Receptor
PDB id Resolution Class Description Source Keywords
5NBW 2.4 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE FAB FRAGMENT 22F12 IN COMPLEX WITH HYDROXYBENZO[A]PYRENE MUS MUSCULUS ANTIBODY BENZO[A]PYRENE FAB FRAGMENT HAPTEN IMMUNE SYSTE
Ref.: TIGHT MOLECULAR RECOGNITION OF BENZO[A]PYRENE BY A HIGH-AFFINITY ANTIBODY. ANGEW. CHEM. INT. ED. ENGL. V. 56 10592 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
8SK A:301;
L:301;
Valid;
Valid;
none;
none;
submit data
268.309 C20 H12 O c1ccc...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5NBW 2.4 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF THE FAB FRAGMENT 22F12 IN COMPLEX WITH HYDROXYBENZO[A]PYRENE MUS MUSCULUS ANTIBODY BENZO[A]PYRENE FAB FRAGMENT HAPTEN IMMUNE SYSTE
Ref.: TIGHT MOLECULAR RECOGNITION OF BENZO[A]PYRENE BY A HIGH-AFFINITY ANTIBODY. ANGEW. CHEM. INT. ED. ENGL. V. 56 10592 2017
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 5NBW - 8SK C20 H12 O c1ccc2c(c1....
70% Homology Family (189)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 65 families.
1 3HNV - AXR BXY BXY BXX n/a n/a
2 3HNS - AXR BXY BXY BXY BXX BXX n/a n/a
3 3IF1 - NGA C8 H15 N O6 CC(=O)N[C@....
4 3IET Kd = 0.14 uM GLY THR LYS PRO PRO LEU GLU GLU LEU A2G n/a n/a
5 2HRP - MET SER LEU PRO GLY ARG TRP LYS PRO LYS n/a n/a
6 5NBW - 8SK C20 H12 O c1ccc2c(c1....
7 4OJF - ASP ALA GLU PHE ARG HIS ASP SER n/a n/a
8 5D6C - 57S C13 H26 N O13 P CC(=O)N[C@....
9 1WC7 - PP3 C11 H17 N2 O7 P Cc1c(c(c(c....
10 1WCB Kd = 26 nM PE1 C14 H24 N3 O7 P Cc1c(c(c(c....
11 3I9G Kd = 1.1 nM S1P C18 H38 N O5 P CCCCCCCCCC....
12 1AJ7 Kd = 135 uM NPE C11 H13 N O7 P c1cc(ccc1[....
13 1GAF Kd = 10 nM NPE C11 H13 N O7 P c1cc(ccc1[....
14 4JN2 - C24 C27 H29 N7 O3 CCOC(=O)CC....
15 1U8M - GLU LEU ASP LYS TYR ALA SER n/a n/a
16 3IDG - ALA LEU ASP LYS TRP ASP n/a n/a
17 1TJG - GLU LEU ASP LYS TRP ALA SER n/a n/a
18 1U93 - GLU GLN ASP LYS TRP ALA SER n/a n/a
19 1U8H - ALA LEU ASP LYS TRP ALA SER n/a n/a
20 1U8Q - GLU LEU GLU LYS TRP ALA SER n/a n/a
21 3IDJ - GLU LEU ASP ORN TRP ALA SER n/a n/a
22 2F5B - GLU LEU ASP LYS TRP ALA SER n/a n/a
23 1U92 - GLU ALA ASP LYS TRP GLN SER n/a n/a
24 1U8I - GLU LEU ASP LYS TRP ALA ASN n/a n/a
25 1U95 - GLU LEU ASP HIS TRP ALA SER n/a n/a
26 1U8J - GLU LEU ASP LYS TRP ALA GLY n/a n/a
27 3IDI - ALA LEU ASP LYS TRP GLN ASN n/a n/a
28 3IDN - GLU LEU ASP HOX TRP ALA SER n/a n/a
29 1U91 - GLU ASN ASP LYS TRP ALA SER n/a n/a
30 3IDM - GLU LEU ASP NRG TRP ALA SER n/a n/a
31 1U8K - LEU GLU LEU ASP LYS TRP ALA SER LEU n/a n/a
32 2C1P - FNZ C18 H15 F N4 O c1cc(ccc1C....
33 2R2E - KDE C11 H18 O8 C=CCO[C@@]....
34 3SY0 - KDA KDO KDO n/a n/a
35 3OKL - KDA KDO n/a n/a
36 2R1Y Kd = 31 uM KDR KDO n/a n/a
37 2R2B - KDA KDO KDO n/a n/a
38 2G5B - PRO THR SER SER GLU GLN ILE n/a n/a
39 2R1X Kd = 16 uM KDD KDA n/a n/a
40 3OKK - KDA KDO n/a n/a
41 3OKE - KO2 C11 H18 O9 C=CCO[C@@]....
42 3OKN - KDO KDO KDA n/a n/a
43 3HZM Kd = 0.00000145 M KDO C8 H14 O8 C1[C@H]([C....
44 2R23 Kd = 190 uM KO1 KDA n/a n/a
45 1Q9W - KDO KDO KDO n/a n/a
46 3T65 - KDA KDO n/a n/a
47 2R1W Kd = 25 uM KDB KDA n/a n/a
48 3OKO - KDA KDO KDO n/a n/a
49 3HZV - KDA KDO KDO n/a n/a
50 3T4Y - KDO C8 H14 O8 C1[C@H]([C....
51 3OKD - KDO C8 H14 O8 C1[C@H]([C....
52 3T77 - KDA KDO n/a n/a
53 3HZY Kd = 10 uM KDA KDO KDO n/a n/a
54 2R2H - KO2 C11 H18 O9 C=CCO[C@@]....
