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Receptor
PDB id Resolution Class Description Source Keywords
5M3Z 1.45 Å EC: 4.4.1.11 CRYSTAL STRUCTURE OF CITROBACTER FREUNDII METHIONINE GAMMA-L C115H REPLACEMENT IN THE COMPLEX WITH L-NORLEUCINE CITROBACTER FREUNDII METHIONINE GAMMA-LYASE C115H SUBSTITUTION L-NORLEUCINE LY
Ref.: CRYSTAL STRUCTURE OF MUTANT FORM CYS115HIS OF CITRO FREUNDII METHIONINE GAMMA-LYASE COMPLEXED WITH L-NO BIOCHIM. BIOPHYS. ACTA V.1865 1123 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PLP A:401;
Valid;
Atoms found LESS than expected: % Diff = 0;
submit data
247.142 C8 H10 N O6 P Cc1c(...
PGE A:403;
Invalid;
none;
submit data
150.173 C6 H14 O4 C(COC...
PY6 A:404;
Valid;
none;
submit data
362.315 C14 H23 N2 O7 P CCCC[...
NLE A:402;
Valid;
none;
Ki = 0.6 mM
131.173 C6 H13 N O2 CCCC[...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5M3Z 1.45 Å EC: 4.4.1.11 CRYSTAL STRUCTURE OF CITROBACTER FREUNDII METHIONINE GAMMA-L C115H REPLACEMENT IN THE COMPLEX WITH L-NORLEUCINE CITROBACTER FREUNDII METHIONINE GAMMA-LYASE C115H SUBSTITUTION L-NORLEUCINE LY
Ref.: CRYSTAL STRUCTURE OF MUTANT FORM CYS115HIS OF CITRO FREUNDII METHIONINE GAMMA-LYASE COMPLEXED WITH L-NO BIOCHIM. BIOPHYS. ACTA V.1865 1123 2017
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 5M3Z Ki = 0.6 mM NLE C6 H13 N O2 CCCC[C@@H]....
2 4HF8 - PLG C10 H15 N2 O7 P Cc1c(c(c(c....
3 3MKJ - PZP C8 H11 N2 O5 P [H]/N=C/c1....
4 4OMA - LCS C11 H14 N3 O7 P Cc1c(c(c(c....
70% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 3VK3 - MET C5 H11 N O2 S CSCC[C@@H]....
2 5X2X - 4LM C12 H15 N2 O7 P C/C=C(C(=O....
3 5X2Z - 3LM C13 H19 N2 O7 P S Cc1c(c(c(c....
4 5M3Z Ki = 0.6 mM NLE C6 H13 N O2 CCCC[C@@H]....
5 4HF8 - PLG C10 H15 N2 O7 P Cc1c(c(c(c....
6 3MKJ - PZP C8 H11 N2 O5 P [H]/N=C/c1....
7 4OMA - LCS C11 H14 N3 O7 P Cc1c(c(c(c....
50% Homology Family (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 3VK3 - MET C5 H11 N O2 S CSCC[C@@H]....
2 5X2X - 4LM C12 H15 N2 O7 P C/C=C(C(=O....
3 5X2Z - 3LM C13 H19 N2 O7 P S Cc1c(c(c(c....
4 1E5F - PLP C8 H10 N O6 P Cc1c(c(c(c....
5 4IY7 - KOU C11 H15 N2 O8 P Cc1c(c(c(c....
6 5M3Z Ki = 0.6 mM NLE C6 H13 N O2 CCCC[C@@H]....
7 4HF8 - PLG C10 H15 N2 O7 P Cc1c(c(c(c....
8 3MKJ - PZP C8 H11 N2 O5 P [H]/N=C/c1....
9 4OMA - LCS C11 H14 N3 O7 P Cc1c(c(c(c....
