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Receptor
PDB id Resolution Class Description Source Keywords
5O98 1.55 Å EC: 1.-.-.- BINARY COMPLEX OF CATHARANTHUS ROSEUS VITROSAMINE SYNTHASE W CATHARANTHUS ROSEUS ALKALOID NATURAL PRODUCT BIOSYNTHESIS SHORT CHAIN DEHYDROOXIDOREDUCTASE
Ref.: DISCOVERY OF A SHORT-CHAIN DEHYDROGENASE FROM CATHA ROSEUS THAT PRODUCES A NEW MONOTERPENE INDOLE ALKAL CHEMBIOCHEM V. 19 940 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP B:501;
A:501;
Valid;
Valid;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5O98 1.55 Å EC: 1.-.-.- BINARY COMPLEX OF CATHARANTHUS ROSEUS VITROSAMINE SYNTHASE W CATHARANTHUS ROSEUS ALKALOID NATURAL PRODUCT BIOSYNTHESIS SHORT CHAIN DEHYDROOXIDOREDUCTASE
Ref.: DISCOVERY OF A SHORT-CHAIN DEHYDROGENASE FROM CATHA ROSEUS THAT PRODUCES A NEW MONOTERPENE INDOLE ALKAL CHEMBIOCHEM V. 19 940 2018
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 318 families.
1 5O98 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 5O98 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 5LCX - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 5L4S - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 5LDG - IT9 C10 H14 O CC1=CC(=O)....
4 3O26 - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
5 5O98 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
6 5L53 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5O98; Ligand: NAP; Similar sites found with APoc: 577
This union binding pocket(no: 1) in the query (biounit: 5o98.bio1) has 32 residues
No: Leader PDB Ligand Sequence Similarity
1 4HBM 0Y7 None
2 5C2N NAG None
3 5ULP KB1 1.1194
4 2C5A NAD 1.26183
5 2C5A GDC 1.26183
6 1LDN NAD 1.26582
7 4BLW AMP 1.38408
8 1XK5 TPG 1.47059
9 1TI7 NAP 1.57729
10 2VUT NAD 1.57729
11 3B20 NAD 1.57729
12 3H5N ATP 1.57729
13 1YQZ FAD 1.57729
14 1KEV NDP 1.57729
15 3B1J NAD 1.57729
16 1YKF NAP 1.57729
17 4IRP UDP 1.59363
18 3O7W SAM 1.70068
19 3GU3 SAH 1.76056
20 1RM4 NDP 1.89274
21 6A0S NDP 1.89274
22 6A0S HSE 1.89274
23 1DSS NAD 1.89274
24 5UAV NDP 1.89274
25 2DBZ NAP 1.89274
26 5W0N UPU 1.89274
27 5UAV TFB 1.89274
28 5FI3 NAP 1.89274
29 1PJS NAD 1.89274
30 4L8V NAP 1.89274
31 1GV0 NAD 1.93548
32 2UYQ SAM 1.93548
33 2PWY SAH 1.93798
34 3MB5 SAM 1.96078
35 5O9F 9ON 1.98864
36 5O9F NAD 1.98864
37 6D5X 3PO 2.04082
38 3DLS ADP 2.08955
39 1GY8 NAD 2.2082
40 6EL3 NAP 2.2082
41 5JAQ NAI 2.2082