55 3BPC Kd = 16 uM KDB KDA n/a n/a
56 4HGW Kd = 0.00000145 M KTU KDO n/a n/a
57 1Y0L Kd ~ 1 nM HAN C14 H19 N3 O2 Cc1cc2c(cc....
58 1E4W Kd = 25 nM SER HIS PHE ASN GLU TYR GLU n/a n/a
59 3V52 - GLU PRO GLN ALA PRO TRP MET GLU n/a n/a
60 3UYR - GLU PRO GLN ALA PRO TRP MET GLU n/a n/a
61 3V4U - GLU PRO GLN ALA PRO TRP MET GLU GLN n/a n/a
62 3UO1 - GLU PRO GLN ALA PRO TRP MET GLU GLN n/a n/a
63 1F3D - TPM C12 H18 N3 c1cc(ccc1C....
64 2OK0 Kd = 0.2 nM DT DC n/a n/a
65 1MRF - DI C10 H13 N4 O7 P c1nc2c(n1[....
66 1MRD - IDP C10 H14 N4 O11 P2 c1nc2c(n1[....
67 1MRE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
68 5MY4 - PCA PHE ARG HIS ASP SER GLY TYR GLU VAL n/a n/a
69 3FO0 - BZH C12 H14 N4 O3 c1cc2c(cc1....
70 3FO2 - BZH C12 H14 N4 O3 c1cc2c(cc1....
71 3FO1 - BZH C12 H14 N4 O3 c1cc2c(cc1....
72 1ZLS - MAN MAN MAN MAN n/a n/a
73 3OAU - MAN MAN n/a n/a
74 1OP3 - MAN C6 H12 O6 C([C@@H]1[....
75 3OAZ - 2M5 C8 H16 O6 C[C@@H]([C....
76 4RBP - KDO MAN MAN MAN MAN MAN n/a n/a
77 3OAY - BDF C6 H12 O6 C1[C@H]([C....
78 5MYO - PCA PHE ARG HIS ASP SER GLY TYR GLU VAL n/a n/a
79 1QYG - BCG C16 H19 N O4 C[N@]1[C@H....
80 1RIV - OBE C16 H19 N O5 C[N@H+]1[C....
81 1Q72 Kd = 0.00000145 M COC C17 H21 N O4 C[N@]1[C@H....
82 1RIU - RBE C15 H17 N O4 c1ccc(cc1)....
83 3FN0 Kd ~ 40 uM TRP ASN TRP PHE ASP ILE THR ASN LYS n/a n/a
84 1S3K Kd = 0.24 uM FUC GAL NDG FUC n/a n/a
85 3EYV - FUC GAL NDG FUC n/a n/a
86 5I8C - ALA VAL GLY ILE GLY ALA VAL PHE LEU n/a n/a
87 2AJX - TGN C16 H22 N O5 P C[N@]1[C@H....
88 2AJZ - ECG C10 H17 N O3 C[N@]1[C@H....
89 2AK1 - BEZ C7 H6 O2 c1ccc(cc1)....
90 2AJV - COC C17 H21 N O4 C[N@]1[C@H....
91 2AJY - ECG C10 H17 N O3 C[N@]1[C@H....
92 5VH4 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
93 1A4K Kd = 0.01 uM FRA C21 H23 N3 O7 CC(=O)Nc1c....
94 3IJH Kd = 100 uM KO2 C11 H18 O9 C=CCO[C@@]....
95 1YEE - PNB C13 H17 N2 O8 P c1cc(ccc1C....
96 1KN4 - PDE C13 H17 N2 O8 P C[C@@H](C(....
97 1YEG - BPN C7 H7 N O3 c1cc(ccc1C....
98 1YEK - NPO C6 H5 N O3 c1cc(ccc1[....
99 1YEI Kd = 35 nM PGG C12 H15 N2 O8 P c1cc(ccc1[....
100 1YEJ Kd = 35 nM PNF C16 H23 N2 O8 P c1cc(ccc1[....
101 1YEF - PNC C14 H17 N3 O6 c1cc(ccc1C....
102 1KN2 - PNE C13 H17 N2 O8 P CC(C(=O)O)....
103 4OCX Kd = 3.6 pM MT1 C20 H23 N8 O5 CN(Cc1cnc2....
104 4S1D - 41M C16 H29 N5 O3 S C1[C@H]2[C....
105 1FLR Kd = 0.1 nM FLU C20 H12 O5 c1ccc(c(c1....
106 5JOP - GAL BGC NAG GAL n/a n/a
107 3QCU - NKN C17 H35 O7 P CCCCCCCCCC....
108 4ONF - ASP ALA GLU PHE ARG HIS ASP n/a n/a
109 1KEL Kd = 52 nM AAH C13 H19 N2 O7 P c1cc(ccc1C....
110 1JGU - HBC C20 H21 N O c1ccc(cc1)....
111 2DDQ - HRB C17 H27 N3 O5 CCCCC[C@@H....
112 2DQU Ki = 50 nM CPD C28 H36 Cl2 F3 N6 O8 P CCNC(=O)N(....
113 2DQT Ki = 50 nM CPD C28 H36 Cl2 F3 N6 O8 P CCNC(=O)N(....
114 1JGL Kd = 2 nM EST C18 H24 O2 C[C@]12CC[....
115 1A0Q Ki = 27 nM HEP C15 H22 N O6 P CCCC[C@H](....
116 2Z93 Kd = 11.1 nM END C17 H24 O7 C1C=CCO[C@....
117 2Z92 Kd = 66.7 nM ENE C22 H30 O8 C1C=CCO[C@....
