Receptor
PDB id Resolution Class Description Source Keywords
5UFQ 2.2 Å EC: 7.-.-.- K-RASG12D(GNP)/R11.1.6 COMPLEX HOMO SAPIENS RAS GTPASE COMPLEX INHIBITOR HYDROLASE-DE NOVO PROTEIN C
Ref.: AN ENGINEERED PROTEIN ANTAGONIST OF K-RAS/B-RAF INT SCI REP V. 7 5831 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP A:201;
B:201;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
CA A:205;
B:204;
Part of Protein;
Part of Protein;
none;
none;
submit data
40.078 Ca [Ca+2...
CD A:206;
B:205;
Invalid;
Invalid;
none;
none;
submit data
112.411 Cd [Cd+2...
CL A:204;
A:203;
B:203;
D:101;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
35.453 Cl [Cl-]
MG B:202;
A:202;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5UFQ 2.2 Å EC: 7.-.-.- K-RASG12D(GNP)/R11.1.6 COMPLEX HOMO SAPIENS RAS GTPASE COMPLEX INHIBITOR HYDROLASE-DE NOVO PROTEIN C
Ref.: AN ENGINEERED PROTEIN ANTAGONIST OF K-RAS/B-RAF INT SCI REP V. 7 5831 2017
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 250 families.
1 5UFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 5UFE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 217 families.
1 5UFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 5UFE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 181 families.
1 5UFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 5UFE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5UFQ; Ligand: GNP; Similar sites found: 366
This union binding pocket(no: 1) in the query (biounit: 5ufq.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2QZ4 ADP 0.00006365 0.51588 None
2 2Y65 ADP 0.000003846 0.40558 None
3 1R0X ATP 0.00007723 0.40078 1.80723
4 4SGA ACE PRO ALA PRO PHE 0.01033 0.4116 2.40964
5 1HTW ADP 0.00004762 0.42072 2.53165
6 2Q2Y ADP 0.0008017 0.44979 3.01205
7 2Q2Y MKR 0.000785 0.449 3.01205
8 2ZJ5 ADP 0.01794 0.41847 3.27869
9 3H86 AP5 0.001326 0.43446 3.61446
10 4RZ3 ADP 0.0002138 0.42563 3.61446
11 4GOX A3P 0.001104 0.41695 3.61446
12 5HWK BEZ 0.02069 0.41561 3.61446
13 2ZFI ADP 0.000007123 0.57584 4.21687
14 2DPY ADP 0.0001767 0.52051 4.21687
15 2PL3 ADP 0.0001666 0.51479 4.21687
16 1IN4 ADP 0.0003841 0.41686 4.21687
17 1P72 ADP 0.003348 0.41518 4.21687
18 3BOS CDP 0.0001462 0.51101 4.81928
19 4NU0 AP5 0.001483 0.43616 4.81928
20 5I34 GDP 0.00003513 0.42954 4.81928
21 1KO8 6PG 0.000856 0.44906 4.91803
22 1VHT BA3 0.0003781 0.40334 4.91803
23 4YDS ATP 0.00002033 0.56933 5.42169
24 5GVR LMR 0.0003317 0.50535 5.42169
25 4OHY ANP 0.00008675 0.4742 5.42169
26 2KIN ADP 0.000001531 0.40253 5.42169
27 2PZE ATP 0.000004502 0.62017 6.0241
28 5J1J ANP 0.00002656 0.49996 6.0241
