Receptor
PDB id Resolution Class Description Source Keywords
5MOF 1.45 Å NON-ENZYME: OTHER ETHYLENE FORMING ENZYME FROM PSEUDOMONAS SYRINGAE PV. PHASEO I222 CRYSTAL FORM IN COMPLEX WITH MANGANESE AND 2-OXOGLUTAR PSEUDOMONAS SAVASTANOI PV. PHASEOLICOLORGANISM_TAXID: 319 2-OXOGLUTARATE AND FERROUS IRON DEPENDENT OXYGENASE ETHYLENFORMING DOUBLE STRANDED BETA HELIX OXIDOREDUCTASE
Ref.: STRUCTURAL AND STEREOELECTRONIC INSIGHTS INTO OXYGENASE-CATALYZED FORMATION OF ETHYLENE FROM 2-OXOGLUTARATE. PROC. NATL. ACAD. SCI. V. 114 4667 2017 U.S.A.
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MN A:401;
A:402;
Part of Protein;
Part of Protein;
none;
none;
submit data
54.938 Mn [Mn+2...
GOL A:406;
A:407;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
CL A:403;
Invalid;
none;
submit data
35.453 Cl [Cl-]
AKG A:404;
A:405;
Valid;
Valid;
none;
Atoms found LESS than expected: % Diff = 0.4;
submit data
146.098 C5 H6 O5 C(CC(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5LUN 1.08 Å NON-ENZYME: OTHER ETHYLENE FORMING ENZYME FROM PSEUDOMONAS SYRINGAE PV. PHASEO P1 ULTRA-HIGH RESOLUTION CRYSTAL FORM IN COMPLEX WITH IRON,O XALYLGLYCINE AND ARGININE PSEUDOMONAS SAVASTANOI PV. PHASEOLICOLORGANISM_TAXID: 319 2-OXOGLUTARATE AND FERROUS IRON DEPENDENT OXYGENASE ETHYLENFORMING DOUBLE STRANDED BETA HELIX OXIDOREDUCTASE
Ref.: STRUCTURAL AND STEREOELECTRONIC INSIGHTS INTO OXYGENASE-CATALYZED FORMATION OF ETHYLENE FROM 2-OXOGLUTARATE. PROC. NATL. ACAD. SCI. V. 114 4667 2017 U.S.A.
Members (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 5V32 - MLT C4 H6 O5 C([C@H](C(....
2 5VKA - AKG C5 H6 O5 C(CC(=O)O)....
3 5V2T - TLA C4 H6 O6 [C@@H]([C@....
4 5VKB - AAR C6 H16 N5 O C(C[C@@H](....
5 5V31 - ARG C6 H15 N4 O2 C(C[C@@H](....
6 5V2X - AKG C5 H6 O5 C(CC(=O)O)....
7 5LUN - OGA C4 H5 N O5 C(C(=O)O)N....
8 5V2Y - ARG C6 H15 N4 O2 C(C[C@@H](....
9 5V2Z - ARG C6 H15 N4 O2 C(C[C@@H](....
10 5V34 - ARG C6 H15 N4 O2 C(C[C@@H](....
11 5MOF - AKG C5 H6 O5 C(CC(=O)O)....
70% Homology Family (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 5V32 - MLT C4 H6 O5 C([C@H](C(....
2 5VKA - AKG C5 H6 O5 C(CC(=O)O)....
3 5V2T - TLA C4 H6 O6 [C@@H]([C@....
4 5VKB - AAR C6 H16 N5 O C(C[C@@H](....
5 5V31 - ARG C6 H15 N4 O2 C(C[C@@H](....
6 5V2X - AKG C5 H6 O5 C(CC(=O)O)....
7 5LUN - OGA C4 H5 N O5 C(C(=O)O)N....
8 5V2Y - ARG C6 H15 N4 O2 C(C[C@@H](....
9 5V2Z - ARG C6 H15 N4 O2 C(C[C@@H](....
10 5V34 - ARG C6 H15 N4 O2 C(C[C@@H](....
11 5MOF - AKG C5 H6 O5 C(CC(=O)O)....
50% Homology Family (11)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 5V32 - MLT C4 H6 O5 C([C@H](C(....