10 1CL2 - PPG C14 H20 N3 O8 P Cc1c(c(c(c....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PLP; Similar ligands found: 62
No: Ligand ECFP6 Tc MDL keys Tc
1 PLP 1 1
2 PZP 0.729167 0.843137
3 EXT 0.62069 0.8
4 AN7 0.603448 0.918367
5 EPC 0.603448 0.862745
6 FOO 0.59322 0.849057
7 PLR 0.58 0.895833
8 4LM 0.57377 0.818182
9 0JO 0.57377 0.803571
10 P3D 0.571429 0.704918
11 F0G 0.564516 0.865385
12 MPM 0.564516 0.814815
13 FEV 0.555556 0.803571
14 KOU 0.555556 0.836364
15 HCP 0.546875 0.77193
16 EVM 0.546875 0.821429
17 6DF 0.545455 0.811321
18 PXL 0.541667 0.659574
19 Z98 0.537313 0.75
20 PXP 0.537037 0.862745
21 PMP 0.527273 0.767857
22 P0P 0.527273 0.916667
23 PL6 0.522388 0.818182
24 GT1 0.517857 0.830189
25 PFM 0.514706 0.803571
26 FEJ 0.514706 0.851852
27 LLP 0.5 0.737705
28 P70 0.5 0.833333
29 PUS 0.479452 0.707692
30 PL5 0.479452 0.775862
31 MPL 0.473684 0.836364
32 PLG 0.46875 0.75
33 IN5 0.46875 0.758621
34 P89 0.466667 0.714286
35 PLP PUT 0.463768 0.672131
36 EQJ 0.460526 0.725806
37 5DK 0.460526 0.725806
38 O1G 0.454545 0.75
39 PLT 0.439024 0.762712
40 X04 0.431034 0.851852
41 PDD 0.426471 0.762712
42 PP3 0.426471 0.762712
43 PDA 0.426471 0.762712
44 P1T 0.426471 0.714286
45 33P 0.42029 0.745763
46 IK2 0.42029 0.714286
47 TLP 0.414286 0.793103
48 2BK 0.414286 0.793103
49 PLS 0.414286 0.779661
50 2BO 0.414286 0.793103
51 5PA 0.414286 0.714286
52 PMH 0.414286 0.619718
53 9TD 0.413793 0.671642
54 PLP 999 0.410959 0.796296
55 PPD 0.408451 0.75
56 C6P 0.408451 0.75
57 QLP 0.405405 0.681818
58 MP5 0.403509 0.666667
59 PLA 0.402778 0.703125
60 PY5 0.402778 0.703125
61 HEY 0.4 0.703125
62 PLP PHE 0.4 0.732143
Ligand no: 2; Ligand: PY6; Similar ligands found: 62
No: Ligand ECFP6 Tc MDL keys Tc
1 PY6 1 1
2 PY5 0.850746 0.969231
3 ORX 0.816901 0.924242
4 N5F 0.816901 0.924242
5 PE1 0.805556 0.924242
6 PL4 0.783784 0.924242
7 PDG 0.774648 0.909091
8 PGU 0.774648 0.909091
9 7XF 0.774648 0.909091
10 QLP 0.763889 0.857143
11 LPI 0.763889 0.926471
12 PLS 0.742857 0.878788
13 C6P 0.732394 0.878788
14 PPD 0.732394 0.878788
15 PP3 0.666667 0.892308
16 PDD 0.666667 0.892308
17 PDA 0.666667 0.892308
18 ILP 0.657895 0.923077
19 2BK 0.648649 0.863636
20 2BO 0.648649 0.863636
21 TLP 0.648649 0.863636
22 AQ3 0.604651 0.828571
23 IN5 0.60274 0.861538
24 76U 0.6 0.867647
25 PLG 0.581081 0.850746
26 KAM 0.576471 0.924242
27 P1T 0.558442 0.84058
28 CBA 0.555556 0.8
29 EA5 0.554217 0.869565
30 IK2 0.551282 0.814286
31 5PA 0.544304 0.867647
32 33P 0.531646 0.820895