29 3ZS9 ADP ALF 0.00002311 0.49502 6.0241
30 2WOJ ADP ALF 0.00003435 0.4785 6.0241
31 2B8W ALF 5GP 0.00007688 0.46709 6.0241
32 3IO3 ADP 0.01062 0.40508 6.0241
33 1O8B ABF 0.02618 0.40326 6.0241
34 4R98 GNH 0.000001616 0.47265 6.27306
35 4LC1 GDP 0.000000002904 0.7433 6.55738
36 1F9V ADP 0.0000074 0.59898 6.55738
37 4WZ6 ATP 0.00001263 0.58793 6.55738
38 1JI0 ATP 0.00001351 0.57855 6.55738
39 3ZQ6 ADP ALF 0.00001728 0.4898 6.55738
40 5XDR ADP 0.001104 0.4624 6.55738
41 1Z6T ADP 0.0002955 0.41321 6.55738
42 2ZPA ADP 0.0002738 0.47092 6.62651
43 3COB ADP 0.0000008337 0.42159 6.62651
44 4WOP CTP 0.00004352 0.50091 7.11111
45 1G3Q ADP 0.00003079 0.53738 7.22892
46 5BQ5 ADP BEF 0.0001009 0.50644 7.22892
47 2OBM ADP 0.0004971 0.50434 7.22892
48 1FP6 ADP 0.00003977 0.43733 7.22892
49 1Z83 AP5 0.005097 0.4089 7.22892
50 1F2U ATP 0.001591 0.41353 7.38255
51 1TAD GDP 0.00000006463 0.5655 7.83133
52 1TAD ALF 0.00000006463 0.5655 7.83133
53 2XTN GTP 0.000001589 0.52703 7.83133
54 3TBK ANP 0.0003807 0.50317 7.83133
55 4XTR ADP 0.00005129 0.50303 7.83133
56 3T34 GDP 0.000061 0.48495 7.83133
57 4XVU ATP 0.00007072 0.48228 7.83133
58 4XTR ATP 0.00007396 0.48147 7.83133
59 2JLR ANP 0.0003422 0.47626 7.83133
60 4GBM A3P 0.002254 0.41978 7.83133
61 1UKZ ADP 0.006277 0.40515 7.83133
62 1OXV ANP 0.00004665 0.40055 7.83133
63 2XT3 ADP 0.000002289 0.6304 8.19672
64 5FTB ANP 0.0002191 0.49057 8.19672
65 5VGR GDP 0.0002296 0.47914 8.19672
66 4IEE AGS 0.0008431 0.47911 8.19672
67 5I0H ADP BEF 0.00001114 0.47851 8.19672
68 4QOS ADP 0.0004844 0.47433 8.19672
69 3FWY ADP 0.0000093 0.46698 8.19672
70 5FHD ADP ALF 0.0006389 0.45045 8.19672
71 1NJF AGS 0.0001757 0.44146 8.19672
72 4PJ3 ANP 0.002266 0.43841 8.19672
73 1M7G ADX 0.000854 0.43822 8.19672
74 4E03 ADP 0.0000286 0.43368 8.19672
75 4MKF AP5 0.002118 0.433 8.19672
76 1NJF ADP 0.0001987 0.42815 8.19672
77 1M7G ADP 0.001377 0.42676 8.19672
78 1M7G AV2 0.000008625 0.42653 8.19672
79 3FVQ ATP 0.0003323 0.42403 8.19672
80 3RC3 ANP 0.01744 0.4123 8.19672
81 2NYR SVR 0.03745 0.40315 8.19672
82 2RCN GDP 0.00000000005282 0.82927 8.43373
83 1CS4 GSP 0.00000004714 0.58043 8.43373
84 2OM2 GDP 0.0000007698 0.57668 8.43373
85 1AZT GSP 0.00000004655 0.57098 8.43373
86 1Y3A GDP 0.0000007161 0.56518 8.43373
87 3IIJ ADP 0.00001688 0.55732 8.43373
88 1SVK ALF GDP 0.00000009032 0.55161 8.43373
89 1BH2 GSP 0.0000002125 0.54714 8.43373
90 3BFX A3P 0.001549 0.43769 8.43373
91 4WEI GLC GAL 0.023 0.40778 8.43373
92 3EC1 GDP 0.000000006133 0.71587 9.03614
93 3LRE ADP 0.000000489 0.67245 9.03614
94 4LYA ATP 0.0000542 0.52554 9.03614