2 5VKA - AKG C5 H6 O5 C(CC(=O)O)....
3 5V2T - TLA C4 H6 O6 [C@@H]([C@....
4 5VKB - AAR C6 H16 N5 O C(C[C@@H](....
5 5V31 - ARG C6 H15 N4 O2 C(C[C@@H](....
6 5V2X - AKG C5 H6 O5 C(CC(=O)O)....
7 5LUN - OGA C4 H5 N O5 C(C(=O)O)N....
8 5V2Y - ARG C6 H15 N4 O2 C(C[C@@H](....
9 5V2Z - ARG C6 H15 N4 O2 C(C[C@@H](....
10 5V34 - ARG C6 H15 N4 O2 C(C[C@@H](....
11 5MOF - AKG C5 H6 O5 C(CC(=O)O)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: AKG; Similar ligands found: 6
No: Ligand ECFP6 Tc MDL keys Tc
1 AKG 1 1
2 OOG 0.5 0.947368
3 69O 0.458333 0.714286
4 2IT 0.423077 0.615385
5 SHF 0.416667 0.666667
6 3PY 0.409091 0.652174
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5LUN; Ligand: ARG; Similar sites found: 22
This union binding pocket(no: 1) in the query (biounit: 5lun.bio3) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4DM8 REA 0.01431 0.4136 1.49813
2 3KMR EQN 0.018 0.40353 1.50376
3 5A3T MMK 0.03881 0.40075 1.98864
4 2LBD REA 0.01305 0.41873 2.24719
5 5VFC 9BA 0.0282 0.40684 2.2508
6 4QWT ACD 0.0141 0.41845 2.27273
7 1JQ3 AAT 0.04064 0.40299 2.36486
8 3OPT AKG 0.005877 0.4222 3.125
9 1K7D GRO 0.01996 0.4063 3.34928
10 4ZLU 4PW 0.01584 0.42574 3.40909
11 4ZLU ADP 0.01584 0.42574 3.40909
12 2Q8E OGA 0.009239 0.41284 3.40909
13 2OS2 OGA 0.01231 0.40619 3.40909
14 2YBP 2HG 0.01382 0.40364 3.40909
15 1UWK NAD 0.0316 0.41977 3.69318
16 1UWK URO 0.0316 0.41977 3.69318
17 4CUB GAL NAG 0.0006173 0.47522 3.82514
18 2AMT GPP 0.03217 0.40003 4.40252
19 4X6F 3XU 0.03636 0.41049 4.7619
20 4XJC TTP 0.007881 0.42499 7.34463
21 5MBC FMN 0.01678 0.40126 7.38636
22 3H0A D30 0.02621 0.40595 7.89474
Pocket No.: 2; Query (leader) PDB : 5LUN; Ligand: OGA; Similar sites found: 122
This union binding pocket(no: 2) in the query (biounit: 5lun.bio3) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3W8X FTK 0.01543 0.40323 1.70455
2 4YLL 4E3 0.02796 0.40292 1.70455
3 4Y3O OGA 0.0002678 0.48548 1.98864
4 5A3T MMK 0.00229 0.47019 1.98864
5 4CCK OGA 0.0004768 0.44586 1.98864
6 5FWJ MMK 0.001149 0.44291 1.98864
7 5IVE 6E8 0.005296 0.45085 2.12121
8 2JIG PD2 0.00000001135 0.69806 2.23214
9 2A1X AKG 0.00000181 0.50745 2.27273
10 1ZHX HC3 0.02605 0.40886 2.27273
11 1KGI T4A 0.0143 0.41966 2.3622
12 3SAO NKN 0.005883 0.42639 2.5
13 5K8B PDG 0.0232 0.40715 2.55682
14 5EQU 5R6 0.03146 0.41693 2.62295
15 5EQU AKG 0.01142 0.41607 2.62295
16 5HQ0 LZ9 0.02572 0.40161 2.64901
17 5ML3 DL3 0.01276 0.43736 2.68456
18 1OS7 AKG 0.0008322 0.4015 2.82686
19 1OS7 TAU 0.0008322 0.4015 2.82686