33 PLA 0.530864 0.910448
34 PMG 0.511905 0.940298
35 HEY 0.505882 0.855072
36 PSZ 0.5 0.743243
37 3LM 0.5 0.830986
38 PL2 0.494118 0.802817
39 DCS 0.494118 0.7125
40 PXP 0.492958 0.727273
41 PMH 0.487805 0.654321
42 PMP 0.486111 0.787879
43 PXG 0.483146 0.797101
44 RW2 0.483146 0.816901
45 GT1 0.479452 0.705882
46 PL8 0.477778 0.776316
47 PPE 0.465116 0.895522
48 7TS 0.465116 0.662651
49 9YM 0.444444 0.774648
50 7B9 0.43617 0.808219
51 CAN PLP 0.423913 0.816901
52 PLR 0.416667 0.692308
53 0JO 0.416667 0.690141
54 Z98 0.41573 0.797101
55 PLP 2KZ 0.413793 0.768116
56 F0G 0.411765 0.731343
57 LLP 0.408602 0.838235
58 KOU 0.406977 0.764706
59 FEV 0.406977 0.714286
60 PL6 0.404494 0.75
61 4LM 0.4 0.7
62 PPG 0.4 0.814286
Ligand no: 3; Ligand: NLE; Similar ligands found: 44
No: Ligand ECFP6 Tc MDL keys Tc
1 NLE 1 1
2 API 0.62963 0.724138
3 NVA 0.62963 0.92
4 ORN 0.566667 0.724138
5 DBB 0.538462 0.8
6 ABA 0.538462 0.8
7 DLY 0.53125 0.7
8 11C 0.53125 0.724138
9 UN1 0.53125 0.724138
10 6CL 0.529412 0.7
11 DHH 0.515152 0.7
12 LYS 0.515152 0.677419
13 MLZ 0.5 0.705882
14 NPI 0.5 0.7
15 MLY 0.5 0.631579
16 3AR 0.487805 0.631579
17 26P 0.485714 0.65625
18 DAB 0.482759 0.645161
19 HSE 0.482759 0.625
20 LN6 0.477273 0.694444
21 VIO 0.47619 0.648649
22 HCS 0.466667 0.689655
23 ALY 0.461538 0.638889
24 ILO 0.461538 0.657143
25 2NP 0.459459 0.6
26 ONL 0.454545 0.793103
27 MET 0.441176 0.766667
28 MED 0.441176 0.766667
29 MSE 0.441176 0.741935
30 GLU 0.4375 0.689655
31 GGL 0.4375 0.689655
32 GLN 0.4375 0.625
33 DGL 0.4375 0.689655
34 DGN 0.4375 0.625
35 MT2 0.432432 0.666667
36 LEU 0.419355 0.740741
37 C2N 0.413793 0.642857
38 DCY 0.413793 0.62069
39 CYS 0.413793 0.62069
40 REZ 0.409091 0.611111
41 2FM 0.405405 0.625
42 MEQ 0.405405 0.647059
43 JM7 0.404255 0.615385
44 JM5 0.4 0.6
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5M3Z; Ligand: PLP; Similar sites found with APoc: 142
This union binding pocket(no: 1) in the query (biounit: 5m3z.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
1 1RV1 IMZ None
2 6BKK 308 None
3 1DFO PLG 1.50754
4 1ZC9 PMP 1.50754
5 4UOX PLP 1.50754
6 4ZM4 PLP 1.50754
7 1FC4 AKB PLP 1.75879
8 2X5F PLP 1.75879
9 4ADC PLP 1.75879
10 2AWN ADP 1.83727
11 3FRK TQP 1.87668
12 1SFF IK2 2.01005
13 2FNU PMP UD1 2.13333
14 6FYQ PLP 2.26131
15 5DDW 5B6 2.26131
16 1JU4 BEZ 2.26131
17 3BWN PMP 2.30179
18 3BWN PMP PHE 2.30179
19 1LC8 33P 2.47253
20 3PDB PMP 2.51256
21 5KGS 6SR 2.51256
22 1OXO IK2 2.51256
23 2HHP FLC 2.51256
24 4OKD GLC GLC GLC 2.51256