95 1OYY AGS 0.002857 0.4472 9.03614
96 1JJV ATP 0.00001079 0.58944 9.63855
97 2OFW ADX 0.000718 0.45063 9.63855
98 3UIE ANP 0.00005422 0.42589 9.63855
99 5M7P ADP 0.0005759 0.41127 9.63855
100 3WY9 GDP 0.0000000001278 0.82453 9.83607
101 3WYA GDP 0.0000000004151 0.56519 9.83607
102 4JLV ADP 0.000131 0.52008 9.83607
103 4R43 GDP 0.0002201 0.50223 9.83607
104 4IOK ADP 0.003976 0.43534 9.83607
105 1X6V ADP 0.0008532 0.43521 9.83607
106 4IOK XPO 0.003803 0.43148 9.83607
107 2J5V PCA 0.03135 0.4228 9.83607
108 4OI4 ATP 0.001183 0.41463 9.83607
109 5E5U MLI 0.02983 0.40127 9.83607
110 2C78 GNP 0.0000000006554 0.64391 10.241
111 2C77 GNP 0.000000001128 0.62584 10.241
112 3EWA ANP 0.00006753 0.52758 10.241
113 1IHU AF3 0.00008995 0.4825 10.241
114 1IHU ADP 0.00009497 0.47696 10.241
115 5IFS ADP 0.000132 0.41324 10.241
116 1BG2 ADP 0.0000009084 0.40644 10.241
117 5DG2 GAL GLC 0.01535 0.42792 10.3704
118 1QHH ATP 0.01192 0.41245 10.4348
119 2BEK ATP 0.001258 0.43916 10.8434
120 1Y63 ADP 0.00001511 0.42853 10.8434
121 2WIC GNP 0.01746 0.40312 10.8434
122 2WJG GDP 0.00000001365 0.71009 11.4458
123 5GOE GDP 0.000000006253 0.70474 11.4458
124 2XTZ GSP 0.00000001458 0.62101 11.4458
125 2WJH GDP 0.0000000187 0.54085 11.4458
126 3EZ2 ADP 0.00007368 0.53274 11.4458
127 2WJH FLC 0.000002844 0.4756 11.4458
128 1PQ7 ARG 0.01263 0.40391 11.4458
129 5L3V GDP 0.000002083 0.58586 11.4754
130 4AG5 ADP 0.00001672 0.57996 11.4754
131 1FQK GDP 0.0000006118 0.56802 11.4754
132 1FQJ GDP 0.0000003454 0.55246 11.4754
133 3TK1 GDP 0.0000000004284 0.54047 11.4754
134 3B9Q MLI 0.00007635 0.5404 11.4754
135 4PX9 ADP 0.0001232 0.52143 11.4754
136 1ION ADP 0.00004951 0.52102 11.4754
137 1FQK ALF 0.0006237 0.49917 11.4754
138 2FAH GDP 0.0001659 0.49074 11.4754
139 5MZN ADP 0.0008692 0.48453 11.4754
140 2FNA ADP 0.0001598 0.47192 11.4754
141 4KBF AMP 0.001266 0.47017 11.4754
142 5K5Z ANP 0.0001927 0.46007 11.4754
143 2XAU ADP 0.001133 0.45694 11.4754
144 4PFO ADP 0.000569 0.4373 11.4754
145 2GWH A3P 0.004515 0.42077 11.4754
146 2VB6 ADP BEF 0.001324 0.4128 11.4754
147 1APZ ASP 0.02722 0.40647 11.4754
148 3FYH ADP 0.002701 0.40531 11.4754
149 2GDJ ANP 0.0000974 0.40332 11.4754
150 4NON GDP 0.0000002388 0.57731 12.0482
151 1F5N GNP 0.00006855 0.46692 12.0482
152 4J0Q GDP 0.0000000004007 0.55276 12.6506
153 1IWE IMP 0.0008789 0.48547 12.6506
154 3DZD ADP 0.000437 0.47136 12.6506
155 5G41 AP5 0.00496 0.42118 12.6506
156 3VMF GTP 0.000000005779 0.63709 13.1148
157 1LVG ADP 0.000001232 0.63262 13.1148
158 4ZKD GDP 0.00000001005 0.63026 13.1148
159 3WXM GTP 0.000000009031 0.62934 13.1148
160 2ODE ALF GDP 0.0000000661 0.60229 13.1148
161 5M04 GDP 0.0000000004772 0.55464 13.1148
162 1SKQ GDP 0.000000005951 0.52548 13.1148
163 1SQ5 ADP 0.00008034 0.51729 13.1148
164 4XGU ADP 0.0002092 0.48097 13.1148
165 1YTM ATP 0.0002768 0.46616 13.1148
166 3QKT ANP 0.0007692 0.43556 13.1148
167 4P32 ADP 0.001941 0.42595 13.1148
168 4RPL FAD 0.02079 0.40705 13.1148
169 5HR5 ADP 0.0006075 0.40366 13.1148
170 4RPL 3UC 0.03144 0.40058 13.1148
171 5WRJ A3P 0.003825 0.40037 13.1148
172 5J1S ATP 0.001753 0.42096 13.253
173 1ZIN AP5 0.004257 0.41906 13.253
174 1JJ7 ADP 0.000001396 0.65437 13.8554
175 3B5J 12D 0.00004299 0.55242 13.8554
176 4YMU ATP 0.00006636 0.53504 13.8554
177 1XX6 ADP 0.0002189 0.52228 13.8554
178 2C04 GCP 0.00002599 0.5218 13.8554
179 2IXE ATP 0.0005303 0.42237 13.8554
180 1RJ9 GCP 0.00002632 0.40232 13.8554
181 1V8K ANP 0.000006696 0.57717 14.4578
182 5L3R GCP 0.0000006111 0.56195 14.4578
183 3PQC GDP 0.00000002997 0.53401 14.4578
184 4QM7 GTP 0.0001471 0.51087 14.4578
185 3U6B GDP 0.00000000008266 0.83412 14.7541
186 2HCJ GDP 0.00000000009888 0.83018 14.7541
187 2VVG ADP 0.0000003378 0.68248 14.7541
188 2CBZ ATP 0.0000006495 0.67564 14.7541
189 2BVN GNP 0.0000000000271 0.64297 14.7541
190 1G7C 5GP 0.000001059 0.61673 14.7541
191 3E70 GDP 0.000004455 0.57787 14.7541
192 1D8T GDP 0.0000000002185 0.57052 14.7541
193 5JBQ GDP 0.0000000002849 0.56766 14.7541
194 4P3Y GDP 0.00000000009351 0.56694 14.7541
195 4G5G GDP 0.0000000003545 0.56547 14.7541
196 1YQT ADP 0.00003482 0.56328 14.7541
197 3U6K GDP 0.000000000551 0.56176 14.7541
198 4D81 ADP 0.0002415 0.48323 14.7541
199 2QEN ADP 0.00005313 0.44267 14.7541
200 4V03 ADP 0.00002946 0.43607 14.7541
201 5H67 ATP 0.005331 0.42937 14.7541
202 1S5P LYS GLY GLY ALA ALY ARG HIS ARG 0.003291 0.42698 14.7541
203 5IRN ADP 0.0000957 0.42528 14.7541
204 2YMZ LAT 0.01894 0.41961 14.7541
205 1NST A3P 0.006649 0.41317 14.7541
206 4KFU ACP 0.00002268 0.40208 15.0602
207 4NCN GTP 0.0000000002544 0.70854 15.6627
208 4TMZ GSP 0.0000000002678 0.66883 15.6627
209 3CX8 GSP 0.0000000497 0.60732 15.6627
210 1ZCB GDP 0.000001115 0.54566 15.6627
211 3ZIA ADP 0.0001568 0.41832 15.6627
212 3ZIA ATP 0.000064 0.41784 15.6627
213 1MKY GDP 0.00000000008621 0.81876 16.2651
214 2IYL GDP 0.000005142 0.45543 16.2651
215 4RD0 GDP 0.0000000004382 0.6504 16.3934
216 1GOT GDP 0.0000007319 0.53354 16.3934
217 3WV6 GAL GLC 0.0173 0.42261 16.3934
218 3A4M ADP 0.000004417 0.42214 16.3934
219 5HCN GCP 0.0000000005176 0.76765 16.8675
220 5EE5 GTP 0.0000000001516 0.66848 16.8675
221 4HI0 GDP 0.000000312 0.53717 16.8675