42 4KOA NDP 2.2082
43 2G5C NAD 2.2082
44 1RJD SAM 2.2082
45 1SC6 NAD 2.2082
46 5L1O 7PF 2.2082
47 5X20 NAD 2.24359
48 1HYH NAD 2.26537
49 3MQ2 SAH 2.29358
50 2P41 SAH 2.29508
51 3H8V ATP 2.39726
52 3B1F NAD 2.41379
53 1WP4 NDP 2.42215
54 2CVZ NDP 2.42215
55 1ZQ9 SAM 2.45614
56 1HDR NAD 2.45902
57 5KO1 6UY 2.4735
58 5LUB 3Y7 2.52366
59 1PZG A3D 2.52366
60 2V7B BEZ 2.52366
61 1E5Q NDP 2.52366
62 2WA2 SAM 2.52366
63 1MUU NAD 2.52366
64 4N49 SAM 2.52366
65 3IP8 B85 2.52366
66 1MV8 NAD 2.52366
67 5AOV NAP 2.52366
68 5LD5 NAD 2.52366
69 4FZV SAM 2.52366
70 4M52 M52 2.52366
71 4M52 FAD 2.52366
72 1V59 FAD 2.52366
73 4ZRN NAD 2.5641
74 4ZRN UPG 2.5641
75 2PV7 NAD 2.68456
76 2GN3 MMA 2.77778
77 2GN3 MAN 2.77778
78 2GNB MAN 2.77778
79 1Q8V MAN MAN 2.77778
80 2PHX MAN MAN 2.77778
81 1Q8S MAN MMA 2.77778
82 2PHU MAN MAN 2.77778
83 2GMM MAN MAN 2.77778
84 1Q8Q MAN MMA 2.77778
85 5EES NAP 2.83401
86 1V35 NAI 2.83912
87 5Y1G AKB 2.83912
88 5Y1G NAD 2.83912
89 1I2B USQ 2.83912
90 1I2B NAD 2.83912
91 1I2B UPG 2.83912
92 5MLR NAP 2.83912
93 5MLR GRQ 2.83912
94 2BHZ MAL 2.83912
95 4GKV NAD 2.83912
96 5A1T NAI 2.83912
97 2A92 NAI 2.83912
98 5ERG SAM 2.83912
99 5JJR SAH 2.83912
100 3I73 ADP 2.83912
101 5FA5 MTA 2.83912
102 1BZL FAD 2.83912
103 3OJO NAD 2.83912
104 5A1T OXM 2.83912
105 3QVP FAD 2.83912
106 2GLX NDP 2.83912
107 3CYQ AMU 2.89855
108 3A4T SFG 2.91971
109 2HYV UAP SGN IDS SGN IDS 2.92208
110 5CG1 NAD BBN 2.95082
111 2WPB ZZI 2.96053
112 2XVM SAH 3.01508
113 5Y8L NAD 3.05085
114 3A4V PYR 3.15457
115 3A4V NAD 3.15457
116 5MSO NAP 3.15457
117 1BXK NAD 3.15457
118 1KEW NAD 3.15457
119 1KEW TYD 3.15457
120 9LDT NAD 3.15457
121 9LDB NAD 3.15457
122 1LDM NAD 3.15457
123 4ZVV NAD 3.15457
124 4ZVV GN0 3.15457
125 1EBF NAD 3.15457
126 1QH8 HCA 3.15457
127 1J0X NAD 3.15457
128 2FZW NAD 3.15457
129 3ORF NAD 3.18725
130 5J6Y BGC 3.19149
131 5J6Y GLC 3.19149
132 1WDK NAD 3.21678
133 2F1K NAP 3.22581
134 2HK9 ATR 3.27273
135 2HK9 NAP 3.27273
136 2GUC MAN 3.27869
137 2GUD MAN 3.27869
138 2HYR BGC GLC 3.27869
139 2NU5 NAG 3.27869
140 2NUO BGC 3.27869
141 2GUD BMA 3.27869
142 1CER NAD 3.32326
143 3RFV NAI 3.37079
144 3RFV 15L 3.37079
145 1QG6 NAD 3.44828
146 1QG6 TCL 3.44828
147 1T3D CYS 3.46021
148 5MDH NAD 3.47003
149 5MPT SAH 3.47003
150 1EZ4 NAD 3.47003
151 3LKZ SFG 3.47003
152 1GZ4 ATP 3.47003
153 1U1I NAD 3.47003
154 5Z20 NAI 3.47003
155 2CDU ADP 3.47003