25 3PD6 PMP 2.51256
26 1U26 IHS 2.67062
27 2ZC0 PMP 2.76382
28 5WYF ILP 2.76382
29 3LTW HLZ 2.85714
30 4HVK PMP 2.87958
31 6BYF CIT 2.94118
32 5GVL PLG 3.01508
33 5GVL GI8 3.01508
34 4RKC PMP 3.01508
35 2ZYJ PGU 3.02267
36 6ECG PM9 3.26633
37 6DND PLP 3.26633
38 4E3Q PMP 3.26633
39 2TPL HPP 3.26633
40 4ZSY RW2 3.26633
41 1DJ9 KAM 3.38542
42 5G09 6DF 3.51759
43 4OE4 NAD 3.51759
44 4OKE AMP 3.57143
45 3B9Q MLI 3.64238
46 1MLY ACZ PLP 3.7296
47 2R2N PMP 3.76884
48 3A8U PLP 3.76884
49 2R2N KYN 3.76884
50 4ZAH T5K 3.78788
51 1O69 X04 3.80711
52 5U23 TQP 4.0201
53 2OAT PFM 4.0201
54 4D4U FUC NDG GAL FUC 4.12698
55 3QDV A2G 4.1958
56 3QDW A2G 4.1958
57 3QDY A2G GAL 4.1958
58 3VP6 HLD 4.27136
59 3LN9 FLC 4.31655
60 4Z3X 4KX 4.46927
61 4Z3X MTE 4.46927
62 1M7Y PPG 4.52261
63 2CJH AKG 4.77387
64 4B98 PXG 4.77387
65 4WOH 4NP 4.81928
66 6CD1 PLS 5.02513
67 5W19 9TD 5.02513
68 6CD1 PLG 5.02513
69 2WK9 PLG 5.14139
70 2WK9 PLP 5.14139
71 5YKT PMP 5.27638
72 1XI9 PLP 5.52764
73 5IWQ PLP 5.52764
74 1TOI HCI 5.55556
75 3NUB UD0 5.84958
76 4AG9 16G 6.06061
77 3DR4 G4M 6.13811
78 4BA5 PXG 6.28141
79 5WHU SIA GAL GLC 6.71141
80 1AJS PLA 6.78392
81 1Y4Z PCI 6.78392
82 5GVR LMR 6.83761
83 3C8F MT2 6.93878
84 6C8T EQJ 7.44681
85 6C9B EGV 7.44681
86 6C92 EQJ 7.44681
87 1GEX PLP HSA 7.58427
88 4AOA IK2 7.78894
89 4OB6 S2T 7.91789
90 4TVD BGC 8.0402
91 6EWR PMP 8.29146
92 3ZRR PXG 8.33333
93 2JBM SRT 8.3612
94 1GDE GLU PLP 8.74036
95 2HOX P1T 9.04523
96 2PO3 T4K 9.04523
97 5W70 9YM 9.29648
98 4FL0 PLP 9.29648
99 3BS8 PMP 9.29648
100 1M32 PLP 9.56284
101 1U08 PLP 9.58549
102 6GNO XDI 9.62963
103 2Z9V PXM 9.69388
104 5YW0 SIN 9.74843
105 4K2M O1G 10.0503
106 1WYV PLP AOA 10.5528
107 4UHO PLP 10.804
108 6C3C EJ1 11.3065
109 4R5Z SIN 11.4441
110 4R5Z PMP 11.4441
111 6CZY PMP 11.8785
112 3B8X G4M 12.0513
113 2R5E QLP 12.0603
114 2R5C C6P 12.0603
115 2X5D PLP 12.5628
116 1UU1 PMP HSA 13.1343
117 3CQ5 PMP 13.2791
118 2XBN PMP 13.5678
119 2OGA PGU 13.7845
120 1VJO PLP 13.8191
121 5TXR PLP 14.3216
122 4JE5 PLP 14.5729
123 4JE5 PMP 14.5729
124 5VEQ PMP 14.8241
125 5K8B PDG 15.3266
126 2OFD NGA 15.493
127 3EI9 PL6 16.3317
128 1B9I PXG 17.268
129 5W71 PLP 17.3367
130 5W71 9YM 17.3367
131 1GCK ASP PLP 18.4416
132 1MDZ PLP 20.8651
133 1MDZ DCS 20.8651
134 3O01 DXC 23.0519
135 4M2K PLP 23.1156
136 4WXG 2BO 23.8318
137 1LW4 PLP 24.4957
138 1LW4 TLP 24.4957
139 3WGC PLG 25.5132
140 4LNL PLG 26.4264
141 4LNL 2BK 26.4264
142 4LNL 2BO 26.4264
