072 2.73438
5 5WRI A3P 0.01159 0.42631 3.04054
6 5WRJ A3P 0.01616 0.42105 3.04054
7 4WEI GLC GAL 0.0002461 0.49829 3.2491
8 3ZZH ARG 0.008444 0.41852 3.3557
9 2B4D COA 0.03393 0.40069 3.50877
10 4GOX A3P 0.00986 0.43441 3.69128
11 4WZ6 ATP 0.004893 0.41059 3.7931
12 4PFO ADP 0.01183 0.43084 3.80711
13 1T8U A3P 0.02262 0.41056 4.04412
14 1GOJ ADP 0.005614 0.41916 4.05405
15 1KSH GDP 0.01959 0.41105 4.30108
16 3NC9 TR3 0.0244 0.43039 4.36242
17 4J36 1HR 0.02554 0.42893 4.36242
18 2BVN GNP 0.01943 0.40623 4.36242
19 2GCN GDP 0.01728 0.41743 4.47761
20 2GCO GNP 0.01383 0.41694 4.47761
21 1Q3Q ANP 0.04435 0.40176 4.69799
22 1KMQ GNP 0.01691 0.41945 4.8913
23 1RYH GNP 0.01679 0.40735 4.92611
24 4XOI GTP 0.0202 0.41662 5
25 5MEX SZZ 0.03325 0.41765 5.03356
26 5MEX PAP 0.01604 0.41475 5.03356
27 1OS1 ATP 0.02188 0.41818 5.06757
28 1OS1 PYR 0.0233 0.41814 5.06757
29 2CWH PYC 0.04016 0.40561 5.06757
30 2CWH NDP 0.03351 0.40561 5.06757
31 4KFU ACP 0.002427 0.44145 5.18868
32 4D42 NAP 0.0282 0.43312 5.31915
33 4D42 W0I 0.0282 0.43312 5.31915
34 3LOO B4P 0.03004 0.42312 5.36913
35 4EIL NDP 0.04636 0.40224 5.36913
36 1OW3 GDP 0.0171 0.41184 5.3719
37 1FP6 ADP 0.01697 0.4141 5.53633
38 2WIC GNP 0.01078 0.41664 5.61798
39 4JWH SAH 0.04003 0.4029 5.7047
40 4J0Q GDP 0.01953 0.40044 5.74324
41 5X40 ACP 0.002942 0.45882 5.82192
42 1SVM ATP 0.04171 0.42109 6.04027
43 3FWY ADP 0.02821 0.40032 6.04027
44 1OE0 TTP 0.02493 0.41225 6.08696
45 1LVW TYD 0.00908 0.41653 6.1017
46 1DJL NAP 0.03906 0.40245 6.28019
47 3FVQ ATP 0.02353 0.40607 6.37584
48 5M7P ADP 0.01305 0.4211 6.41892
49 2WHX ADP 0.003831 0.42813 6.71141
50 1D4O NAP 0.0287 0.4039 7.06522
51 1JWY ADP 0.007539 0.42645 7.09459
52 1XPJ TLA 0.003404 0.42284 7.14286
53 5HR5 ADP 0.01012 0.42297 7.38255
54 2C77 GNP 0.02474 0.40601 7.43243
55 2ODE ALF GDP 0.04448 0.40262 7.43243
56 2ZE7 DST 0.0268 0.41049 7.50988
57 2ZE7 AMP 0.02895 0.40747 7.50988
58 4M4K XYP XYP 0.01799 0.41196 7.66551
59 4M4K GDU 0.01799 0.41196 7.66551
60 1X6V ADP 0.02094 0.41791 7.77027
61 2VVG ADP 0.007425 0.41018 7.77027
62 1GRN GDP 0.02146 0.40639 7.77027
63 3TKL GTP 0.03845 0.40007 7.86517
64 4TMK T5A 0.02291 0.41912 7.98122
65 2ABS ACP 0.01158 0.44669 8.05369
66 5I0H ADP BEF 0.01116 0.42325 8.10811
67 4YC7 GNP 0.01795 0.41591 8.10811
68 4A34 FUL 0.01639 0.40284 8.16327
69 5EE5 GTP 0.01433 0.42018 8.18713
70 5HPY GDP 0.01956 0.40958 8.18966
71 3KTA AP5 0.02163 0.40513 8.24176
72 1TU3 GNP 0.02538 0.41067 8.77193
73 1R2Q GNP 0.04358 0.40675 8.82353
74 1Z6T ADP 0.0189 0.41027 9.0604
