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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
- Family 90% : .ZIP | .CSV
- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 20 families. | |||||
1 | 2WM0 | Ki = 0.25 uM | NAG NGT NAG | n/a | n/a |
2 | 5Z7O | - | NAG NAG NAG NAG | n/a | n/a |
3 | 1NH6 | - | NAG NAG NAG NAG NAG NAG | n/a | n/a |
4 | 2WLZ | - | NGT NAG | n/a | n/a |
5 | 2WLY | Ki = 30 uM | SN5 NGT | n/a | n/a |
6 | 5Z7P | - | NAG NAG NAG | n/a | n/a |
7 | 1K9T | - | NAG NAG NAG NAG | n/a | n/a |
8 | 1EIB | - | NAG NAG NAG NAG NAG NAG NAG NAG | n/a | n/a |
9 | 5Z7N | - | NDG NAG NAG NAG NAG | n/a | n/a |
10 | 1FFR | - | NAG NAG NAG NAG NAG NAG NAG | n/a | n/a |
11 | 1X6N | - | AO3 | C25 H42 N4 O14 | CC(=O)N[C@.... |
12 | 5Z7M | - | NDG NAG NAG NAG NAG NAG | n/a | n/a |
13 | 1EHN | - | NAG NAG NAG NAG NAG NAG NAG NAG | n/a | n/a |
14 | 1FFQ | - | NAA AMI NAA | n/a | n/a |
15 | 2WK2 | Ki = 0.15 uM | SN5 NGT SN5 | n/a | n/a |
16 | 6JMN | Kd = 0.085 uM | BV0 | C24 H25 N6 O3 | CC1=CC=CN2.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 11 families. | |||||
1 | 2WM0 | Ki = 0.25 uM | NAG NGT NAG | n/a | n/a |
2 | 5Z7O | - | NAG NAG NAG NAG | n/a | n/a |
3 | 1NH6 | - | NAG NAG NAG NAG NAG NAG | n/a | n/a |
4 | 2WLZ | - | NGT NAG | n/a | n/a |
5 | 2WLY | Ki = 30 uM | SN5 NGT | n/a | n/a |
6 | 5Z7P | - | NAG NAG NAG | n/a | n/a |
7 | 1K9T | - | NAG NAG NAG NAG | n/a | n/a |
8 | 1EIB | - | NAG NAG NAG NAG NAG NAG NAG NAG | n/a | n/a |
9 | 5Z7N | - | NDG NAG NAG NAG NAG | n/a | n/a |
10 | 1FFR | - | NAG NAG NAG NAG NAG NAG NAG | n/a | n/a |
11 | 1X6N | - | AO3 | C25 H42 N4 O14 | CC(=O)N[C@.... |
12 | 5Z7M | - | NDG NAG NAG NAG NAG NAG | n/a | n/a |
13 | 1EHN | - | NAG NAG NAG NAG NAG NAG NAG NAG | n/a | n/a |
14 | 1FFQ | - | NAA AMI NAA | n/a | n/a |
15 | 2WK2 | Ki = 0.15 uM | SN5 NGT SN5 | n/a | n/a |
16 | 6JMN | Kd = 0.085 uM | BV0 | C24 H25 N6 O3 | CC1=CC=CN2.... |
17 | 3B9A | Kd = 0.09 uM | NAG NAG NAG NAG NAG NAG | n/a | n/a |
18 | 3B9D | - | NAG NAG NAG NAG | n/a | n/a |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | NAG NAG NAG | 1 | 1 |
2 | NAG NAG NAG NAG NAG NAG NAG | 1 | 1 |
3 | NAG NAG NAG NAG | 1 | 1 |
4 | NAG NAG BMA | 0.830986 | 0.981132 |
5 | NAG NAG BMA MAN | 0.7375 | 0.981132 |