118 2R0W - ASP ALA GLU PHE ARG HIS ASP SER n/a n/a
119 5EOQ - LYS ARG GLU ALA ILE VAL LYS ALA ASP GLU n/a n/a
120 3EYS Kd = 3000 nM PCA PHE ARG HIS ASP SER n/a n/a
121 2IPU - ASP ALA GLU PHE ARG HIS ASP SER n/a n/a
122 2R0Z Kd = 3400 nM ALA LYS PHE ARG HIS ASP n/a n/a
123 4YHY - M3L C9 H21 N2 O2 C[N+](C)(C....
124 2V17 - THR ASP HIS GLY ALA GLU n/a n/a
125 1EAP - HEP C15 H22 N O6 P CCCC[C@H](....
126 5T78 Kd = 43 nM NGA ALA PRO ASP THR ARG PRO ALA PRO n/a n/a
127 5T6P Kd = 880 nM ALA PRO ASP THR ARG PRO ALA PRO n/a n/a
128 4TUO - SIA GAL SIA GLC NGA n/a n/a
129 2HKF - LEU PRO GLY GLU GLU ASP LEU PRO GLY n/a n/a
130 1LO3 - AN1 C18 H16 O2 Cc1c2ccccc....
131 1LO0 - BC1 C19 H17 N3 O3 CN1c2ccccc....
132 1LO2 - OX1 C18 H16 O4 CC12c3cccc....
133 3BZ4 - EAG RAM RAM GLC RAM NAG RAM RAM GLC RAM n/a n/a
134 3C6S - RAM RAM RAM GLC NAG RAM RAM RAM GLC NAG RAM n/a n/a
135 1M7D Ka = 1700000 M^-1 RAM RAE MAG n/a n/a
136 1M7I Ka = 250000 M^-1 RAM RAM RAM NAG RAO n/a n/a
137 1PZ5 Kd = 4 uM MET ASP TRP ASN MET HIS ALA ALA n/a n/a
138 1XF2 - DT DT DT n/a n/a
139 5ALC - TIQ C23 H28 F2 N6 O4 S CCCSc1nc(c....
140 4ODV - GP1 Z9M n/a n/a
141 1KEG - DT 64T DT DT n/a n/a
142 1EHL - 5HT DT n/a n/a
143 1C1E - ENH C10 H5 Cl6 N O2 CN1C(=O)[C....
144 1CLY - FUC GAL NAG NON FUC n/a n/a
145 1CT8 Kd = 0.3 uM TAA C20 H21 Cl2 F3 N3 O8 P c1cc(ccc1C....
146 1CE1 - GLY THR SER SER PRO SER ALA ASP n/a n/a
147 1T66 - FLU C20 H12 O5 c1ccc(c(c1....
148 3GHB - LYS GLY VAL ARG ILE GLY PRO GLY GLN ALA n/a n/a
149 2W65 - ALA CIR GLY LEU THR GLY ARG HYP GLY n/a n/a
150 5DYO - FLU C20 H12 O5 c1ccc(c(c1....
151 4UIN Kd = 24 nM QI9 C20 H24 N2 O2 COc1ccc2c(....
152 3V0W Kd = 32 nM PA1 GLC GLC GLC GM0 GLA GM0 GMH KDO KDO n/a n/a
153 3IFL - ASP ALA GLU PHE ARG HIS ASP n/a n/a
154 3IFO - ASP ALA GLU PHE ARG HIS ASP n/a n/a
155 2CGR Kd = 53 nM GAS C23 H20 N4 O2 c1ccc(cc1)....
156 1YNK - SC5 C18 H26 N4 O2 C[C@H](c1c....
157 1I7Z Kd = 0.4 uM COC C17 H21 N O4 C[N@]1[C@H....
158 2O5Z Kd = 110 mM ANO C19 H28 O2 C[C@]12CCC....
159 25C8 - GEP C19 H29 N2 O3 C[N+]1(CCC....
160 35C8 - NOX C18 H26 N2 O4 c1cc(ccc1C....
161 1FL3 Kd = 0.16 uM SPB C19 H19 N O3 c1ccc(cc1)....
162 3CFB - SPB C19 H19 N O3 c1ccc(cc1)....
163 1UB5 - SPB C19 H19 N O3 c1ccc(cc1)....
164 1ZEA Kd = 6 uM DVA DPR GLY DSN DGN DHI DTY DAS DSN n/a n/a
165 1MEX - RAC C18 H18 N2 O5 CN(C)C(=O)....
166 1UM5 - SS1 C8 H10 O C[C@@H](c1....
167 1UM4 - SH4 C17 H19 N O4 P C[C@@H](c1....
168 1VPO Kd = 0.00000145 M TES C19 H28 O2 C[C@]12CC[....
169 1C5C Kd = 110 nM TK4 C12 H11 N O7 S2 CC(=O)Nc1c....
170 2PCP Kd = 2 nM 1PC C17 H25 N c1ccc(cc1)....
171 1D6V Kd = 670 nM HOP C23 H27 N O4 c1ccc(cc1)....
172 4YHK ic50 = 4.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
173 4YHM ic50 = 4.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
174 4YHO ic50 = 2.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
175 4YHI ic50 = 4.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
176 3O6M Kd = 33 nM PRO LYS LEU GLU PRO TRP LYS HIS PRO n/a n/a
177 1IGJ Kd = 0.1 nM DGX C41 H64 O14 C[C@@H]1[C....
178 1UZ8 Kd = 10.75 uM MAG FUC GAL n/a n/a
179 4ODT - GP1 Z9M n/a n/a
180 1RUM - BEZ C7 H6 O2 c1ccc(cc1)....
181 1ND0 - DP4 C14 H23 N O Si C[N+]1(CCC....
182 3LEY - LEU LEU GLU LEU ASP LYS TRP ALA NH2 n/a n/a
183 1RUP - BEZ C7 H6 O2 c1ccc(cc1)....
184 1RU9 - BEZ C7 H6 O2 c1ccc(cc1)....