Pocket No.: 2; Query (leader) PDB : 5M3Z; Ligand: PLP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5m3z.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 5M3Z; Ligand: PLP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 5m3z.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 5M3Z; Ligand: PLP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 5m3z.bio1) has 22 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 5M3Z; Ligand: PY6; Similar sites found with APoc: 146
This union binding pocket(no: 5) in the query (biounit: 5m3z.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
1 1RV1 IMZ None
2 6BKK 308 None
3 1DFO PLG 1.50754
4 1ZC9 PMP 1.50754
5 4UOX PLP 1.50754
6 4ZM4 PLP 1.50754
7 1FC4 AKB PLP 1.75879
8 2X5F PLP 1.75879
9 4ADC PLP 1.75879
10 2AWN ADP 1.83727
11 3FRK TQP 1.87668
12 1SFF IK2 2.01005
13 2FNU PMP UD1 2.13333
14 1JT2 FER 2.23881
15 6FYQ PLP 2.26131
16 5DDW 5B6 2.26131
17 3BWN PMP 2.30179
18 3BWN PMP PHE 2.30179
19 1LC8 33P 2.47253
20 3PD6 PMP 2.51256
21 3PDB PMP 2.51256
22 5KGS 6SR 2.51256
23 1OXO IK2 2.51256
24 2HHP FLC 2.51256
25 4OKD GLC GLC GLC 2.51256
26 5VFC 9BA 2.57235
27 1WOG 16D 2.62295
28 1U26 IHS 2.67062
29 2ZC0 PMP 2.76382
30 5WYF ILP 2.76382
31 3LTW HLZ 2.85714
32 4HVK PMP 2.87958
33 6BYF CIT 2.94118
34 5GVL GI8 3.01508
35 5GVL PLG 3.01508
36 4RKC PMP 3.01508
37 2ZYJ PGU 3.02267
38 2OG2 MLI 3.06407
39 6ECG PM9 3.26633
40 6DND PLP 3.26633
41 4E3Q PMP 3.26633
42 4ZSY RW2 3.26633
43 2TPL HPP 3.26633
44 1OYF MHN 3.30579
45 1DJ9 KAM 3.38542
46 5G09 6DF 3.51759
47 5A1S FLC 3.51759
48 4OKE AMP 3.57143
49 3B9Q MLI 3.64238
50 2R2N PMP 3.76884
51 3A8U PLP 3.76884
52 2R2N KYN 3.76884
53 4ZAH T5K 3.78788
54 1O69 X04 3.80711
55 1JQY A32 3.8835
56 5U23 TQP 4.0201
57 3FAX BGC GLC GLC 4.0201
58 2OAT PFM 4.0201
59 4D4U FUC NDG GAL FUC 4.12698
60 3QDV A2G 4.1958
61 3QDW A2G 4.1958
62 3QDY A2G GAL 4.1958
63 3VP6 HLD 4.27136
64 4LIT AKG 4.27136
65 3LN9 FLC 4.31655
66 1M7Y PPG 4.52261
67 2CJH AKG 4.77387
68 4B98 PXG 4.77387
69 4WOH 4NP 4.81928
70 5W19 9TD 5.02513
71 6CD1 PLS 5.02513
72 6CD1 PLG 5.02513
73 2WK9 PLG 5.14139
74 2WK9 PLP 5.14139
75 5YKT PMP 5.27638
76 1XI9 PLP 5.52764
77 5IWQ PLP 5.52764
78 1TOI HCI 5.55556
79 3NUB UD0 5.84958
80 4AG9 16G 6.06061
81 3DR4 G4M 6.13811
82 4BA5 PXG 6.28141
83 5WHU SIA GAL GLC 6.71141
84 3QPB URA 6.73759
85 1AJS PLA 6.78392
86 1Y4Z PCI 6.78392
87 3C8F MT2 6.93878
88 6C92 EQJ 7.44681
89 6C9B EGV 7.44681
90 6C8T EQJ 7.44681
91 1GEX PLP HSA 7.58427
92 4AOA IK2 7.78894
93 4OB6 S2T 7.91789
94 4TVD BGC 8.0402
95 1R6N 434 8.05687
96 6EWR PMP 8.29146