156 4MDH NAD 3.47003
157 1FP2 SAH 3.47003
158 1M2W NAD 3.47003
159 2E5V FAD 3.47003
160 1D1T NAD 3.48525
161 6DNT NAD 3.48837
162 4O1M NAD 3.49206
163 2YY7 NAD 3.52564
164 4K7O EKZ 3.57143
165 3EVG SAH 3.63636
166 3QV1 NAD 3.65854
167 5T9E NAP 3.69004
168 5CUQ NSC 3.74532
169 4LZB URA 3.78151
170 1N7G NDP 3.78549
171 6BWL NAD 3.78549
172 1N7G GDR 3.78549
173 1FDJ 2FP 3.78549
174 1UWK URO 3.78549
175 1UWK NAD 3.78549
176 1FDJ 13P 3.78549
177 4R5M NAP 3.78549
178 4RQU NAD 3.78549
179 1FEC FAD 3.78549
180 2GCG NDP 3.78549
181 1RM0 D6P 3.78549
182 4R5M 4NO 3.78549
183 1HDG NAD 3.78549
184 1RM0 NAI 3.78549
185 2D2I NAP 3.78549
186 2A14 SAH 3.80228
187 1TL2 NDG 3.81356
188 5KWW 6YA 3.87324
189 4YGM URA 3.87931
190 1J5P NAD 3.95257
191 5T9F TYR 4.05904
192 5T9F NAP 4.05904
193 5K4W NAI 4.10095
194 5K4W THR 4.10095
195 3I6I NDP 4.10095
196 2GZ3 NAP 4.10095
197 3FSY SCA 4.10095
198 2I3G NAP 4.10095
199 2IZ1 ATR 4.10095
200 5UR0 NAD 4.10095
201 1C1X NAD 4.10095
202 4XZ3 COA 4.10095
203 1BW9 NAD 4.10095
204 1BXG NAD 4.10095
205 2JHF NAD 4.10095
206 1U3U NAD 4.10095
207 1U3U BNF 4.10095
208 1SAY PYR 4.10095
209 5I34 GDP 4.10095
210 1H82 FAD 4.10095
211 2ZWA SAH 4.10095
212 1YB5 NAP 4.10095
213 1H82 GZZ 4.10095
214 1SQF SAM 4.10095
215 2VT3 ATP 4.18605
216 1GUZ NAD 4.19355
217 5AYV NAP 4.20712
218 5AYV KPL 4.20712
219 1H70 CIR 4.31373
220 1VM6 NAD 4.38596
221 5BJX NAD 4.4164
222 5BJX UDP 4.4164
223 2X6T NAP 4.4164
224 3GFB NAD 4.4164
225 1H2B NAJ 4.4164
226 2DFV NAD 4.4164
227 4M38 SAH 4.4164
228 4M37 SAH 4.4164
229 1CDO NAD 4.4164
230 6AC9 ANP 4.4164
231 3M6W SAM 4.4164
232 5U8U FAD 4.4164
233 2OWZ CIT 4.4164
234 3UB7 ACM 4.41989
235 6HDT BTN 4.51128
236 4DVE BTN 4.54545
237 2II3 CAO 4.58015
238 1OFL ASG GCD 4.73186
239 3KB6 NAD 4.73186
240 4M00 SUC 4.73186
241 1O6Z NAD 4.73186
242 5WGG SAM 4.73186
243 1JH7 UVC 4.7619
244 4OKE AMP 4.7619
245 1I36 NAP 4.92424
246 5DOZ NDP 5.02959
247 4GLL NAD 5.04732
248 1OC2 TDX 5.04732
249 1OC2 NAD 5.04732
250 1V6A TRE 5.04732
251 3ABI NAD 5.04732
252 3GGO NAI 5.04732
253 3GGO ENO 5.04732
254 3C1O NAP 5.04732
255 3TWO NDP 5.04732
256 3WQQ IB3 5.04732
257 3WQQ NDP 5.04732
258 1TZD ADP 5.09091
259 5KKA 6V0 5.12821
260 1NYT NAP 5.16605
261 3OZG SSI 5.2
262 1LUA NAP 5.22648
263 2PKA BEN 5.26316
264 4JLS 3ZE 5.26316
265 1F8G NAD 5.36278
266 4OOE FOM 5.36278
267 4OOE NDP 5.36278
268 2OOR NAD 5.36278