6 | NAG NAG BMA BMA | 0.730769 | 0.981481 |
7 | NAG NAG BMA MAN MAN NAG NAG | 0.680851 | 1 |
8 | NAG NAG NAG NAG NAG NAG NAG NAG | 0.680556 | 0.924528 |
9 | NDG NAG NAG NAG NAG | 0.680556 | 0.924528 |
10 | NAG NAG NAG NAG NAG NAG | 0.680556 | 0.924528 |
11 | NAG NAG NAG NAG NAG | 0.680556 | 0.924528 |
12 | NAG BMA | 0.647887 | 0.90566 |
13 | NAG NOJ NAG | 0.62963 | 0.894737 |
14 | Z4S NAG NAG | 0.62963 | 0.859649 |
15 | NAG NOJ NAG NAG | 0.62963 | 0.912281 |
16 | GDL NAG | 0.625 | 0.90566 |
17 | NAG NAG BMA MAN MAN MAN MAN | 0.584158 | 0.981132 |
18 | MBG A2G | 0.573333 | 0.851852 |
19 | GAL NGA | 0.565789 | 0.867925 |
20 | NAG NGT NAG | 0.551724 | 0.777778 |
21 | BGC GAL NGA | 0.55 | 0.849057 |
22 | BMA MAN NAG | 0.548781 | 0.849057 |
23 | Z3Q NGA | 0.547619 | 0.777778 |
24 | GAL NAG GAL | 0.536585 | 0.849057 |
25 | AMV NAG AMU NAG | 0.533333 | 0.890909 |
26 | MAN NAG | 0.533333 | 0.849057 |
27 | NAG NAG BMA MAN NAG | 0.532609 | 0.924528 |
28 | 3QL | 0.530864 | 0.842105 |
29 | MAN NAG GAL | 0.52439 | 0.849057 |
30 | NAG GAL NAG | 0.52381 | 0.90566 |
31 | MAN MAN NAG | 0.52381 | 0.886792 |
32 | A2G NAG | 0.519481 | 0.90566 |
33 | NAG NAG NAG TMX | 0.517647 | 0.790323 |
34 | 6Y2 | 0.516854 | 0.720588 |
35 | NAA AMI NAA | 0.516129 | 0.710145 |
36 | AO3 | 0.516129 | 0.710145 |
37 | NAG NGO | 0.511905 | 0.79661 |
38 | NDG NAG | 0.506329 | 0.924528 |
39 | GAL NAG GAL NAG GAL | 0.505747 | 0.90566 |
40 | GAL NGA A2G | 0.5 | 0.90566 |
41 | MBG NAG | 0.5 | 0.851852 |
42 | NAG NAG FUL BMA MAN MAN NAG GAL | 0.495495 | 1 |
43 | UMG | 0.494845 | 0.816667 |
44 | BMA MAN MAN NAG GAL NAG | 0.49 | 0.90566 |
45 | NAG GAL NAG GAL NAG GAL | 0.488636 | 0.924528 |
46 | NAG GAL NAG GAL | 0.488636 | 0.90566 |
47 | BGC GAL NAG | 0.488372 | 0.849057 |
48 | NGT NAG | 0.482759 | 0.761905 |
49 | BGC GAL GLA NGA | 0.477778 | 0.849057 |
50 | AH0 NAG | 0.477273 | 0.844828 |
51 | SN5 SN5 | 0.475 | 0.754386 |
52 | GUM | 0.474227 | 0.816667 |
53 | MMA MAN NAG | 0.465116 | 0.851852 |
54 | 2F8 | 0.464789 | 0.796296 |
55 | MAG | 0.464789 | 0.796296 |
56 | MAN MAN MAN NAG NAG | 0.462366 | 0.90566 |
57 | AMU NAG | 0.460674 | 0.907407 |
58 | GAL FUC A2G | 0.45977 | 0.867925 |
59 | GN1 | 0.459459 | 0.709677 |
60 | NG1 | 0.459459 | 0.709677 |
61 | NAG NAG BMA MAN MAN NAG GAL NAG | 0.457944 | 0.924528 |