222 4BAS GNP 0.00000002217 0.5887 17.4699
223 5X40 ACP 0.001185 0.41471 17.4699
224 1GOJ ADP 0.0000003007 0.6867 18.0328
225 1D2E GDP 0.00000001053 0.68417 18.0328
226 4CVN ADP 0.00001025 0.5848 18.0328
227 3AB3 GDP 0.0000001103 0.5567 18.0328
228 1JWY GDP 0.000001019 0.49848 18.0328
229 4IDN GNP 0.0002279 0.46539 18.0328
230 1L2T ATP 0.0006311 0.43053 18.0328
231 1JWY ADP 0.0001077 0.40744 18.0328
232 1PUJ GNP 0.000000001926 0.71815 18.0723
233 4HSE ADP 0.00003427 0.42193 18.0723
234 1NY5 ADP 0.0006229 0.4596 18.6747
235 3QF7 ANP 0.0006737 0.45366 18.6747
236 2X77 GDP 0.000000000423 0.77188 19.2771
237 4BQS ADP 0.00005395 0.5324 19.2771
238 3Q9L ATP 0.00001895 0.52799 19.6721
239 3CNL GNP 0.000000004185 0.52477 19.6721
240 4H1V GNP 0.0000048 0.48296 19.6721
241 5N69 ADP 0.0002591 0.48182 19.6721
242 4LJ9 ACP 0.0007089 0.47713 19.6721
243 1XKV ATP 0.0004516 0.47577 19.6721
244 3QDK QDK 0.03489 0.40807 19.6721
245 1P9B GDP 0.009562 0.40512 19.6721
246 4FCW ADP 0.0003101 0.40089 19.6721
247 2IS6 ADP 0.00008796 0.40162 19.8795
248 3W5J GDP 0.000001323 0.63747 20.4819
249 5CK5 GDP 0.0000000004508 0.55655 21.0843
250 1GP2 GDP 0.00000125 0.55513 21.3115
251 5L3S GNP 0.000003921 0.51734 21.3115
252 5L3W GDP 0.00001405 0.45426 21.3115
253 5H56 TYD 0.002127 0.42053 21.3115
254 5H56 ADP 0.002127 0.42053 21.3115
255 1OS1 PYR 0.002888 0.4151 21.3115
256 1OS1 ATP 0.002663 0.4151 21.3115
257 4PPF FLC 0.000007603 0.6021 21.6867
258 1D2N ANP 0.002024 0.42878 21.6867
259 2CHG ANP 0.0002272 0.41943 21.6867
260 2FH5 GTP 0.00000000007069 0.75126 22.8916
261 3T1O GDP 0.0000001821 0.63573 22.8916
262 3T12 GDP ALF 0.00000006791 0.57165 22.8916
263 3DEF GDP 0.000002006 0.4852 22.8916
264 3ZFD ANP 0.000003051 0.57805 22.9508
265 5IRR GSP 0.00000102 0.56496 22.9508
266 4ZG4 VO4 ADP 0.0000758 0.46093 22.9508
267 4A4Z ANP 0.003929 0.44035 22.9508
268 3KTA AP5 0.0001879 0.41371 22.9508
269 5MVR ADP 0.00004397 0.41328 22.9508
270 3RLF ANP 0.0002415 0.44137 24.0964
271 4PC3 GDP 0.00000002009 0.67123 24.5902
272 3H4S ADP 0.00000136 0.64564 24.5902
273 1KK1 GNP 0.000000001257 0.54196 24.5902
274 4FRZ ADP 0.000005076 0.41394 24.5902
275 1W0J ADP 0.000125 0.49641 25.3012
276 1W0J ADP BEF 0.0004143 0.46298 25.3012
277 3VX3 ADP 0.0002587 0.42713 25.3012
278 5FG3 GDP 0.0000000000751 0.57189 25.9036
279 1B7T ADP 0.0003225 0.48266 26.2295
280 1KK8 BEF ADP 0.0004573 0.46565 26.2295
281 1G7S GDP 0.00000000234 0.73606 26.506
282 1DAR GDP 0.0000000122 0.7125 27.1084
283 3KJI ADP 0.007525 0.40751 27.7108
284 4B47 GDP 0.00000000007174 0.83724 28.3133
285 1YRB GDP 0.0000000002174 0.61134 28.3133