269 1X87 NAD 5.36278
270 5ME4 HP4 5.36278
271 2DT5 NAD 5.36278
272 2X05 X05 5.36278
273 6AYU F6P 5.36278
274 1GQ2 NAP 5.36278
275 1P0F NAP 5.36278
276 1D7O NAD 5.38721
277 1D7O TCL 5.38721
278 1EQ2 NAP 5.48387
279 2DKN NAI 5.4902
280 5YXC CIT 5.55556
281 5G48 1FL 5.67823
282 5THY SAH 5.67823
283 5X2N ALA 5.67823
284 2B4R NAD 5.67823
285 2VYN NAD 5.67823
286 5THZ SAH 5.67823
287 1GAD NAD 5.67823
288 4Q9N NAI 5.7047
289 1KYQ NAD 5.83942
290 1NVT NAP 5.92335
291 2DC1 NAD 5.9322
292 1Z45 NAD 5.99369
293 3BAZ NAP 5.99369
294 1LLU NAD 5.99369
295 3CIF NAD 5.99369
296 5JE8 NAD 5.99369
297 3GVL SLB SIA 5.99369
298 1GPE FAD 5.99369
299 1R37 NAD 6.05187
300 4FGC PQ0 6.06061
301 4DPL NAP 6.12813
302 4EKV BTN 6.28931
303 4TQG NDP 6.30915
304 2C29 NAP 6.30915
305 1YS4 NAP 6.30915
306 2C29 DQH 6.30915
307 4HNN LYS 6.35838
308 5CAE COA 6.38978
309 2FR1 NDP 6.58436
310 4CFU 2WC 6.60066
311 1P77 ATR 6.61765
312 5H81 NAP 6.62461
313 1CF2 NAP 6.62461
314 3WV8 ATP 6.62461
315 3V1Y NAD 6.62461
316 4Z0H NAD 6.62461
317 1X7D NAD 6.62461
318 2XQ0 BES 6.62461
319 5YU3 PRO 6.62461
320 5YU3 NAD 6.62461
321 4YCA NDP 6.80272
322 5G6U YJM 6.89655
323 1RKX NAD 6.94006
324 1E7S NAP 6.94006
325 5ZI2 NAD 6.94006
326 5ZI2 ADP 6.94006
327 3WLE NAD 6.94006
328 3CMC NAD 6.94006
329 5NUF NAD 6.94006
330 5NUE NAD 6.94006
331 1FK8 NAD 7.00389
332 2BKA NDP 7.02479
333 5BW4 SAM 7.11611
334 1WVG APR 7.25552
335 6D6Y SAH 7.25552
336 6FDF SAH 7.25552
337 4J7U YTZ 7.29167
338 4J7U NAP 7.29167
339 5O96 SAM 7.34694
340 1Z6Z NAP 7.44681
341 5L95 AMP 7.5
342 1T26 GBD 7.57098
343 1T26 NAI 7.57098
344 4XQC 13D 7.57098
345 4XQC NAD 7.57098
346 2WPF WPF 7.57098
347 6BII NAP 7.57098
348 5EYW PGA 7.63052
349 1HYE NAP 7.66773
350 1LES GLC FRU 7.69231
351 4JK3 NAD 7.72201
352 5N2I NAP 7.75862
353 4C4A SAH 7.88644
354 1NPD NAD 7.88644
355 4XDZ NDP 7.88644
356 1NVM NAD 7.88644
357 5X9D 80F 7.89474
358 5BSH PRO 7.94224
359 2PZM UDP 8.20189
360 2PZM NAD 8.20189
361 1LTH NAD 8.20189
362 5XNC MTA 8.20189
363 3AKK ADP 8.20189
364 3KIF GDL 8.49057
365 5IN4 6CK 8.51735
366 5IN4 GDP 8.51735
367 5IN4 NAP 8.51735
368 3LAD FAD 8.61345
369 4D79 ATP 8.69565
370 1UXG NAD 8.73786
371 1UXG FUM 8.73786
372 1ORR NAD 8.83281
373 4LHD GLY 8.83281
374 3VPD CIT 8.83281
375 3X0D SAH 8.83281
376 6FP4 FAD 8.86288
377 6FP4 E1T 8.86288
378 3OJF NDP 8.94942
379 3OJF IMJ 8.94942
380 4CNE SAH 8.98876
381 5XWV NDP 9.14826