97 3ZRR PXG 8.33333
98 2JBM SRT 8.3612
99 1GDE GLU PLP 8.74036
100 2HOX P1T 9.04523
101 2PO3 T4K 9.04523
102 5W70 9YM 9.29648
103 4FL0 PLP 9.29648
104 3BS8 PMP 9.29648
105 1M32 PLP 9.56284
106 1U08 PLP 9.58549
107 6GNO XDI 9.62963
108 2Z9V PXM 9.69388
109 4K2M O1G 10.0503
110 1WYV PLP AOA 10.5528
111 4UHO PLP 10.804
112 6C3C EJ1 11.3065
113 4R5Z SIN 11.4441
114 4R5Z PMP 11.4441
115 6CZY PMP 11.8785
116 3B8X G4M 12.0513
117 2R5E QLP 12.0603
118 2R5C C6P 12.0603
119 2X5D PLP 12.5628
120 2HUI GLV 12.9771
121 1UU1 PMP HSA 13.1343
122 3CQ5 PMP 13.2791
123 2XBN PMP 13.5678
124 2OGA PGU 13.7845
125 1VJO PLP 13.8191
126 5TXR PLP 14.3216
127 4JE5 PLP 14.5729
128 4JE5 PMP 14.5729
129 5VEQ PMP 14.8241
130 5K8B PDG 15.3266
131 2OFD NGA 15.493
132 3EI9 PL6 16.3317
133 1B9I PXG 17.268
134 5W71 PLP 17.3367
135 5W71 9YM 17.3367
136 1GCK ASP PLP 18.4416
137 1MDZ DCS 20.8651
138 1MDZ PLP 20.8651
139 4M2K PLP 23.1156
140 4WXG 2BO 23.8318
141 1LW4 PLP 24.4957
142 1LW4 TLP 24.4957
143 3WGC PLG 25.5132
144 4LNL PLG 26.4264
145 4LNL 2BK 26.4264
146 4LNL 2BO 26.4264
Pocket No.: 6; Query (leader) PDB : 5M3Z; Ligand: PY6; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 5m3z.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 5M3Z; Ligand: PY6; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 5m3z.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 5M3Z; Ligand: PY6; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 5m3z.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 5M3Z; Ligand: NLE; Similar sites found with APoc: 139
This union binding pocket(no: 9) in the query (biounit: 5m3z.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
1 1RV1 IMZ None
2 6BKK 308 None
3 1DFO PLG 1.50754
4 4UOX PLP 1.50754
5 4ZM4 PLP 1.50754
6 1ZC9 PMP 1.50754
7 2X5F PLP 1.75879
8 1FC4 AKB PLP 1.75879
9 4ADC PLP 1.75879
10 2AWN ADP 1.83727
11 3FRK TQP 1.87668
12 1SFF IK2 2.01005
13 2FNU PMP UD1 2.13333
14 3K7S R52 2.23464
15 1JT2 FER 2.23881
16 6FYQ PLP 2.26131
17 5DDW 5B6 2.26131
18 3BWN PMP PHE 2.30179
19 3BWN PMP 2.30179
20 1LC8 33P 2.47253
21 3PD6 PMP 2.51256
22 3PDB PMP 2.51256
23 2HHP FLC 2.51256
24 1OXO IK2 2.51256
25 4OKD GLC GLC GLC 2.51256
26 1WOG 16D 2.62295
27 1U26 IHS 2.67062
28 2ZC0 PMP 2.76382
29 5WYF ILP 2.76382
30 3LTW HLZ 2.85714
31 4HVK PMP 2.87958
32 6BYF CIT 2.94118
33 5GVL PLG 3.01508
34 5GVL GI8 3.01508
35 4RKC PMP 3.01508
36 2ZYJ PGU 3.02267
37 2OG2 MLI 3.06407
38 6DND PLP 3.26633
39 6ECG PM9 3.26633
40 4E3Q PMP 3.26633
41 4ZSY RW2 3.26633
42 2TPL HPP 3.26633