185 1RUL - BEZ C7 H6 O2 c1ccc(cc1)....
186 3LEX Kd = 6.44 nM LEU LEU GLU LEU ASP LYS TRP ALA NH2 n/a n/a
187 1RUK - BEZ C7 H6 O2 c1ccc(cc1)....
188 1NCW - BEZ C7 H6 O2 c1ccc(cc1)....
189 1RUA - BEZ C7 H6 O2 c1ccc(cc1)....
50% Homology Family (220)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 43 families.
1 3HNT - AXR BXY BXY BXX n/a n/a
2 3HNV - AXR BXY BXY BXX n/a n/a
3 3HNS - AXR BXY BXY BXY BXX BXX n/a n/a
4 3QG6 ic50 = 0.73 nM TYR SER THR CYS TYR PHE ILE MET n/a n/a
5 3IF1 - NGA C8 H15 N O6 CC(=O)N[C@....
6 3IET Kd = 0.14 uM GLY THR LYS PRO PRO LEU GLU GLU LEU A2G n/a n/a
7 3PHQ - KDO C8 H14 O8 C1[C@H]([C....
8 2HRP - MET SER LEU PRO GLY ARG TRP LYS PRO LYS n/a n/a
9 5NBW - 8SK C20 H12 O c1ccc2c(c1....
10 4OJF - ASP ALA GLU PHE ARG HIS ASP SER n/a n/a
11 4M7J Kd = 0.781 uM KDA KDO KDO n/a n/a
12 5D6C - 57S C13 H26 N O13 P CC(=O)N[C@....
13 2BMK Kd = 2.4 uM PDD C11 H17 N2 O7 P Cc1c(c(c(c....
14 1WC7 - PP3 C11 H17 N2 O7 P Cc1c(c(c(c....
15 1WCB Kd = 26 nM PE1 C14 H24 N3 O7 P Cc1c(c(c(c....
16 1MJ7 Kd = 4.5 nM HAL C23 H29 N2 O7 P c1ccc(cc1)....
17 1MH5 Kd = 0.61 nM HAL C23 H29 N2 O7 P c1ccc(cc1)....
18 3I9G Kd = 1.1 nM S1P C18 H38 N O5 P CCCCCCCCCC....
19 1F4X Kd = 2.6 uM MGS C12 H23 N O7 C[C@@H]1[C....
20 1AJ7 Kd = 135 uM NPE C11 H13 N O7 P c1cc(ccc1[....
21 1GAF Kd = 10 nM NPE C11 H13 N O7 P c1cc(ccc1[....
22 3CFD - SPB C19 H19 N O3 c1ccc(cc1)....
23 4JN2 - C24 C27 H29 N7 O3 CCOC(=O)CC....
24 1U8M - GLU LEU ASP LYS TYR ALA SER n/a n/a
25 3IDG - ALA LEU ASP LYS TRP ASP n/a n/a
26 1TJG - GLU LEU ASP LYS TRP ALA SER n/a n/a
27 1U93 - GLU GLN ASP LYS TRP ALA SER n/a n/a
28 1U8H - ALA LEU ASP LYS TRP ALA SER n/a n/a
29 1U8Q - GLU LEU GLU LYS TRP ALA SER n/a n/a
30 3IDJ - GLU LEU ASP ORN TRP ALA SER n/a n/a
31 2F5B - GLU LEU ASP LYS TRP ALA SER n/a n/a
32 1U92 - GLU ALA ASP LYS TRP GLN SER n/a n/a
33 1U8I - GLU LEU ASP LYS TRP ALA ASN n/a n/a
34 1U95 - GLU LEU ASP HIS TRP ALA SER n/a n/a
35 1U8J - GLU LEU ASP LYS TRP ALA GLY n/a n/a
36 3IDI - ALA LEU ASP LYS TRP GLN ASN n/a n/a
37 3IDN - GLU LEU ASP HOX TRP ALA SER n/a n/a
38 1U91 - GLU ASN ASP LYS TRP ALA SER n/a n/a
39 3IDM - GLU LEU ASP NRG TRP ALA SER n/a n/a
40 1U8K - LEU GLU LEU ASP LYS TRP ALA SER LEU n/a n/a
41 2C1P - FNZ C18 H15 F N4 O c1cc(ccc1C....
42 2R2E - KDE C11 H18 O8 C=CCO[C@@]....
43 3SY0 - KDA KDO KDO n/a n/a
44 3OKL - KDA KDO n/a n/a
45 2R1Y Kd = 31 uM KDR KDO n/a n/a
46 2R2B - KDA KDO KDO n/a n/a
47 2G5B - PRO THR SER SER GLU GLN ILE n/a n/a
48 2R1X Kd = 16 uM KDD KDA n/a n/a
49 3OKK - KDA KDO n/a n/a
50 3OKE - KO2 C11 H18 O9 C=CCO[C@@]....
51 3OKN - KDO KDO KDA n/a n/a
52 3HZM Kd = 0.00000145 M KDO C8 H14 O8 C1[C@H]([C....
53 2R23 Kd = 190 uM KO1 KDA n/a n/a
54 1Q9W - KDO KDO KDO n/a n/a
55 3T65 - KDA KDO n/a n/a
56 2R1W Kd = 25 uM KDB KDA n/a n/a
57 3OKO - KDA KDO KDO n/a n/a
58 3HZV - KDA KDO KDO n/a n/a
59 3T4Y - KDO C8 H14 O8 C1[C@H]([C....
60 3OKD - KDO C8 H14 O8 C1[C@H]([C....
61 3T77 - KDA KDO n/a n/a
62 3HZY Kd = 10 uM KDA KDO KDO n/a n/a
63 3HZK Kd = 30 uM KDA KDO n/a n/a
64 2R2H - KO2 C11 H18 O9 C=CCO[C@@]....