62 | NM9 NAG | 0.454545 | 0.890909 |
63 | FHY | 0.452632 | 0.859649 |
64 | NAG AH0 | 0.451613 | 0.844828 |
65 | NAA AMI NA1 | 0.45098 | 0.7 |
66 | NDG BMA MAN MAN NAG GAL NAG | 0.448598 | 0.924528 |
67 | JXD | 0.447619 | 0.728571 |
68 | NAG GAL | 0.443038 | 0.849057 |
69 | NAG NAG MAN MAN MAN | 0.44 | 0.90566 |
70 | BGC FUC GAL NAG GAL | 0.44 | 0.867925 |
71 | BDP NPO NDG BDP NDG | 0.439252 | 0.720588 |
72 | MMA MAN NAG MAN NAG NAG | 0.4375 | 0.907407 |
73 | BGC FUC GAL NAG | 0.4375 | 0.867925 |
74 | BMA Z4Y NAG | 0.43617 | 0.833333 |
75 | BGC FUC GAL FUC A2G | 0.43299 | 0.886792 |
76 | GYU | 0.432099 | 0.813559 |
77 | BGC GAL FUC A2G | 0.428571 | 0.867925 |
78 | BGC GAL NAG NAG GAL GAL | 0.425743 | 0.90566 |
79 | C4W NAG FUC BMA | 0.425743 | 0.875 |
80 | TVD GAL | 0.425 | 0.888889 |
81 | C4W NAG FUC BMA MAN NAG | 0.424779 | 0.875 |
82 | SN5 NGT SN5 | 0.421053 | 0.6875 |
83 | NAG GAL GLC NAG GLC RAM | 0.416667 | 0.90566 |
84 | 3YW | 0.4125 | 0.811321 |
85 | ALA ASN LYS NAG NAG BMA MAN MAN NAG NAG | 0.40678 | 0.910714 |
86 | NAG ASN NAG BMA MAN MAN NAG NAG | 0.40678 | 0.894737 |
87 | BGC GAL NGA GAL | 0.406593 | 0.849057 |
88 | LEC NGA | 0.40625 | 0.720588 |
89 | NAG FUC GAL FUC A2G | 0.405941 | 0.924528 |
90 | NAG GAL FUC FUC A2G | 0.405941 | 0.924528 |
91 | GAL NAG | 0.404762 | 0.849057 |
92 | NAG BDP NAG BDP NAG BDP NAG | 0.40404 | 0.907407 |
93 | NAG NAG | 0.402299 | 0.924528 |
94 | NAG BMA MAN MAN NAG GAL NAG GAL | 0.401869 | 0.924528 |
95 | ALA NAG AH0 DAL | 0.4 | 0.830508 |
96 | MA8 | 0.4 | 0.821429 |
97 | C4W NAG FUC BMA MAN MAN NAG NAG | 0.4 | 0.875 |
No: | Ligand | Similarity coefficient |
---|---|---|
1 | NAG NAG NAG NDG | 0.9681 |
2 | NDG NAG NAG NAG | 0.9515 |
3 | NDG NAG NAG NDG | 0.9436 |
This union binding pocket(no: 1) in the query (biounit: 2wk2.bio1) has 44 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 5Y2C | NAG NAG NAG NAG NAG | 38.1201 |
2 | 4P8X | NAG NAG NAG NAG NAG NAG | 39.3531 |
3 | 1NWU | NAG NAG NAG NDG | 40.884 |
This union binding pocket(no: 2) in the query (biounit: 2wk2.bio1) has 44 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
1 | 5Y2C | NAG NAG NAG NAG NAG | 38.1201 |
2 | 4P8X | NAG NAG NAG NAG NAG NAG | 39.3531 |
3 | 1NWU | NAG NAG NAG NDG | 40.884 |