382 5XWV 8H6 9.14826
383 1PL6 NAD 9.14826
384 5ODQ 9SB 9.23913
385 3LU1 NAD 9.34066
386 4PIV NDP 9.39394
387 3A06 NDP 9.46372
388 1XSE NDP 9.49153
389 6C0B MLI 9.61539
390 3VPH OXM 9.67742
391 3VPH NAD 9.67742
392 1TE2 PGA 9.73451
393 4U7W NDP 9.7619
394 2CVQ NDP 9.77918
395 2AHR NAP 10.0386
396 3QFA FAD 10.3448
397 1SB8 UD2 10.4101
398 1SB8 NAD 10.4101
399 5Z21 NAI 10.4101
400 5DF1 NAP 10.7256
401 5DF1 58X 10.7256
402 1RPN NDP 11.041
403 1Y1P NMN AMP PO4 11.041
404 3IWD M2T 11.2903
405 1NNU NAD 11.6667
406 1NNU TCT 11.6667
407 6AA8 NAD 11.9205
408 5YEC ATP 11.9874
409 3OIG NAD 12.0301
410 5OOH NAP 12.1359
411 5OOH 9ZZ 12.1359
412 3KO8 NAD 12.1795
413 1JAY NAP 12.2642
414 3P7G MAN 12.3288
415 2HMT NAI 12.5
416 1W8D NAP 12.5828
417 1W73 NAP 12.5828
418 2NVK FAD 12.6183
419 4PVD NDP 12.9338
420 5WP4 SAH 12.9338
421 4KU7 PCG 13.0719
422 2PD4 NAD 13.0909
423 2PD4 DCN 13.0909
424 5EIN NAP 13.2492
425 3ULK NDP 13.2492
426 1GPJ CIT 13.2492
427 2Q1S NAI 13.2626
428 1W6U NAP 13.5762
429 4P86 5GP 13.6612
430 4EUE NAI 14.1956
431 5ZEC NAP 14.1956
432 1LSS NAD 14.2857
433 2Q1W NAD 14.4144
434 3H4V DVP 14.5833
435 3H4V NAP 14.5833
436 1SOW NAD 14.6341
437 2EXX NAP 14.7059
438 4G5H NAP 14.8265
439 4G5H UD7 14.8265
440 5ZZ6 ADP 14.9038
441 5ZZ6 NAD 14.9038
442 4J1Q NDP 15.142
443 1YXM ADE 15.1815
444 4HXY NDP 15.4574
445 1A5Z NAD 15.4574
446 1U7T TDT 15.7088
447 1U7T NAD 15.7088
448 4D3F NAP 15.7729
449 2VZ0 NAP 16.0448
450 2VZ0 D64 16.0448
451 2WD7 NAP 16.0448
452 1UDB UFG 16.0883
453 1UDB NAD 16.0883
454 6CS8 F9Y 16.1716
455 6CEP NAD 16.4038
456 6CEP OXM 16.4038
457 1XVB BHL 16.4706
458 1E3W NAD 16.4751
459 1E6W NAD 16.5385
460 4CM9 NAP 17.0139
461 3BMN NAP 17.0139
462 4CLR NAP 17.0139
463 4CMI NAP 17.0139
464 3JQ9 NAP 17.0139
465 4CM8 NAP 17.0139
466 4CM4 NAP 17.0139
467 3BMO NAP 17.0139
468 3JQA NAP 17.0139
469 3JQF NAP 17.0139
470 3BMQ NAP 17.0139
471 3JQG NAP 17.0139
472 3JQ7 NAP 17.0139
473 4CLO NAP 17.0139
474 4CME NAP 17.0139
475 3JQB NAP 17.0139
476 3JQ8 NAP 17.0139
477 2GDZ NAD 17.2285
478 1EK6 NAI 17.3502
479 1EK6 UPG 17.3502
480 1O5I NAD 17.6707
481 4D42 NAP 17.7305
482 4D42 W0I 17.7305
483 3AFN NAP 17.8295
484 1GEG NAD 17.9688
485 2WYV NAD 18.0077
486 1PR9 NAP 18.0328
487 3D3W NAP 18.0328
488 6F9Q NAD 18.2965
489 1R6D NAD 18.612
490 1R6D DAU 18.612
491 3RJ5 NAD 18.8976
492 4RHE FMN 19.1388
493 5Z2L NDP 19.1837
494 1OAA OAA 19.305
