Receptor
PDB id Resolution Class Description Source Keywords
5b0r 1.8 Å NON-ENZYME: OTHER BETA-1,2-MANNOBIOSE PHOSPHORYLASE FROM LISTERIA INNOCUA - BE MANNOBIOSE COMPLEX LISTERIA INNOCUA CLIP11262 GLYCOSIDE PHOSPHORYLASE TRANSFERASE
Ref.: CHARACTERIZATION AND CRYSTAL STRUCTURE DETERMINATIO BETA-1,2-MANNOBIOSE PHOSPHORYLASE FROM LISTERIA INN FEBS LETT. V. 589 3816 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 B:507;
A:506;
B:505;
B:504;
B:506;
B:508;
A:505;
A:504;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
none;
none;
none;
 submit data
96.063 O4 S [O-]S...
BMA BMA C:1;
D:1;
 Valid;
Valid;
 none;
none;
 submit data
n/a n/a
GOL B:509;
A:507;
B:510;
A:508;
 Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
 submit data
92.094 C3 H8 O3 C(C(C...
MES B:511;
A:509;
 Invalid;
Invalid;
 none;
none;
 submit data
195.237 C6 H13 N O4 S C1COC...
MAN BMA D:1;
C:1;
 Valid;
Valid;
 none;
none;
 submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5B0R 1.8 Å NON-ENZYME: OTHER BETA-1,2-MANNOBIOSE PHOSPHORYLASE FROM LISTERIA INNOCUA - BE MANNOBIOSE COMPLEX LISTERIA INNOCUA CLIP11262 GLYCOSIDE PHOSPHORYLASE TRANSFERASE
Ref.: CHARACTERIZATION AND CRYSTAL STRUCTURE DETERMINATIO BETA-1,2-MANNOBIOSE PHOSPHORYLASE FROM LISTERIA INN FEBS LETT. V. 589 3816 2015
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1610 families.
1 5B0R - BMA BMA n/a n/a
2 5B0Q - MAN C6 H12 O6 C([C@@H]1[....
3 5B0S - MAN BMA BMA n/a n/a
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1331 families.
1 5B0R - BMA BMA n/a n/a
2 5B0Q - MAN C6 H12 O6 C([C@@H]1[....
3 5B0S - MAN BMA BMA n/a n/a
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1144 families.
1 5B0R - BMA BMA n/a n/a
2 5B0Q - MAN C6 H12 O6 C([C@@H]1[....
3 5B0S - MAN BMA BMA n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: BMA BMA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Ligand no: 2; Ligand: MAN BMA; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: BMA BMA; Similar ligands found: 82
No: Ligand Similarity coefficient
1 BMA BMA 1.0000
2 MAN BMA 0.9876
3 BGC BMA 0.9658
4 BMA IFM 0.9657
5 IFM BMA 0.9657
6 BMA BGC 0.9626
7 FRU BMA 0.9569
8 BEM BEM 0.9528
9 BGC BGC 0.9513
10 BEM LGU 0.9450
11 IFM BGC 0.9443
12 GLC BGC 0.9437
13 SHG BGC 0.9416
14 GCS GCS 0.9399
15 ABL 0.9388
16 BMA GAL 0.9343
17 9MR 0.9319
18 PA1 GCS 0.9294
19 MVL BMA 0.9274
20 BMA MVL 0.9267
21 NOY BGC 0.9240
22 BGC GAL 0.9237
23 SGC BGC 0.9231
24 BGC OXZ 0.9204
25 MAV BEM 0.9193
26 LGU MAW 0.9176
27 MGL SGC 0.9175
28 GLC GLC 0.9164
29 GLC GAL 0.9105
30 BGC Z9D 0.9105
31 MGL GAL 0.9065
32 MYG 0.8955
33 FRU GAL 0.8943
34 IDC 0.8921
35 GLA GLA 0.8893
36 BGC GLC 0.8892
37 RR7 GLC 0.8853
38 XMM 0.8836
39 ISX 0.8834
40 6EN 0.8818
41 BNY 0.8785
42 ADN 0.8761
43 GLO BGC 0.8752
44 CZ0 0.8745
45 SGC GLC 0.8711
46 7D1 MAN 0.8709
47 GCU BGC 0.8706
48 UL1 0.8697
49 TBN 0.8683
50 FMB 0.8681
51 GAL FUC 0.8677
52 XYA 0.8666
53 NAB 0.8660
54 NFG 0.8651
55 AFX 0.8625
56 XYP XYP 0.8624
57 MA1 GLC 0.8615
58 MAN MNM 0.8613
59 FM1 0.8613
60 MAN IFM 0.8607
61 GLC IFM 0.8607
62 JRO 0.8606
63 MTA 0.8605
64 LUM 0.8603
65 RAB 0.8602
66 NOS 0.8598
67 GAL GLA 0.8598
68 NGA GAL 0.8588
69 FMC 0.8581
70 113 0.8573
71 GAT 0.8572
72 PNA 0.8570
73 GAL NGT 0.8554
74 GAL GC2 0.8552
75 UAY 0.8540
76 XYS XYS 0.8540
77 SGP 0.8535
78 IMH 0.8522
79 9CE 0.8519
80 RZM 0.8517
81 5ID 0.8507
82 TAL 0.8505
Ligand no: 2; Ligand: MAN BMA; Similar ligands found: 47
No: Ligand Similarity coefficient
1 MAN BMA 1.0000
2 BMA BMA 0.9876
3 BMA IFM 0.9593
4 IFM BMA 0.9439
5 MAV BEM 0.9388
6 PA1 GCS 0.9386
7 BEM BEM 0.9366
8 BGC BGC 0.9334
9 IFM BGC 0.9300
10 9MR 0.9201
11 GLC BGC 0.9187
12 BGC OXZ 0.9186
13 BEM LGU 0.9185
14 BMA BGC 0.9179
15 GLC GAL 0.9167
16 ABL 0.9153
17 MVL BMA 0.9124
18 BMA MVL 0.9124
19 NOY BGC 0.9110
20 BGC GAL 0.9092
21 SHG BGC 0.9068
22 BGC Z9D 0.9066
23 GLC GLC 0.9057
24 GCS GCS 0.9047
25 LGU MAW 0.8952
26 SGC BGC 0.8928
27 BMA GAL 0.8892
28 6EN 0.8835
29 MYG 0.8808
30 FRU GAL 0.8796
31 MGL SGC 0.8758
32 CJZ 0.8749
33 ISX 0.8720
34 GLO BGC 0.8695
35 XMM 0.8695
36 BQZ 0.8683
37 GLA GLA 0.8653
38 MGL GAL 0.8644
39 7D0 0.8639
40 FUC GAL 0.8629
41 GAL AAL 0.8623
42 MHD GAL 0.8594
43 TWJ SDY 0.8592
44 GMP 0.8578
45 MMA XYP 0.8577
46 GCU BGC 0.8543
47 CZ0 0.8540
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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