20 4BR5 ANP 0.01738 0.42686 2.84091
21 3TYZ XHP 0.02241 0.40946 2.85714
22 1QY1 PRZ 0.002727 0.45349 2.87356
23 5I0U DCY 0.00006755 0.51711 3
24 2OG7 SIN 0.00003268 0.47852 3.125
25 2RKV COA 0.006347 0.4504 3.125
26 2RKV ZBA 0.007337 0.4504 3.125
27 4TW7 37K 0.03372 0.40292 3.125
28 2XUM OGA 0.00004672 0.48749 3.15186
29 1J3R 6PG 0.00103 0.4589 3.15789
30 3T03 3T0 0.01722 0.40505 3.16901
31 2ZMF CMP 0.01774 0.40818 3.1746
32 2GC0 PAN 0.0004772 0.41691 3.19149
33 5HV0 AKG 0.0000001413 0.65683 3.22581
34 3ML5 AZM 0.002774 0.42277 3.34572
35 5F3I 5UJ 0.01141 0.45323 3.40909
36 2Q8E OGA 0.004499 0.42468 3.40909
37 2Q8C AKG 0.004649 0.42419 3.40909
38 2YBP 2HG 0.004547 0.42401 3.40909
39 2OS2 OGA 0.005273 0.42146 3.40909
40 5LY2 OGA 0.005835 0.41682 3.40909
41 5FWE OGA 0.004555 0.40272 3.40909
42 2P5B OGA 0.01593 0.40254 3.40909
43 4ZXA H8N 0.00561 0.40958 3.57143
44 4OCT AKG 0.0000007991 0.56998 3.6036
45 2IUW AKG 0.0006438 0.4979 3.78151
46 1SGJ OAA 0.004211 0.41592 3.87324
47 4D06 NAR 0.01023 0.42396 3.88693
48 4RFR RHN 0.0000004468 0.6418 3.94089
49 4BQY FNT 0.0000005575 0.50471 3.96825
50 4V24 GYR 0.007607 0.43548 3.97727
51 5TFZ 7BC 0.00213 0.42958 4
52 3HQR OGA 0.000001153 0.55126 4.06504
53 4UF0 MMK 0.00239 0.4435 4.26136
54 4IE6 UN9 0.00001758 0.41091 4.26136
55 1TT8 PHB 0.02299 0.41173 4.26829
56 4M26 SIN 0.002036 0.46693 4.3956
57 4M26 ZZU 0.002036 0.46693 4.3956
58 4M26 AKG 0.0004556 0.4591 4.3956
59 5LJB RTL 0.02598 0.40139 4.44444
60 1N5S ADL 0.0003475 0.43003 4.46429
61 2FCU AKG 0.00001067 0.5344 4.47284
62 1MDC PLM 0.01098 0.42404 4.54545
63 1XPK CAA 0.0192 0.41444 4.54545
64 2HFN FMN 0.01099 0.41691 4.57516
65 4JZR 4JR 0.0000516 0.50106 4.62963
66 1GQG DCD 0.02895 0.40058 4.85714
67 1X0P FAD 0.01111 0.41257 4.8951
68 2XMY CDK 0.005741 0.4758 5.03356
69 5U98 1KX 0.04138 0.41219 5.05051
70 3FW4 CAQ 0.005994 0.44088 5.05618
71 4GJY OGA 0.00002352 0.53857 5.10638
72 4XCB AKG 0.00002877 0.52816 5.36398
73 4XCB HY0 0.000166 0.52378 5.36398
74 3PUR 2HG 0.001677 0.446 5.39773
75 3N9P OGA 0.001293 0.42613 5.39773
76 3N9Q OGA 0.001331 0.42568 5.39773
77 3N9O OGA 0.001485 0.42364 5.39773
78 4DE9 VTP 0.01027 0.43554 5.59441
79 3KV4 OGA 0.002151 0.42855 5.68182
80 3AGC RCC 0.009918 0.43237 5.7971
81 4UEC MGT 0.01417 0.40333 6.52174
82 4BXF AKG 0.00005117 0.51934 6.53409
83 5W4W 9WG 0.04006 0.40388 6.53409
84 2GJ5 VD3 0.02089 0.42569 6.79012
85 3SRV S19 0.01741 0.40277 6.85921
86 3SLS 77D 0.006892 0.42718 6.90789
87 2D6M LBT 0.005095 0.41158 6.91824
