Receptor
PDB id Resolution Class Description Source Keywords
5MTU 1 Å NON-ENZYME: OTHER MALTODEXTRIN BINDING PROTEIN MALE1 FROM L. CASEI BL23 BOUND CYCLODEXTRIN LACTOBACILLUS CASEI BL23 CARBOHYDRATE BINDING PROTEIN LACTOBACILLUS CASEI SUGAR BINPROTEIN
Ref.: INDUCER EXCLUSION IN FIRMICUTES: INSIGHTS INTO THE REGULATION OF A CARBOHYDRATE ATP BINDING CASSETTE TRANSPORTER FROM LACTOBACILLUS CASEI BL23 BY THE SI TRANSDUCING PROTEIN P-SER46-HPR. MOL. MICROBIOL. V. 105 25 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GLC GLC GLC GLC GLC GLC B:1;
 Valid;
 none;
 Kd = 136 uM
972.846 n/a OCC1O...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5MTT 1.12 Å NON-ENZYME: OTHER MALTODEXTRIN BINDING PROTEIN MALE1 FROM L. CASEI BL23 BOUND MALTOTETRAOSE LACTOBACILLUS CASEI BL23 CARBOHYDRATE BINDING PROTEIN LACTOBACILLUS CASEI SUGAR BINPROTEIN
Ref.: INDUCER EXCLUSION IN FIRMICUTES: INSIGHTS INTO THE REGULATION OF A CARBOHYDRATE ATP BINDING CASSETTE TRANSPORTER FROM LACTOBACILLUS CASEI BL23 BY THE SI TRANSDUCING PROTEIN P-SER46-HPR. MOL. MICROBIOL. V. 105 25 2017
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 5MTT Kd = 27 uM GLC GLC GLC GLC n/a n/a
2 5MKA Kd = 49 uM GLC GLC GLC GLC GLC GLC GLC GLC n/a n/a
3 5MK9 Kd = 38 uM GLC GLC GLC GLC GLC GLC GLC n/a n/a
4 5M28 Kd = 48 uM GLC GLC GLC n/a n/a
5 5MTU Kd = 136 uM GLC GLC GLC GLC GLC GLC n/a n/a
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 5MTT Kd = 27 uM GLC GLC GLC GLC n/a n/a
2 5MKA Kd = 49 uM GLC GLC GLC GLC GLC GLC GLC GLC n/a n/a
3 5MK9 Kd = 38 uM GLC GLC GLC GLC GLC GLC GLC n/a n/a
4 5M28 Kd = 48 uM GLC GLC GLC n/a n/a
5 5MTU Kd = 136 uM GLC GLC GLC GLC GLC GLC n/a n/a
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 5MTT Kd = 27 uM GLC GLC GLC GLC n/a n/a
2 5MKA Kd = 49 uM GLC GLC GLC GLC GLC GLC GLC GLC n/a n/a
3 5MK9 Kd = 38 uM GLC GLC GLC GLC GLC GLC GLC n/a n/a
4 5M28 Kd = 48 uM GLC GLC GLC n/a n/a
5 5MTU Kd = 136 uM GLC GLC GLC GLC GLC GLC n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GLC GLC GLC GLC GLC GLC; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 GLC GLC GLC GLC GLC GLC GLC 1 1
2 GLC GLC GLC GLC GLC GLC 1 1
3 GLC GLC GLC GLC GLC GLC GLC GLC 1 1
4 GLC GLC GLC GLC 0.510638 0.939394
Similar Ligands (3D)
Ligand no: 1; Ligand: GLC GLC GLC GLC GLC GLC; Similar ligands found: 4
No: Ligand Similarity coefficient
1 BGC BGC BGC BGC BGC BGC 0.9686
2 GLC AC1 GLC AC1 0.9208
3 BGC AC1 GLC AC1 0.9117
4 BGC G6D GLC ACI GLD ACI 0.8960
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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