65 3BPC Kd = 16 uM KDB KDA n/a n/a
66 4HGW Kd = 0.00000145 M KTU KDO n/a n/a
67 1Y0L Kd ~ 1 nM HAN C14 H19 N3 O2 Cc1cc2c(cc....
68 1E4W Kd = 25 nM SER HIS PHE ASN GLU TYR GLU n/a n/a
69 3V52 - GLU PRO GLN ALA PRO TRP MET GLU n/a n/a
70 3UYR - GLU PRO GLN ALA PRO TRP MET GLU n/a n/a
71 3V4U - GLU PRO GLN ALA PRO TRP MET GLU GLN n/a n/a
72 3UO1 - GLU PRO GLN ALA PRO TRP MET GLU GLN n/a n/a
73 1F3D - TPM C12 H18 N3 c1cc(ccc1C....
74 2OK0 Kd = 0.2 nM DT DC n/a n/a
75 1MRF - DI C10 H13 N4 O7 P c1nc2c(n1[....
76 1MRD - IDP C10 H14 N4 O11 P2 c1nc2c(n1[....
77 1MRE - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
78 5MY4 - PCA PHE ARG HIS ASP SER GLY TYR GLU VAL n/a n/a
79 3FO0 - BZH C12 H14 N4 O3 c1cc2c(cc1....
80 3FO2 - BZH C12 H14 N4 O3 c1cc2c(cc1....
81 3FO1 - BZH C12 H14 N4 O3 c1cc2c(cc1....
82 1ZLS - MAN MAN MAN MAN n/a n/a
83 3OAU - MAN MAN n/a n/a
84 1OP3 - MAN C6 H12 O6 C([C@@H]1[....
85 3OAZ - 2M5 C8 H16 O6 C[C@@H]([C....
86 4RBP - KDO MAN MAN MAN MAN MAN n/a n/a
87 3OAY - BDF C6 H12 O6 C1[C@H]([C....
88 5DTF - 5CT C10 H23 N3 O3 C(CCNC[C@H....
89 5MYO - PCA PHE ARG HIS ASP SER GLY TYR GLU VAL n/a n/a
90 1QYG - BCG C16 H19 N O4 C[N@]1[C@H....
91 1RIV - OBE C16 H19 N O5 C[N@H+]1[C....
92 1Q72 Kd = 0.00000145 M COC C17 H21 N O4 C[N@]1[C@H....
93 1RIU - RBE C15 H17 N O4 c1ccc(cc1)....
94 3FN0 Kd ~ 40 uM TRP ASN TRP PHE ASP ILE THR ASN LYS n/a n/a
95 1S3K Kd = 0.24 uM FUC GAL NDG FUC n/a n/a
96 3EYV - FUC GAL NDG FUC n/a n/a
97 5I8C - ALA VAL GLY ILE GLY ALA VAL PHE LEU n/a n/a
98 2AJX - TGN C16 H22 N O5 P C[N@]1[C@H....
99 2AJZ - ECG C10 H17 N O3 C[N@]1[C@H....
100 2AK1 - BEZ C7 H6 O2 c1ccc(cc1)....
101 2AJV - COC C17 H21 N O4 C[N@]1[C@H....
102 2AJY - ECG C10 H17 N O3 C[N@]1[C@H....
103 5VH4 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
104 1A4K Kd = 0.01 uM FRA C21 H23 N3 O7 CC(=O)Nc1c....
105 3IJH Kd = 100 uM KO2 C11 H18 O9 C=CCO[C@@]....
106 1YEE - PNB C13 H17 N2 O8 P c1cc(ccc1C....
107 1KN4 - PDE C13 H17 N2 O8 P C[C@@H](C(....
108 1YEG - BPN C7 H7 N O3 c1cc(ccc1C....
109 1YEK - NPO C6 H5 N O3 c1cc(ccc1[....
110 1YEI Kd = 35 nM PGG C12 H15 N2 O8 P c1cc(ccc1[....
111 1YEC - PNB C13 H17 N2 O8 P c1cc(ccc1C....
112 1YEJ Kd = 35 nM PNF C16 H23 N2 O8 P c1cc(ccc1[....
113 1YEF - PNC C14 H17 N3 O6 c1cc(ccc1C....
114 1KN2 - PNE C13 H17 N2 O8 P CC(C(=O)O)....
115 4OCX Kd = 3.6 pM MT1 C20 H23 N8 O5 CN(Cc1cnc2....
116 4S1D - 41M C16 H29 N5 O3 S C1[C@H]2[C....
117 1FLR Kd = 0.1 nM FLU C20 H12 O5 c1ccc(c(c1....
118 5EOR - ASP VAL GLN THR GLY ARG ARG PRO TYR GLU n/a n/a
119 5JOP - GAL BGC NAG GAL n/a n/a
120 3QCU - NKN C17 H35 O7 P CCCCCCCCCC....
121 4ONF - ASP ALA GLU PHE ARG HIS ASP n/a n/a
122 1KEL Kd = 52 nM AAH C13 H19 N2 O7 P c1cc(ccc1C....
123 1JGU - HBC C20 H21 N O c1ccc(cc1)....
124 2DDQ - HRB C17 H27 N3 O5 CCCCC[C@@H....
125 2DQU Ki = 50 nM CPD C28 H36 Cl2 F3 N6 O8 P CCNC(=O)N(....
126 2DQT Ki = 50 nM CPD C28 H36 Cl2 F3 N6 O8 P CCNC(=O)N(....
127 1JGL Kd = 2 nM EST C18 H24 O2 C[C@]12CC[....
128 3T0W - DIW C26 H29 N2 O3 S CC1(c2cccc....
129 1A0Q Ki = 27 nM HEP C15 H22 N O6 P CCCC[C@H](....