88 4QM9 CYS 0.0003994 0.47748 6.93642
89 5JSP DQY 0.004983 0.41156 6.96517
90 2Q8Y GLN TYR PHE MET TPO GLU PTR VAL ALA 0.02296 0.40063 7.05394
91 3AVR OGA 0.0003851 0.47661 7.10227
92 3AVS OGA 0.0005328 0.46998 7.10227
93 2RDQ AKG 0.00002611 0.55705 7.29167
94 4NPL AKG 0.000000159 0.6181 7.6
95 3AJH BL3 0.01777 0.40814 7.66129
96 1MHC FME TYR PHE ILE ASN ILE LEU THR LEU 0.01461 0.42861 8.08081
97 3G08 FEE 0.03512 0.4256 8.08081
98 3QUZ QUV 0.03932 0.42139 8.08081
99 4X5S AZM 0.00356 0.43143 8.18966
100 1REQ DCA 0.0355 0.41849 8.80682
101 1OIJ AKG 0.00002519 0.48389 8.9701
102 4AZP A9M 0.01321 0.42143 9.42029
103 3RGA LSB 0.003092 0.44263 9.89399
104 4ZSI 4R1 0.002798 0.44481 9.94152
105 5C5T AKG 0.0000005396 0.59422 10.0877
106 5T46 MGP 0.01241 0.40395 10.6061
107 4WVW SLT 0.006604 0.41739 11.1111
108 3PDT ADP 0.0169 0.40342 11.2727
109 4P7X YCP 0.00003832 0.54108 11.6438
110 4P7X AKG 0.00003832 0.54108 11.6438
111 5FL5 82E 0.009991 0.41264 13.2296
112 4RLT FSE 0.004569 0.42953 13.6054
113 2AG4 LP3 0.02964 0.4344 15.2439
114 4G7A AZM 0.004703 0.4123 15.3226
115 1GP6 DH2 0.000000105 0.68822 16.1932
116 1GP6 SIN 0.000000105 0.68822 16.1932
117 1GP6 QUE 0.0000001175 0.68822 16.1932
118 5FLJ QUE 0.02617 0.40286 21.5054
119 4QXB OGA 0.001986 0.44207 23.5294
120 1ODM ASV 0.0000554 0.54669 25.6798
121 5C3R AKG 0.00000000308 0.59581 34.1108
122 5C3R HMU 0.00000000308 0.59581 34.1108
Pocket No.: 3; Query (leader) PDB : 5LUN; Ligand: OGA; Similar sites found: 83
This union binding pocket(no: 3) in the query (biounit: 5lun.bio2) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5HES 032 0.0152 0.40815 0.977199
2 3OV6 MK0 0.004442 0.44497 1.70455
3 5GVL PLG 0.04156 0.40467 1.98864
4 5GVL GI8 0.04156 0.40467 1.98864
5 2PNC CLU 0.0162 0.40131 1.98864
6 3A5Y KAA 0.01085 0.41849 2.02899
7 1LSH PLD 0.0007899 0.48132 2.19436
8 3E9I XAH 0.004517 0.44325 2.27273
9 4USF 6UI 0.00584 0.4146 2.30263
10 2HK9 SKM 0.016 0.40093 2.54545
11 2RCU BUJ 0.009546 0.4485 2.55682
12 5FAL COA 0.01676 0.43885 2.55682
13 5FAL SKT 0.01676 0.43885 2.55682
14 1M15 ADP 0.02325 0.41194 2.55682
15 1M15 ARG 0.02325 0.41194 2.55682
16 5UIU 8CG 0.03544 0.40029 2.78638
17 5LRT ADP 0.00286 0.44718 2.84091
18 2I7N ACO 0.008344 0.41928 2.84091
19 3B6R ADP 0.009461 0.4091 2.84091
20 1U6R ADP 0.01258 0.40516 2.84091
21 1UYY BGC BGC 0.00428 0.4033 3.05344
22 4HWT 1B2 0.01311 0.40617 3.125
23 3HXU A5A 0.01772 0.40486 3.125
24 3NKS ACJ 0.01321 0.40216 3.125
25 3RG9 NDP 0.03244 0.40654 3.33333
