Receptor
PDB id Resolution Class Description Source Keywords
5OJY 1.85 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CO-COMPLEX STRUCTURE OF REGULATOR PROTEIN 2 (PAMR2) WITH PAM FROM STREPTOMYCES ALBONIGER STREPTOMYCES ALBONIGER TRANSCRIPTION REGULATOR TETR FAMILY TRANSCRIPTION REGULATORSTREPTOMYCES ALBONIGER REGULATOR PROTEIN 2 PAMAMYCIN BIOSTRANSCRIPTION
Ref.: DESIGN, DEVELOPMENT AND APPLICATION OF WHOLE-CELL B ANTIBIOTIC-SPECIFIC BIOSENSOR. METAB. ENG. V. 47 263 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
CIT A:303;
Valid;
none;
submit data
192.124 C6 H8 O7 C(C(=...
GOL A:301;
A:302;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
9XB A:304;
Valid;
none;
submit data
607.861 C35 H61 N O7 CCC[C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5OJY 1.85 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CO-COMPLEX STRUCTURE OF REGULATOR PROTEIN 2 (PAMR2) WITH PAM FROM STREPTOMYCES ALBONIGER STREPTOMYCES ALBONIGER TRANSCRIPTION REGULATOR TETR FAMILY TRANSCRIPTION REGULATORSTREPTOMYCES ALBONIGER REGULATOR PROTEIN 2 PAMAMYCIN BIOSTRANSCRIPTION
Ref.: DESIGN, DEVELOPMENT AND APPLICATION OF WHOLE-CELL B ANTIBIOTIC-SPECIFIC BIOSENSOR. METAB. ENG. V. 47 263 2018
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 309 families.
1 5OJY - 9XB C35 H61 N O7 CCC[C@H]1C....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 263 families.
1 5OJY - 9XB C35 H61 N O7 CCC[C@H]1C....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 221 families.
1 5OJY - 9XB C35 H61 N O7 CCC[C@H]1C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: CIT; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 CIT 1 1
2 7QD 0.653846 0.958333
3 HCA 0.576923 0.884615
4 MAH 0.44 0.807692
Ligand no: 2; Ligand: 9XB; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 9XB 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5OJY; Ligand: 9XB; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 5ojy.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 5OJY; Ligand: 9XB; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5ojy.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 5OJY; Ligand: CIT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 5ojy.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 5OJY; Ligand: CIT; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 5ojy.bio1) has 7 residues
No: Leader PDB Ligand Sequence Similarity
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