130 2Z93 Kd = 11.1 nM END C17 H24 O7 C1C=CCO[C@....
131 2Z92 Kd = 66.7 nM ENE C22 H30 O8 C1C=CCO[C@....
132 2R0W - ASP ALA GLU PHE ARG HIS ASP SER n/a n/a
133 5EOQ - LYS ARG GLU ALA ILE VAL LYS ALA ASP GLU n/a n/a
134 3EYS Kd = 3000 nM PCA PHE ARG HIS ASP SER n/a n/a
135 2IPU - ASP ALA GLU PHE ARG HIS ASP SER n/a n/a
136 2R0Z Kd = 3400 nM ALA LYS PHE ARG HIS ASP n/a n/a
137 4YHY - M3L C9 H21 N2 O2 C[N+](C)(C....
138 3TV3 - AML MAN MAN MAN MAN MAN MAN MAN MAN n/a n/a
139 3TWC - AML MAN MAN MAN MAN MAN MAN MAN MAN n/a n/a
140 2V17 - THR ASP HIS GLY ALA GLU n/a n/a
141 1EAP - HEP C15 H22 N O6 P CCCC[C@H](....
142 5T78 Kd = 43 nM NGA ALA PRO ASP THR ARG PRO ALA PRO n/a n/a
143 5T6P Kd = 880 nM ALA PRO ASP THR ARG PRO ALA PRO n/a n/a
144 4TUO - SIA GAL SIA GLC NGA n/a n/a
145 3DV4 - KDO C8 H14 O8 C1[C@H]([C....
146 3DUU - KDO C8 H14 O8 C1[C@H]([C....
147 2HKF - LEU PRO GLY GLU GLU ASP LEU PRO GLY n/a n/a
148 1MFE - GLA MAN ABE n/a n/a
149 1MFB - GLA MAN RAM RAM ABE MAN GLA n/a n/a
150 1MFD Kd = 4.9 uM GLA MMA ABE n/a n/a
151 1MFC - GLA MAN RAM ABE n/a n/a
152 1LO3 - AN1 C18 H16 O2 Cc1c2ccccc....
153 1LO0 - BC1 C19 H17 N3 O3 CN1c2ccccc....
154 1LO2 - OX1 C18 H16 O4 CC12c3cccc....
155 3BZ4 - EAG RAM RAM GLC RAM NAG RAM RAM GLC RAM n/a n/a
156 3C6S - RAM RAM RAM GLC NAG RAM RAM RAM GLC NAG RAM n/a n/a
157 1M7D Ka = 1700000 M^-1 RAM RAE MAG n/a n/a
158 1M7I Ka = 250000 M^-1 RAM RAM RAM NAG RAO n/a n/a
159 1PZ5 Kd = 4 uM MET ASP TRP ASN MET HIS ALA ALA n/a n/a
160 1OAU Kd = 20 nM DNF SER n/a n/a
161 1A6W - NIP C14 H16 I N2 O6 c1c(cc(c(c....
162 1XF2 - DT DT DT n/a n/a
163 2OMN - IPH C6 H6 O c1ccc(cc1)....
164 2YKL - NLD C17 H25 N3 O3 CCNC(=O)CC....
165 2YK1 Kd = 7.4 nM NCT C10 H14 N2 C[N@@]1CCC....
166 5ALB - TIQ C23 H28 F2 N6 O4 S CCCSc1nc(c....
167 5ALC - TIQ C23 H28 F2 N6 O4 S CCCSc1nc(c....
168 1NGP - NPA C8 H7 N O5 c1cc(c(cc1....
169 4ODV - GP1 Z9M n/a n/a
170 1KEG - DT 64T DT DT n/a n/a
171 1EHL - 5HT DT n/a n/a
172 1C1E - ENH C10 H5 Cl6 N O2 CN1C(=O)[C....
173 1CLY - FUC GAL NAG NON FUC n/a n/a
174 1CT8 Kd = 0.3 uM TAA C20 H21 Cl2 F3 N3 O8 P c1cc(ccc1C....
175 1CE1 - GLY THR SER SER PRO SER ALA ASP n/a n/a
176 1T66 - FLU C20 H12 O5 c1ccc(c(c1....
177 3GHB - LYS GLY VAL ARG ILE GLY PRO GLY GLN ALA n/a n/a
178 2W65 - ALA CIR GLY LEU THR GLY ARG HYP GLY n/a n/a
179 5DYO - FLU C20 H12 O5 c1ccc(c(c1....
180 4UIN Kd = 24 nM QI9 C20 H24 N2 O2 COc1ccc2c(....
181 3V0W Kd = 32 nM PA1 GLC GLC GLC GM0 GLA GM0 GMH KDO KDO n/a n/a
182 3IFL - ASP ALA GLU PHE ARG HIS ASP n/a n/a
183 3IFO - ASP ALA GLU PHE ARG HIS ASP n/a n/a
184 2CGR Kd = 53 nM GAS C23 H20 N4 O2 c1ccc(cc1)....
185 1YNK - SC5 C18 H26 N4 O2 C[C@H](c1c....
186 1I7Z Kd = 0.4 uM COC C17 H21 N O4 C[N@]1[C@H....
187 2O5Z Kd = 110 mM ANO C19 H28 O2 C[C@]12CCC....
188 25C8 - GEP C19 H29 N2 O3 C[N+]1(CCC....
189 35C8 - NOX C18 H26 N2 O4 c1cc(ccc1C....
190 1FL3 Kd = 0.16 uM SPB C19 H19 N O3 c1ccc(cc1)....
191 3CFB - SPB C19 H19 N O3 c1ccc(cc1)....
192 1UB5 - SPB C19 H19 N O3 c1ccc(cc1)....
193 1IND Ka = 11000000000 M^-1 EOT C20 H28 N4 O9 S c1cc(ccc1C....