26 2XCG XCG 0.008451 0.43084 3.40909
27 4OYA 1VE 0.02684 0.42957 3.40909
28 2Y6O 1N1 0.01168 0.41214 3.43643
29 5VC5 96M 0.02344 0.40457 3.46021
30 5W10 CMP 0.003407 0.43447 3.58974
31 1VJY 460 0.02658 0.40672 3.63036
32 4WOE ADP 0.004642 0.42939 3.69318
33 1YFS ALA 0.008591 0.42419 3.69318
34 3A16 PXO 0.004564 0.42281 3.69318
35 3JQ3 ADP 0.008788 0.40384 3.69318
36 5MJA 7O3 0.006175 0.41577 3.93443
37 5JKG 6LF 0.04403 0.40057 4.18006
38 4QJP V1F 0.006778 0.42862 4.18251
39 5CDH TLA 0.00906 0.40536 4.46429
40 1SN0 T44 0.003123 0.41677 4.61538
41 2YKL NLD 0.005127 0.41726 5.09259
42 1DZK PRZ 0.002597 0.40479 5.09554
43 5L2J 70E 0.01826 0.44059 5.10204
44 5L2J 6UL 0.01735 0.44059 5.10204
45 5GZ9 ANP 0.01419 0.40962 5.2459
46 5DEY 59T 0.003942 0.46744 5.38721
47 4BKJ STI 0.01467 0.4187 5.39683
48 2ZKJ ADP 0.03367 0.40859 5.39773
49 1X7D ORN 0.007853 0.44056 5.42857
50 1W62 PYC 0.01568 0.40057 5.55556
51 5KJW 53C 0.0007215 0.42056 5.68182
52 4DHY S41 0.01005 0.42014 5.68182
53 2WKQ FMN 0.01629 0.40159 5.72289
54 2DQU CPD 0.02186 0.40474 5.93607
55 1ERB ETR 0.002321 0.45484 6.01093
56 1FHX 4IP 0.01406 0.40291 6.20155
57 3SXS PP2 0.006555 0.42262 6.71642
58 4BVA T3 0.01394 0.42863 6.86567
59 4DSU BZI 0.000705 0.47562 6.87831
60 4F4P 0SB 0.04158 0.41599 6.95971
61 4R38 RBF 0.01401 0.40656 7.14286
62 2Z77 HE7 0.02874 0.40138 7.19424
63 1GT4 UNA 0.002324 0.40642 7.54717
64 5FUI APY 0.0001735 0.51797 7.57576
65 1QKQ MAN 0.0008698 0.43305 7.74648
66 4TWP AXI 0.006479 0.46395 7.74908
67 1V3S ATP 0.01033 0.41301 7.75862
68 5A89 ADP 0.01177 0.43534 8.33333
69 5A89 FMN 0.01177 0.43534 8.33333
70 5HCY 60D 0.009155 0.44105 8.45921
71 3KRR DQX 0.03067 0.42578 8.47458
72 4F7E 0SH 0.00654 0.44572 8.83392
73 5UKL SIX 0.009102 0.42519 9.375
74 5W71 PLP 0.01232 0.40559 9.375
75 5W71 9YM 0.04402 0.40422 9.375
76 1KTG AMP 0.009211 0.40776 10.1449
77 1HZP DAO 0.00714 0.44574 10.1493
78 2QZ3 XYP XYP XYP 0.002038 0.44916 10.8108
79 3G5D 1N1 0.01351 0.4404 11.5385
80 5TVF CGQ 0.01225 0.40134 12.3077
81 2HK5 1BM 0.01888 0.40023 13.7037
82 2AG4 OLA 0.03715 0.41802 15.2439
83 2GU8 796 0.02307 0.42788 40
Pocket No.: 4; Query (leader) PDB : 5LUN; Ligand: ARG; Similar sites found: 69
This union binding pocket(no: 4) in the query (biounit: 5lun.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5BQS 4VN 0.01288 0.40161 1.85759
2 4Y3O OGA 0.0007969 0.49074 1.98864
3 5FWJ MMK 0.005328 0.44005 1.98864
4 2PNC CLU 0.03675 0.40131 1.98864
5 2JIG PD2 0.0000001654 0.47652 2.23214