75 4NON GDP 0.01976 0.42064 9.23077
76 1L2T ATP 0.02081 0.41341 9.3617
77 1Z83 AP5 0.03632 0.41271 9.69388
78 4FJU NAI 0.008218 0.44547 9.73154
79 1T5C ADP 0.004213 0.41156 9.73154
80 5G41 AP5 0.02618 0.43052 9.86547
81 3UIE ANP 0.01775 0.40629 10
82 5KUT GDP 0.01457 0.40878 10.0529
83 2J5V PCA 0.01091 0.41252 10.0671
84 1F6B GDP 0.01306 0.41174 10.101
85 1RM6 PCD 0.01547 0.43416 10.1351
86 1OXV ANP 0.005361 0.4271 10.1351
87 2JAQ DCP 0.01076 0.42837 10.2439
88 3PQC GDP 0.01592 0.40924 10.2564
89 3WXM GTP 0.02363 0.41369 10.473
90 2PZE ATP 0.004674 0.42205 10.4803
91 4NU0 AP5 0.02174 0.42885 10.5991
92 4MKF AP5 0.02445 0.42778 10.5991
93 5H56 ADP 0.02691 0.41482 10.7692
94 5H56 TYD 0.02691 0.41482 10.7692
95 1O3Y GTP 0.006395 0.44127 10.8434
96 2J59 GTP 0.008394 0.43431 10.8434
97 1M7G ADP 0.01101 0.43609 10.9005
98 1M7G ADX 0.01373 0.43287 10.9005
99 1M7G AV2 0.00705 0.42148 10.9005
100 1PN0 IPH 0.03121 0.42289 10.9774
101 1PN0 FAD 0.03031 0.42289 10.9774
102 4YLG GDP 0.00637 0.43499 10.9827
103 2OFW ADX 0.01761 0.43313 11.0577
104 3LRE ADP 0.01014 0.40227 11.0738
105 2X06 NAD 0.02197 0.41718 11.1486
106 2VG1 FPP 0.03105 0.40478 11.4035
107 5LTJ ADP 0.01674 0.40655 11.4094
108 3AQ4 GDP 0.005193 0.43336 11.413
109 4PPF FLC 0.001235 0.46037 12.2857
110 2BME GNP 0.03637 0.40245 12.5
111 2WJH GDP 0.008022 0.42231 12.6506
112 2WJH FLC 0.01404 0.41234 12.6506
113 2VB6 ADP BEF 0.008026 0.43618 12.7517
114 3GJX GTP 0.03096 0.40952 12.8378
115 3ZIA ATP 0.01839 0.40451 12.8378
116 1ZIN AP5 0.0301 0.42154 12.9032
117 4U5X GNP 0.01762 0.41267 12.9213
118 4BAS GNP 0.02613 0.40627 13.0653
119 4RD0 GDP 0.01241 0.4244 13.1757
120 3A1S GDP 0.01615 0.40642 13.5135
121 2V7Q ATP 0.01977 0.40499 13.6364
122 4ZKD GDP 0.01313 0.42896 13.8514
123 1HTW ADP 0.01206 0.41268 13.9241
124 4ZG4 VO4 ADP 0.005991 0.44326 14.094
125 3Q8G PEE 0.04063 0.4229 14.094
126 2ZR9 DTP 0.01427 0.40762 14.4295
127 3A4M ADP 0.006116 0.42101 14.6154
128 3RAB GNP 0.03928 0.40025 17.1598
129 1YRB GDP 0.02529 0.40072 19.4656
130 1CLU DBG 0.03402 0.41974 19.8795
131 2IXE ATP 0.009876 0.42791 20.6081
132 1UKZ ADP 0.02042 0.42681 21.1823
133 1CXZ GSP 0.008001 0.43567 22.093
134 2XTN GTP 0.02693 0.40561 23.0769
135 4G86 BNT 0.0001029 0.50057 24.2958
136 2W83 GTP 0.006859 0.43947 24.6753
137 4HI0 GDP 0.01732 0.41442 25.6281
138 2GDJ ANP 0.01346 0.40943 28.4091
139 3ZS9 ADP ALF 0.03524 0.40273 31.5789
140 4KVX ACO 0.02786 0.41445 39.7436
Pocket No.: 4; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: 5