194 1ZEA Kd = 6 uM DVA DPR GLY DSN DGN DHI DTY DAS DSN n/a n/a
195 1MEX - RAC C18 H18 N2 O5 CN(C)C(=O)....
196 1UM5 - SS1 C8 H10 O C[C@@H](c1....
197 1UM4 - SH4 C17 H19 N O4 P C[C@@H](c1....
198 1VPO Kd = 0.00000145 M TES C19 H28 O2 C[C@]12CC[....
199 1C5C Kd = 110 nM TK4 C12 H11 N O7 S2 CC(=O)Nc1c....
200 2PCP Kd = 2 nM 1PC C17 H25 N c1ccc(cc1)....
201 1D6V Kd = 670 nM HOP C23 H27 N O4 c1ccc(cc1)....
202 1Q0Y Kd ~ 1 nM MOI C17 H19 N O3 C[N@]1CC[C....
203 4YHK ic50 = 4.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
204 4YHM ic50 = 4.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
205 4YHO ic50 = 2.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
206 4YHI ic50 = 4.6 nM 4CC C25 H25 N7 O3 [H]/N=C(c1....
207 3O6M Kd = 33 nM PRO LYS LEU GLU PRO TRP LYS HIS PRO n/a n/a
208 1IGJ Kd = 0.1 nM DGX C41 H64 O14 C[C@@H]1[C....
209 1UZ8 Kd = 10.75 uM MAG FUC GAL n/a n/a
210 4ODT - GP1 Z9M n/a n/a
211 1RUM - BEZ C7 H6 O2 c1ccc(cc1)....
212 1ND0 - DP4 C14 H23 N O Si C[N+]1(CCC....
213 3LEY - LEU LEU GLU LEU ASP LYS TRP ALA NH2 n/a n/a
214 1RUP - BEZ C7 H6 O2 c1ccc(cc1)....
215 1RU9 - BEZ C7 H6 O2 c1ccc(cc1)....
216 1RUL - BEZ C7 H6 O2 c1ccc(cc1)....
217 3LEX Kd = 6.44 nM LEU LEU GLU LEU ASP LYS TRP ALA NH2 n/a n/a
218 1RUK - BEZ C7 H6 O2 c1ccc(cc1)....
219 1NCW - BEZ C7 H6 O2 c1ccc(cc1)....
220 1RUA - BEZ C7 H6 O2 c1ccc(cc1)....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: 8SK; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 8SK 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5NBW; Ligand: 8SK; Similar sites found: 122
This union binding pocket(no: 1) in the query (biounit: 5nbw.bio1) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1YQC GLV 0.01393 0.41359 1.17647
2 5I0F GLC GLC 0.009375 0.40909 2.7027
3 4D06 NAR 0.01193 0.40767 2.7027
4 4OCJ NDG 0.007261 0.43699 2.80374
5 2IGA XX3 0.004162 0.4237 3.15315
6 2IGA XX2 0.004253 0.42114 3.15315
7 2ZPT A3P 0.03995 0.41156 3.15315
8 3RG9 NDP 0.02693 0.40715 3.15315
9 3RG9 WRA 0.03073 0.40715 3.15315
10 2IGA XXP 0.006921 0.40683 3.15315
11 3E7O 35F 0.02681 0.40177 3.15315
12 5C1P ADP 0.006485 0.40813 3.27103
13 1ODM ASV 0.01019 0.41574 3.6036
14 1GQG DCD 0.003167 0.43514 3.73832
15 3OZ2 OZ2 0.02019 0.41136 3.73832
16 5EOB 5QQ 0.0183 0.42879 4.05405
17 3H55 GLA 0.006088 0.40939 4.05405
18 4H6B 10Y 0.002579 0.42141 4.10256
19 4H6B 10X 0.00366 0.41953 4.10256
20 3AY6 BGC 0.04753 0.40615 4.20561
21 2ZB4 5OP 0.04079 0.40082 4.20561
22 2X34 UQ8 0.03529 0.41 4.41989
23 2X32 OTP 0.0412 0.40648 4.46927
24 5A3T MMK 0.01278 0.41776 4.5045
25 4ORM ORO 0.01214 0.44506 4.6729
26 4ORM 2V6 0.01214 0.44506 4.6729
27 4ORM FMN 0.01214 0.44506 4.6729
28 3HQP OXL 0.006661 0.41976 4.6729
29 4BG4 ADP 0.007422 0.41388 4.6729
30 2GC0 PAN 0.003806 0.42552 4.78723
31 2QZ3 XYP XYP XYP 0.009062 0.41338 4.86486
32 1ZB6 GST 0.004797 0.43746 4.88599
33 1ZB6 DIN 0.004493 0.43746 4.88599
34 2X4Z X4Z 0.01251 0.42178 5.14019
35 1I82 BGC BGC 0.0003543 0.43234 5.29101
36 1RX0 FAD 0.03383 0.4011 5.40541
37 4O9S 2RY 0.002647 0.44566 5.60748
38 1T27 PCW 0.04647 0.40051 5.60748
39 4WZV E40 0.01124 0.41368 5.625
40 3VOT ADP 0.002006 0.4262 5.85586
41 4OCV ANP 0.005183 0.42123 5.85586
42 3NW7 LGV 0.02036 0.42082 5.85586
43 3HAV ATP 0.002526 0.40082 5.85586
44 2G50 PYR 0.007874 0.42944 6.07477
45 3K5I ADP 0.00584 0.42068 6.07477
46 3K5I AIR 0.01333 0.41807 6.07477
47 4ZS4 ATP 0.01065 0.40647 6.07477
48 1ZVX FIN 0.01152 0.42471 6.13497