6 3ZJX BOG 0.02924 0.40916 2.42215
7 2HK9 SKM 0.02545 0.40885 2.54545
8 1OS7 AKG 0.003465 0.42025 2.82686
9 1OS7 TAU 0.003465 0.42025 2.82686
10 1QY1 PRZ 0.0007469 0.41421 2.87356
11 5XVQ 8GC 0.02468 0.41177 3.16901
12 2GC0 PAN 0.001817 0.44027 3.19149
13 5HV0 AKG 0.000004884 0.45795 3.22581
14 5LY2 OGA 0.009834 0.43396 3.40909
15 2Q8C AKG 0.01683 0.41774 3.40909
16 4ZXA H8N 0.01522 0.41676 3.57143
17 4OCT AKG 0.00001015 0.57037 3.6036
18 4WOE ADP 0.01165 0.42939 3.69318
19 1YFS ALA 0.01925 0.42419 3.69318
20 3A16 PXO 0.0103 0.42281 3.69318
21 3JQ3 ADP 0.01048 0.42071 3.69318
22 4RFR RHN 0.00002143 0.45983 3.94089
23 4BQY FNT 0.00002642 0.51232 3.96825
24 2WBP ZZU 0.00244 0.41996 3.97727
25 2WBP SIN 0.00244 0.41996 3.97727
26 5TFZ 7BC 0.006542 0.4355 4
27 1DRY AAG 0.001555 0.41359 4.01235
28 1DRY AKG 0.001555 0.41359 4.01235
29 3HQR OGA 0.000007673 0.56864 4.06504
30 3MPB FRU 0.01558 0.40459 4.06504
31 4IE6 UN9 0.0003376 0.4336 4.26136
32 2J5B TYE 0.004262 0.44549 4.31034
33 4M26 SIN 0.003414 0.40482 4.3956
34 4M26 ZZU 0.003414 0.40482 4.3956
35 1DMY AZM 0.02411 0.4026 4.43548
36 1N5S ADL 0.002607 0.4372 4.46429
37 1SN0 T44 0.002671 0.44548 4.61538
38 4JZR 4JR 0.0002508 0.50762 4.62963
39 1DZK PRZ 0.00118 0.45779 5.09554
40 5L2J 70E 0.02569 0.40121 5.10204
41 4GJY OGA 0.0001034 0.53908 5.10638
42 1U8X G6P 0.01479 0.41827 5.11364
43 4XCB HY0 0.001173 0.42317 5.36398
44 3PUR 2HG 0.005376 0.44758 5.39773
45 1FHX 4IP 0.03143 0.40454 6.20155
46 5AIG VPR 0.01916 0.41163 6.4
47 4UEC MGT 0.0366 0.40486 6.52174
48 4BXF AKG 0.0002804 0.51355 6.53409
49 4IU6 FZ1 0.02659 0.4094 6.81818
50 4DSU BZI 0.001959 0.47456 6.87831
51 4QM9 CYS 0.001606 0.47489 6.93642
52 3AVR OGA 0.001538 0.47536 7.10227
53 2RDQ AKG 0.0002274 0.43681 7.29167
54 1GT4 UNA 0.009035 0.41215 7.54717
55 5FUI APY 0.0004455 0.50746 7.57576
56 4NPL AKG 0.000001206 0.43517 7.6
57 1QKQ MAN 0.001998 0.43305 7.74648
58 4TWP AXI 0.01928 0.40559 7.74908
59 4FFG 0U8 0.02956 0.40596 7.95455
60 5C5T AKG 0.000003712 0.6007 10.0877
61 1KTG AMP 0.01927 0.40965 10.1449
62 4P7X YCP 0.0004595 0.40991 11.6438
63 4P7X AKG 0.0004595 0.40991 11.6438
64 1GP6 QUE 0.000008349 0.50801 16.1932
65 1GP6 SIN 0.000009653 0.49996 16.1932
66 1GP6 DH2 0.000009653 0.49996 16.1932
67 1ODM ASV 0.0002768 0.44418 25.6798
68 5C3R AKG 0.0000001127 0.6309 34.1108
69 5C3R HMU 0.0000001127 0.6309 34.1108
Pocket No.: 5; Query (leader) PDB : 5LUN; Ligand: ARG; Similar sites found: 5