286 1NRJ GTP 0.000000009872 0.6585 28.481
287 4KAX GTP 0.000000001407 0.68619 28.9157
288 2CK3 ADP 0.0005949 0.42641 29.5082
289 2V7Q ATP 0.0001118 0.41807 29.5082
290 2CK3 ANP 0.0004032 0.41607 29.5082
291 2V7Q ADP 0.00004865 0.41223 29.5082
292 4M9Q GNP 0.0000000008656 0.69513 29.5181
293 3PCR GTP 0.00000002016 0.62961 29.6296
294 2W83 GTP 0.000000003293 0.6292 29.697
295 2A5F GTP 0.00000000895 0.63674 30.1205
296 1WF3 GNP 0.000000006003 0.62385 30.1205
297 1W5T ANP 0.001113 0.40614 30.1205
298 3N5C GDP 0.0000000006229 0.77633 30.2469
299 3DOE GTP 0.000000001573 0.67565 31.3253
300 1KSH GDP 0.0000000003429 0.64348 31.3253
301 4DCT GDP 0.0000000002426 0.78352 32.5301
302 1R6B ADP 0.0001139 0.50998 32.7869
303 1FNN ADP 0.000444 0.41543 32.7869
304 5KSP GDP 0.00000004641 0.67348 33.1325
305 1J2J GTP 0.000000002708 0.66585 33.1325
306 5KSZ GCP 0.0000001379 0.64143 33.1325
307 2J59 GTP 0.000000003381 0.62862 33.1325
308 1O3Y GTP 0.000000005059 0.62232 33.1325
309 1MR3 G3D 0.000000001019 0.57102 33.1325
310 2QN6 GDP 0.0000000004262 0.79804 33.3333
311 1ZD9 GDP 0.0000000007976 0.62312 33.7349
312 5KUT GDP 0.000000001415 0.56247 33.7349
313 1S9D GDP 0.000000002323 0.73621 34.1463
314 1RE0 GDP 0.0000000001906 0.5623 34.1463
315 1YZG GDP 0.000000001168 0.75061 34.3373
316 4YLG GDP 0.00000000123 0.60155 34.3373
317 3AQ4 GDP 0.000000001452 0.56486 34.3373
318 1ZJ6 G3D 0.0000000009953 0.75396 34.9398
319 5KDO GDP 0.0000007279 0.57773 37.8378
320 2ZEJ GDP 0.0000008707 0.53998 39.1566
321 3A1S GDP 0.0000001065 0.51775 39.1566
322 1WDT GTP 0.0000001425 0.61587 40.3614
323 1F6B GDP 0.000000004451 0.5558 40.3614
324 1FZQ GDP 0.0000000002834 0.79322 40.9639
325 4ZI2 GNP 0.0000000004238 0.70828 40.9639
326 4GOJ GNP 0.0000000004763 0.70613 40.9639
327 2QTV GNP 0.00000002013 0.62238 41.5663
328 2GJ8 ALF GDP 0.000000001089 0.65228 42.1687
329 5LB3 ADP 0.0001757 0.51362 42.623
330 5DI3 GNP 0.000000001407 0.68619 42.7711
331 1M2O GNP 0.00000001714 0.6182 42.7711
332 1R4A GNP 0.0000000004446 0.6899 44.2424
333 1M7B GTP 0.0000000005236 0.71366 45.7831
334 1GWN GTP 0.0000000007097 0.63547 45.7831
335 1SVI GDP 0.0000000004288 0.79791 46.3855
336 3GJ7 GDP 0.0000000001464 0.8074 47.5904
337 3GJ8 GDP 0.0000000003476 0.77599 47.5904
338 3GJ5 GDP 0.0000000003817 0.77404 47.5904
339 3GJX GTP 0.0000000001439 0.70445 47.5904
340 3M1I GTP 0.00000000006647 0.70001 47.5904
341 3WYF GTP 0.00000000008645 0.68242 47.5904
342 3WYG GTP 0.000000000177 0.67043 47.5904
343 3GJ4 GDP 0.000000000167 0.58051 47.5904
344 3GJ0 GDP 0.0000000001413 0.80817 48.1928