43 1OYF MHN 3.30579
44 1DJ9 KAM 3.38542
45 5G09 6DF 3.51759
46 5A1S FLC 3.51759
47 4OKE AMP 3.57143
48 2R2N PMP 3.76884
49 3A8U PLP 3.76884
50 4ZAH T5K 3.78788
51 1O69 X04 3.80711
52 1JQY A32 3.8835
53 3FAX BGC GLC GLC 4.0201
54 5U23 TQP 4.0201
55 2OAT PFM 4.0201
56 4D4U FUC NDG GAL FUC 4.12698
57 3QDV A2G 4.1958
58 3QDW A2G 4.1958
59 3QDY A2G GAL 4.1958
60 3VP6 HLD 4.27136
61 4LIT AKG 4.27136
62 3LN9 FLC 4.31655
63 1M7Y PPG 4.52261
64 2CJH AKG 4.77387
65 4B98 PXG 4.77387
66 4WOH 4NP 4.81928
67 6CD1 PLG 5.02513
68 5W19 9TD 5.02513
69 6CD1 PLS 5.02513
70 2WK9 PLG 5.14139
71 2WK9 PLP 5.14139
72 5YKT PMP 5.27638
73 1XI9 PLP 5.52764
74 5IWQ PLP 5.52764
75 1TOI HCI 5.55556
76 3NUB UD0 5.84958
77 4AG9 16G 6.06061
78 3DR4 G4M 6.13811
79 4BA5 PXG 6.28141
80 5WHU SIA GAL GLC 6.71141
81 3QPB URA 6.73759
82 1Y4Z PCI 6.78392
83 1AJS PLA 6.78392
84 3C8F MT2 6.93878
85 6C92 EQJ 7.44681
86 6C8T EQJ 7.44681
87 1GEX PLP HSA 7.58427
88 4AOA IK2 7.78894
89 4OB6 S2T 7.91789
90 6EWR PMP 8.29146
91 3ZRR PXG 8.33333
92 2JBM SRT 8.3612
93 1GDE GLU PLP 8.74036
94 2HOX P1T 9.04523
95 2PO3 T4K 9.04523
96 5W70 9YM 9.29648
97 4FL0 PLP 9.29648
98 3BS8 PMP 9.29648
99 1M32 PLP 9.56284
100 1U08 PLP 9.58549
101 6GNO XDI 9.62963
102 2Z9V PXM 9.69388
103 4K2M O1G 10.0503
104 1WYV PLP AOA 10.5528
105 4UHO PLP 10.804
106 6C3C EJ1 11.3065
107 4R5Z SIN 11.4441
108 4R5Z PMP 11.4441
109 6CZY PMP 11.8785
110 3B8X G4M 12.0513
111 2R5E QLP 12.0603
112 2R5C C6P 12.0603
113 2X5D PLP 12.5628
114 2HUI GLV 12.9771
115 1UU1 PMP HSA 13.1343
116 3CQ5 PMP 13.2791
117 2XBN PMP 13.5678
118 2OGA PGU 13.7845
119 1VJO PLP 13.8191
120 5TXR PLP 14.3216
121 4JE5 PLP 14.5729
122 4JE5 PMP 14.5729
123 5VEQ PMP 14.8241
124 5K8B PDG 15.3266
125 2OFD NGA 15.493
126 1B9I PXG 17.268
127 5W71 PLP 17.3367
128 5W71 9YM 17.3367
129 1GCK ASP PLP 18.4416
130 1MDZ DCS 20.8651
131 1MDZ PLP 20.8651
132 4M2K PLP 23.1156
133 4WXG 2BO 23.8318
134 1LW4 PLP 24.4957
135 1LW4 TLP 24.4957
136 3WGC PLG 25.5132
137 4LNL PLG 26.4264
138 4LNL 2BK 26.4264
139 4LNL 2BO 26.4264
Pocket No.: 10; Query (leader) PDB : 5M3Z; Ligand: NLE; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 5m3z.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 5M3Z; Ligand: NLE; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 5m3z.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 5M3Z; Ligand: NLE; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 5m3z.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
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