49 1Y0G 8PP 0.007271 0.44203 6.28272
50 4GLW 0XT 0.001307 0.4269 6.30631
51 4Y0X ADP 0.005388 0.41416 6.30631
52 1ZOA 140 0.02412 0.40958 6.30631
53 5DXT 5H5 0.0102 0.40737 6.30631
54 1SR9 KIV 0.002579 0.40543 6.30631
55 5DRB 5FJ 0.007739 0.4425 6.54206
56 2XN5 FUN 0.001564 0.43092 6.54206
57 4B9Z ACR 0.009019 0.40796 6.54206
58 2BD0 NAP 0.02611 0.40463 6.54206
59 1ERB ETR 0.004862 0.43434 6.55738
60 1U7T TDT 0.04448 0.4015 6.75676
61 4AZT LY2 0.007253 0.4007 6.75676
62 3STK PLM 0.02257 0.40893 6.81818
63 2ZMF CMP 0.008224 0.41178 6.87831
64 5F7U GLC GLC GLC 0.006167 0.41363 7.00935
65 2F2H XTG 0.01115 0.41074 7.00935
66 4USF 6UI 0.01989 0.40017 7.00935
67 1IOW ADP 0.01846 0.41331 7.20721
68 1IOW PHY 0.01846 0.41331 7.20721
69 4N70 2HX 0.04666 0.40363 7.20721
70 2GJ5 VD3 0.01109 0.42771 7.40741
71 4UWH JXM 0.004321 0.41859 7.47664
72 1FDQ HXA 0.02001 0.4056 7.63359
73 4RW3 IPD 0.00214 0.42104 7.65766
74 2GOU FMN 0.0332 0.40047 7.65766
75 3U6W KIV 0.001373 0.41423 7.94393
76 1WUB OTP 0.009828 0.43533 8.10811
77 5K21 6QF 0.004475 0.41075 8.10811
78 1REQ DCA 0.03816 0.40581 8.10811
79 4N1T 2GD 0.002278 0.45744 8.1761
80 4OPC FDA 0.03199 0.43618 8.41121
81 4OPC PGT 0.03576 0.43618 8.41121
82 2O3Z AI7 0.01462 0.4195 8.41121
83 1QD1 FON 0.01521 0.4073 8.41121
84 5A5W GUO 0.003426 0.4567 8.55856
85 5DQ8 FLF 0.003226 0.43826 8.75
86 2TCL RO4 0.009794 0.41002 8.87574
87 1QZR ANP 0.022 0.4009 8.8785
88 2QK4 ATP 0.005123 0.40046 8.8785
89 5H9O GLC 0.008231 0.40337 9.09091
90 5IH9 6BF 0.006696 0.43653 9.34579
91 5MZI FAD 0.02779 0.42393 9.34579
92 5MZI FYK 0.02854 0.42393 9.34579
93 5I35 ANP 0.01081 0.40227 9.34579
94 2Q7D ANP 0.02063 0.40227 9.34579
95 5JSP DQY 0.0008004 0.42077 9.45274
96 5HJO XD3 0.006847 0.4026 9.63855
97 1TT8 PHB 0.0198 0.40314 9.7561
98 2ZRU FMN 0.007661 0.43581 9.81308
99 2NNQ T4B 0.02926 0.40729 9.92366
100 2ZYI STE 0.01041 0.4153 10.2804
101 4JD3 COA 0.04331 0.4021 10.7477
102 3W0O ADP 0.006944 0.42955 10.8108
103 3W0O HY0 0.006944 0.42955 10.8108
104 2BKK ADP 0.008643 0.4024 11.215
105 1ATL 0QI 0.01297 0.40759 11.3861
106 3ORK AGS 0.01577 0.40654 11.6822
107 5F2T PLM 0.01129 0.40709 11.7117
108 3APT FAD 0.01592 0.40916 12.1495
109 1EHI ADP 0.003916 0.42697 12.1622
110 3LPP KTL 0.0107 0.40247 12.1622
111 2DIO EOD 0.007467 0.4076 12.234
112 3V4S ATP 0.009616 0.41215 12.6168
113 3V4S ADP 0.02819 0.40512 12.6168
114 4C2V YJA 0.01985 0.40827 13.6364
115 3FW4 CAQ 0.01311 0.41189 15.1685
116 5DKY NOJ 0.005327 0.41868 16.3551
117 4O12 2QG 0.0256 0.44698 17.5676
118 1N5S ADL 0.002507 0.43182 21.4286
119 4X6F 3XU 0.02932 0.4082 35.2381
120 1H8S AIC 0.000001168 0.5591 42.3423
121 4WO4 JLS 0.01805 0.41994 46.2617
122 3QUZ QUV 0.03103 0.41597 48.1308
123 3RUG DB6 0.03887 0.4078 50
Pocket No.: 2; Query (leader) PDB : 5NBW; Ligand: 8SK; Similar sites found: 13
This union binding pocket(no: 2) in the query (biounit: 5nbw.bio2) has 17 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5XDT ZI7 0.01963 0.40469 2.33645
2 5N87 N66 0.02789 0.40535 2.7027
3 3RJ5 NAD 0.03878 0.40195 3.27103
4 3E2M E2M 0.02133 0.40016 3.78378
5 5VC5 96M 0.01475 0.41078 5.60748
6 4JIQ FMN 0.01287 0.41228 6.54206
7 4JIQ 1L5 0.01287 0.41228 6.54206
8 1J3R 6PG 0.002104 0.42425 6.84211
9 1OX5 1PR 0.02585 0.4001 9.81308
10 2YW2 ATP 0.01569 0.40029 9.90991
11 1UU6 BGC BGC BGC BGC 0.02019 0.40273 10.8108
12 3E1T FAD 0.04378 0.40351 11.215
13 3OV6 MK0 0.02808 0.40076 17.2897
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