This union binding pocket(no: 5) in the query (biounit: 5lun.bio4) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3NYQ MCA 0.03295 0.40675 1.70455
2 3OV6 MK0 0.03855 0.4009 1.70455
3 2R40 20E 0.02832 0.4015 3.04183
4 4LIX AG8 0.02545 0.40093 6.53409
5 1JW0 GUA 0.004873 0.41369 6.96203
Pocket No.: 6; Query (leader) PDB : 5LUN; Ligand: OGA; Similar sites found: 13
This union binding pocket(no: 6) in the query (biounit: 5lun.bio4) has 15 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4IJP 1EH 0.02381 0.40335 1.70455
2 3H78 BE2 0.04463 0.40017 1.70455
3 3ZXE PGZ 0.003648 0.40714 2.25564
4 1YIQ PQQ 0.02816 0.4012 2.27273
5 2IXC TRH 0.02837 0.40104 2.47525
6 5DXI TRE 0.004991 0.43428 2.98013
7 5EW9 5VC 0.01949 0.46069 3.32103
8 4JH6 FCN 0.01398 0.40057 3.62319
9 1PZL MYR 0.02002 0.40366 3.79747
10 4GGZ BTN 0.01721 0.40087 4.34783
11 4Y24 TD2 0.01584 0.40035 4.54545
12 5MBC FMN 0.02132 0.40035 7.38636
13 1R5L VIV 0.03563 0.40029 7.63359
Pocket No.: 7; Query (leader) PDB : 5LUN; Ligand: OGA; Similar sites found: 19
This union binding pocket(no: 7) in the query (biounit: 5lun.bio1) has 29 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5BQS 4VN 0.0114 0.40403 1.85759
2 3T5M AMP 0.02426 0.41108 2.08333
3 3G3N TC8 0.02918 0.40636 2.51572
4 3OPT AKG 0.01357 0.42584 3.125
5 5XVQ 8GC 0.03028 0.40582 3.16901
6 2WBP SIN 0.003424 0.4138 3.97727
7 2WBP ZZU 0.003424 0.4138 3.97727
8 1DRY AKG 0.002202 0.40776 4.01235
9 1DRY AAG 0.002202 0.40776 4.01235
10 3MPB FRU 0.0114 0.41105 4.06504
11 2WDA L42 0.02102 0.41906 4.26136
12 2J5B TYE 0.00546 0.43842 4.31034
13 5DG2 GAL GLC 0.01413 0.42094 4.44444
14 2YMZ LAT 0.01463 0.42578 4.61538
15 5GM5 CBI 0.008789 0.40583 6.36364
16 5AIG VPR 0.007106 0.43367 6.4
17 4KBA 1QM 0.005968 0.43753 6.53409
18 1TV5 N8E 0.03757 0.40341 7.38636
19 1TW4 CHD 0.006487 0.42677 8.8
Pocket No.: 8; Query (leader) PDB : 5LUN; Ligand: ARG; Similar sites found: 13
This union binding pocket(no: 8) in the query (biounit: 5lun.bio1) has 29 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3T5M AMP 0.02426 0.41108 2.08333
2 3G3N TC8 0.02918 0.40636 2.51572
3 5EW9 5VC 0.01261 0.42883 3.32103
4 2WDA L42 0.02102 0.41906 4.26136
5 5DG2 GAL GLC 0.01413 0.42094 4.44444
6 2YMZ LAT 0.01463 0.42578 4.61538
7 2XMY CDK 0.02447 0.40036 5.03356
8 5L2J 6UL 0.01975 0.40512 5.10204
9 5GM5 CBI 0.008789 0.40583 6.36364
10 4KBA 1QM 0.005968 0.43753 6.53409
11 1TV5 N8E 0.03757 0.40341 7.38636
12 1TW4 CHD 0.006487 0.42677 8.8
13 5TVF CGQ 0.03031 0.40136 12.3077
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