345 3GJ3 GDP 0.0000000001811 0.80283 48.1928
346 5UWP GNP 0.00000000004842 0.72664 48.1928
347 4HAT GNP 0.00000000005114 0.72569 48.1928
348 5UWR GNP 0.00000000004787 0.72368 48.1928
349 5UWI GNP 0.00000000005014 0.72287 48.1928
350 5UWT GNP 0.00000000005432 0.72147 48.1928
351 1IBR GNP 0.00000000006291 0.71891 48.1928
352 5UWQ GNP 0.00000000004323 0.70709 48.1928
353 5UWW GNP 0.00000000004524 0.70635 48.1928
354 5DHF GNP 0.00000000004646 0.70591 48.1928
355 5UWJ GNP 0.00000000004931 0.70492 48.1928
356 5UWO GNP 0.00000000005005 0.70467 48.1928
357 5UWU GNP 0.00000000005083 0.70442 48.1928
358 5UWH GNP 0.00000000005954 0.7018 48.1928
359 3REF GDP 0.000000001219 0.68883 48.1928
360 5UWS GNP 0.00000000006635 0.68611 48.1928
361 5DI9 GNP 0.00000000006735 0.68588 48.1928
362 1WA5 GTP 0.0000000001097 0.64165 48.1928
363 5BXQ GDP 0.0000000002309 0.58726 48.1928
364 3RAB GNP 0.00000000001272 0.74342 48.7952
365 4DKX GDP 0.0000000000009956 0.91448 49.3976
366 2EW1 GNP 0.000000000008632 0.72651 49.3976
367 2W2X GSP 0.00000000002589 0.77012 50
368 1Z0J GTP 0.000000000005028 0.76305 50
369 1YZQ GNP 0.00000000000985 0.73147 50
370 1NF3 GNP 0.000000001168 0.66488 50
Pocket No.: 2; Query (leader) PDB : 5UFQ; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 5ufq.bio3) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 5UFQ; Ligand: GNP; Similar sites found: 28
This union binding pocket(no: 3) in the query (biounit: 5ufq.bio1) has 23 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1MAI I3P 0.03203 0.40585 None
2 4TTQ ATP 0.0001768 0.42006 3.61446
3 2XWL CTP 0.005965 0.41034 4.21687
4 1AQU A3P 0.002687 0.40013 4.21687
5 3B7G ANP 0.0006214 0.40685 4.81928
6 4QRH 0O2 0.001444 0.4199 5.42169
7 1T5C ADP 0.000003086 0.41685 5.42169
8 1G6H ADP 0.000002533 0.41693 6.0241
9 2OZE AGS 0.008283 0.4182 6.55738
10 2WHX ADP 0.00001662 0.4174 7.83133
11 3FKQ ATP 0.006036 0.42246 8.19672
12 5LTJ ADP 0.000286 0.41569 8.19672
13 1MUU SUC 0.008817 0.42683 9.83607
14 4TM3 FAD 0.04343 0.40141 9.83607
15 1FQJ ALF 0.00007961 0.40116 11.4754
16 4RLQ 3SK 0.0288 0.4007 11.4754
17 2DFV NAD 0.009866 0.40023 11.4754
18 1SVM ATP 0.009454 0.41918 13.1148
19 5WRI A3P 0.003411 0.41042 13.1148
20 4U00 ADP 0.00001052 0.40323 13.8554
21 1P4V GLY 0.02901 0.40149 14.4578
22 3DKP ADP 0.0001558 0.41935 14.7541
23 3NHB ADP 0.00002618 0.41493 14.7541
24 2AWN ADP 0.0000007931 0.4143 16.2651
25 2ZR9 DTP 0.0001876 0.41666 21.6867
26 2Z5F A3P 0.003506 0.40547 22.9508
27 1W5T ADP 0.001502 0.40874 30.1205
28 2D7D ADP 0.0005053 0.40366 36.1446
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