This union binding pocket(no: 4) in the query (biounit: 5l3s.bio2) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2GMV UN8 0.001768 0.40379 4.72973
2 1Q8Q MAN MMA 0.01234 0.42497 4.7619
3 1Q8S MAN MMA 0.01689 0.4167 4.7619
4 2WHX ADP 0.00004996 0.40015 6.71141
5 3AYI HCI 0.02492 0.40004 8.78378
Pocket No.: 5; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 5l3s.bio2) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 5L3S; Ligand: G; Similar sites found: 3
This union binding pocket(no: 6) in the query (biounit: 5l3s.bio2) has 13 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1N62 FAD 0.02956 0.4206 11.745
2 1OBV FMN 0.03127 0.40035 22.4852
3 4M38 SAH 0.01245 0.42222 33.3333
Pocket No.: 7; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 5l3s.bio3) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 5L3S; Ligand: G; Similar sites found: 16
This union binding pocket(no: 8) in the query (biounit: 5l3s.bio3) has 12 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5TSH ANP 0.01651 0.40485 2.7027
2 4CLI 5P8 0.04524 0.4084 4.36242
3 3WGT FAD 0.04328 0.41798 5.03356
4 3WGT QSC 0.04451 0.41798 5.03356
5 1BG2 ADP 0.006283 0.404 5.03356
6 4D0N GDP 0.0181 0.40177 5.36913
7 1P3D ANP 0.03036 0.40218 6.31579
8 5IRN ADP 0.02209 0.40414 6.41892
9 1G6H ADP 0.006144 0.40468 6.61479
10 2QEN ADP 0.02553 0.40277 6.71141
11 1Y63 ADP 0.0165 0.40251 7.06522
12 4DID GDP 0.02176 0.40006 8.10811
13 1VG8 GNP 0.04048 0.4013 8.21256
14 4FJU GLV 0.04995 0.40429 9.73154
15 3ZIA ADP 0.02591 0.40043 12.8378
16 3FYH ADP 0.03773 0.40085 25.1678
Pocket No.: 9; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 5l3s.bio3) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: 2
This union binding pocket(no: 10) in the query (biounit: 5l3s.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3E1T FAD 0.01474 0.40325 10.7383
2 2PZ8 APC 0.007159 0.4003 15.8451
Pocket No.: 11; Query (leader) PDB : 5L3S; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 5l3s.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 5L3S; Ligand: G; Similar sites found: 8
This union binding pocket(no: 12) in the query (biounit: 5l3s.bio1) has 12 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4ZAD 4LU 0.04015 0.40098 3.71622
2 2Y65 ADP 0.007144 0.40243 7.09459
3 1Z06 GNP 0.03749 0.40079 8.99471
4 4TTQ ATP 0.01137 0.41286 10.6977
5 5MVR ADP 0.006783 0.42329 11.1111
6 4HAT GNP 0.04352 0.40065 14.4295
7 3BC1 GNP 0.03672 0.40326 30.5085
8 2D7C GTP 0.03993 0.40081 30.9524
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