495 3AY6 NAI 19.3309
496 3AY6 BGC 19.3309
497 2GN4 NDP 20.1893
498 2GN4 UD1 20.1893
499 3L9W AMP 20.1893
500 5L3W GDP 21.1356
501 1GEE NAD 21.8391
502 1GZ6 NAI 22.082
503 3ZV6 4HB 22.4199
504 3ZV6 NAD 22.4199
505 3V1U NAD 22.7129
506 3OID NDP 23.2558
507 3HB5 NAP 24.2902
508 2Q46 NAP 24.5059
509 5I7S E9P 24.6377
510 5I7S NAD 24.6377
511 3CH6 NAP 24.8252
512 3CH6 311 24.8252
513 4OHU 2TK 25.6055
514 4OHU NAD 25.6055
515 1NFQ NAI 26.1538
516 1A27 NAP 26.6436
517 4K26 NDP 26.8116
518 4K26 SFF 26.8116
519 4FC7 COA 27.0758
520 4FC7 NAP 27.0758
521 5OVL NAP 27.6667
522 5OVK NDP 27.7344
523 2Q2V NAD 28.2353
524 2BD0 NAP 28.2787
525 1H5Q NAP 28.3019
526 5EJ2 NAD 28.5714
527 1ZBQ NAD 28.7066
528 4URF NAD 29.0323
529 2B4Q NAP 29.7101
530 1ZEM NAD 29.771
531 2AE2 NAP 30.7692
532 2AE2 PTO 30.7692
533 4NBT NAD 30.8333
534 4QED NAP 31.0484
535 5O42 9JW 31.3869
536 5O42 BGC 31.3869
537 5O42 NAD 31.3869
538 1HDC CBO 31.4961
539 3O03 NAP 32.3024
540 4ZA2 NAD 32.4111
541 6CI9 NAP 33.2046
542 6CI9 F3V 33.2046
543 1G0N PHH 33.5689
544 1G0N NDP 33.5689
545 2RH4 EMO 33.574
546 2RIF AMP 34.0426
547 3QWI CUE 34.0741
548 3QWI NAP 34.0741
549 1XKQ NDP 36.0714
550 5B4T NAD 36.1538
551 5B4T 3HR 36.1538
552 1XHL NDP 36.3636
553 3WXB NDP 36.9176
554 4CQM NAP 37.7049
555 1AE1 NAP 38.0952
556 1X1T NAD 38.8462
557 2WSB NAD 38.9764
558 2CFC NAD 39.2
559 3NUG NAD 39.6761
560 3ICC NAP 40
561 5YRG BGC GLC 40.8451
562 5YRL GLC GLC 41.5493
563 5YRJ BGC GLC 41.5493
564 5YRM BGC GLC 41.5493
565 2DTX BMA 41.6667
566 3SJ7 NDP 42.4603
567 1Q7B NAP 43.4426
568 1ZK4 AC0 44.6215
569 1ZK4 NAP 44.6215
570 1UZN NAP 44.9393
571 2ZAT NAP 45
572 3RKR NAP 45.0382
573 1VL8 NAP 45.3184
574 3VZS CAA 46.6926
575 3VZS NAP 46.6926
576 5OJI NAP 49.2308
577 5OJI ISN 49.2308
Pocket No.: 2; Query (leader) PDB : 5O98; Ligand: NAP; Similar sites found with APoc: 19
This union binding pocket(no: 2) in the query (biounit: 5o98.bio2) has 32 residues
No: Leader PDB Ligand Sequence Similarity
1 1ZK7 FAD 1.89274
2 3AI8 HNQ 1.95312
3 6D5X 5AD 2.04082
4 4DE3 DN8 2.6616
5 2ZV2 609 2.68456
6 5E70 RCD 3.47003
7 1YJQ NAP 3.47003
8 5XQL C2E 4.4164
9 5TQZ GLC 4.66667
10 6F97 FAD 5.04732
11 2RI1 GLP 5.10638
12 5AX9 4KT 5.19481
13 6GUE FB8 7.57098
14 4RDH AMP 8.33333
15 3KJQ B94 9.47368
16 3EJ0 11X 11.041
17 4DO1 ANN 12.3028
18 4WES HCA 12.9338
19 4Z28 BTN 26.1194
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