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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
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- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 1 families. | |||||
1 | 5M03 | - | MAN MAN | n/a | n/a |
2 | 6HMH | - | GDQ GLC | n/a | n/a |
3 | 5MC8 | - | DGO MAN | n/a | n/a |
4 | 6HMG | - | GDQ GLC | n/a | n/a |
5 | 6FAR | - | MAN MVL | n/a | n/a |
6 | 5LYR | Kd = 0.013 uM | MAN MNM | n/a | n/a |
7 | 4AD5 | - | MAN MAN | n/a | n/a |
8 | 4V27 | Kd = 217 nM | MAN IFM | n/a | n/a |
9 | 5M5D | Kd = 111 uM | DGO MAN | n/a | n/a |
10 | 5M3W | - | 7D1 MAN | n/a | n/a |
11 | 4AD2 | Kd = 625 nM | GLC IFM | n/a | n/a |
12 | 4AD3 | Kd = 24 uM | GLC DMJ | n/a | n/a |
13 | 5M17 | Kd = 221 uM | 7D1 MAN | n/a | n/a |
14 | 6FAM | - | MAN G63 | n/a | n/a |
15 | 4V28 | - | MAN 4MU MAN | n/a | n/a |
16 | 4AD4 | - | MAN MAN | n/a | n/a |
17 | 5MEL | - | GLC 7LQ | n/a | n/a |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 1 families. | |||||
1 | 5M03 | - | MAN MAN | n/a | n/a |
2 | 6HMH | - | GDQ GLC | n/a | n/a |
3 | 5MC8 | - | DGO MAN | n/a | n/a |
4 | 6HMG | - | GDQ GLC | n/a | n/a |
5 | 6FAR | - | MAN MVL | n/a | n/a |
6 | 5LYR | Kd = 0.013 uM | MAN MNM | n/a | n/a |
7 | 4AD5 | - | MAN MAN | n/a | n/a |
8 | 4V27 | Kd = 217 nM | MAN IFM | n/a | n/a |
9 | 5M5D | Kd = 111 uM | DGO MAN | n/a | n/a |
10 | 5M3W | - | 7D1 MAN | n/a | n/a |
11 | 4AD2 | Kd = 625 nM | GLC IFM | n/a | n/a |
12 | 4AD3 | Kd = 24 uM | GLC DMJ | n/a | n/a |
13 | 5M17 | Kd = 221 uM | 7D1 MAN | n/a | n/a |
14 | 6FAM | - | MAN G63 | n/a | n/a |
15 | 4V28 | - | MAN 4MU MAN | n/a | n/a |
16 | 4AD4 | - | MAN MAN | n/a | n/a |
17 | 5MEL | - | GLC 7LQ | n/a | n/a |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | DGO MAN | 1 | 1 |
2 | GLC 7LQ | 0.52459 | 0.970588 |
3 | BQZ | 0.490566 | 0.882353 |
4 | DGO Z61 | 0.483871 | 0.944444 |
5 | MBG GLA | 0.473684 | 0.864865 |
6 | BGC GLA GAL | 0.448276 | 0.914286 |
7 | GAL GLA | 0.440678 | 0.914286 |
8 | MGL GAL | 0.42623 | 0.864865 |
9 | MBG GAL | 0.42623 | 0.864865 |
10 | RZM | 0.42623 | 0.673913 |
11 | RR7 GLC | 0.419355 | 0.864865 |
12 | FUC GAL | 0.412698 | 0.861111 |
13 | MAN BMA BMA BMA BMA BMA BMA | 0.412698 | 0.914286 |
14 | GLC GLC GLC GLC BGC GLC GLC | 0.412698 | 0.914286 |
15 | BGC BGC BGC BGC BGC BGC BGC BGC BGC | 0.412698 | 0.914286 |
16 | MAN MAN | 0.409836 | 0.914286 |
17 | GCU BGC | 0.409091 | 0.837838 |
18 | 5QP | 0.40625 | 0.861111 |
19 | BGC BGC BGC BGC BGC BGC | 0.40625 | 0.914286 |
20 | GLC BGC BGC BGC | 0.40625 | 0.914286 |
21 | BGC BGC BGC BGC BGC BGC BGC | 0.40625 | 0.914286 |
22 | BGC BGC BGC | 0.40625 | 0.914286 |
23 | FRU BMA | 0.40625 | 0.775 |
24 | MAN IPD MAN | 0.40625 | 0.767442 |
25 | BGC BGC BGC BGC BGC | 0.40625 | 0.914286 |
26 | ISX | 0.4 | 0.744186 |
27 | GLC EDO GLC | 0.4 | 0.864865 |
28 | 9MR | 0.4 | 0.727273 |
29 | IFM BGC | 0.4 | 0.695652 |
30 | IPD MAN | 0.4 | 0.72093 |
31 | BGC OXZ | 0.4 | 0.653061 |
No: | Ligand | Similarity coefficient |
---|---|---|
1 | 7D1 MAN | 0.9990 |
2 | MAN IFM | 0.9921 |
3 | GLC IFM | 0.9757 |
4 | MAN MNM | 0.9715 |
5 | MAN G63 | 0.9704 |
6 | GDQ GLC | 0.9501 |
7 | GLC DMJ | 0.9476 |
8 | GLC GLC | 0.9332 |
9 | MAN GLC | 0.9298 |
10 | BGC GLC | 0.9279 |
11 | XMM | 0.9183 |
12 | ZEL MAN | 0.9161 |
13 | NOJ GLC | 0.9075 |
14 | MMA MAN | 0.9074 |
15 | SER MAN | 0.9036 |
16 | GLA BEZ | 0.9035 |
17 | FRU GLC | 0.8963 |
18 | GLC BGC | 0.8948 |
19 | DMJ MAN | 0.8918 |
20 | XYP XDN | 0.8861 |
21 | XYA | 0.8853 |
22 | MTP | 0.8820 |
23 | XYP GCU | 0.8815 |
24 | 2M8 | 0.8788 |
25 | NOS | 0.8787 |
26 | MYG | 0.8751 |
27 | BGC GLA | 0.8747 |
28 | ADN | 0.8744 |
29 | GLC GLA | 0.8741 |
30 | 1DA | 0.8715 |
31 | MBE | 0.8698 |
32 | FMB | 0.8696 |
33 | M3N | 0.8686 |
34 | XYP XYS | 0.8684 |
35 | 5AD | 0.8680 |
36 | A | 0.8677 |
37 | 26A | 0.8651 |
38 | XYS XYS | 0.8608 |
39 | SNI | 0.8593 |
This union binding pocket(no: 1) in the query (biounit: 5lyr.bio1) has 30 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |