Receptor
PDB id Resolution Class Description Source Keywords
5diy 2.06 Å EC: 2.-.-.- THERMOBACULUM TERRENUM O-GLCNAC HYDROLASE MUTANT - D120N HOMO SAPIENS GH84 OGA O-GLCNAC HYDROLASE O-GLCNACASE HYDROLASE
Ref.: EVIDENCE FOR A FUNCTIONAL O-LINKED N-ACETYLGLUCOSAM (O-GLCNAC) SYSTEM IN THE THERMOPHILIC BACTERIUM THERMOBACULUM TERRENUM. J.BIOL.CHEM. V. 290 30291 2015
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
VAL PRO TYR SER SER ALA GLN NAG P:1;
Q:1;
 Valid;
Valid;
 Atoms found LESS than expected: % Diff = 0.224;
Atoms found LESS than expected: % Diff = 0.224;
 submit data
739.8 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5DIY 2.06 Å EC: 2.-.-.- THERMOBACULUM TERRENUM O-GLCNAC HYDROLASE MUTANT - D120N HOMO SAPIENS GH84 OGA O-GLCNAC HYDROLASE O-GLCNACASE HYDROLASE
Ref.: EVIDENCE FOR A FUNCTIONAL O-LINKED N-ACETYLGLUCOSAM (O-GLCNAC) SYSTEM IN THE THERMOPHILIC BACTERIUM THERMOBACULUM TERRENUM. J.BIOL.CHEM. V. 290 30291 2015
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 313 families.
1 5DIY - VAL PRO TYR SER SER ALA GLN NAG n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 277 families.
1 5DIY - VAL PRO TYR SER SER ALA GLN NAG n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 212 families.
1 5DIY - VAL PRO TYR SER SER ALA GLN NAG n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: VAL PRO TYR SER SER ALA GLN NAG; Similar ligands found: 16
No: Ligand ECFP6 Tc MDL keys Tc
1 VAL PRO TYR SER SER ALA GLN NAG 1 1
2 ARG ILE PRO SER TYR ARG TYR ARG TYR 0.446667 0.78481
3 TYR PRO PHE PHE NH2 0.445312 0.746479
4 GLN VAL PRO SER ASP PRO TYR ASN TYR 0.443709 0.901408
5 TYR TYR SER ILE ALA PRO HIS SER ILE 0.436709 0.805195
6 TYR PRO TYR ASP VAL PRO ASP TYR ALA 0.434483 0.859155
7 ACE SER SER VAL GLY A2G 0.430769 0.732394
8 TYR PRO SER LYS PRO ASP ASN PRO GLY GLU 0.424242 0.828571
9 ACA SER SER VAL GLY A2G 0.41844 0.828571
10 GLY THR LYS PRO PRO LEU GLU GLU LEU A2G 0.416149 0.943662
11 ARG VAL SER PRO SER THR SER TYR THR PRO 0.415493 0.857143
12 PHE ALA PRO GLY PHE PHE PRO TYR LEU 0.411392 0.821918
13 TYR TYR SER ILE ILE PRO HIS SER ILE 0.411392 0.828947
14 PIV HIS PRO PHE HIS LPL TYR TYR SER 0.409357 0.75641
15 N7P THR SEP PRO SER TYR SET 0.401316 0.794872
16 SER ILE TYR PHE TPO PRO GLU LEU TYR ASP 0.4 0.822785
Similar Ligands (3D)
Ligand no: 1; Ligand: VAL PRO TYR SER SER ALA GLN NAG; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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