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Receptor
PDB id Resolution Class Description Source Keywords
6AC9 2.07 Å EC: 2.7.11.1 CRYSTAL STRUCTURE OF HUMAN VACCINIA-RELATED KINASE 1 (VRK1) WITH AMP-PNP HOMO SAPIENS KINASE VACCINIA-RELATED KINASE VRK1 ADENOSINE TRIPHOSPHATAMP-PNP TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF HUMAN VACCINIA-RELATED KINASE IN COMPLEX WITH AMP-PNP, A NON-HYDROLYSABLE ATP ANA PROTEIN SCI. 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:403;
C:403;
D:404;
B:403;
A:404;
B:404;
B:405;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
GOL D:403;
C:401;
Invalid;
Invalid;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
PG4 A:406;
B:407;
Invalid;
Invalid;
none;
none;
submit data
194.226 C8 H18 O5 C(COC...
ANP D:402;
B:401;
A:401;
C:402;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
506.196 C10 H17 N6 O12 P3 c1nc(...
CL B:402;
C:404;
D:405;
A:405;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
35.453 Cl [Cl-]
MG A:402;
D:401;
C:405;
B:406;
Invalid;
Part of Protein;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
24.305 Mg [Mg+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6AC9 2.07 Å EC: 2.7.11.1 CRYSTAL STRUCTURE OF HUMAN VACCINIA-RELATED KINASE 1 (VRK1) WITH AMP-PNP HOMO SAPIENS KINASE VACCINIA-RELATED KINASE VRK1 ADENOSINE TRIPHOSPHATAMP-PNP TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF HUMAN VACCINIA-RELATED KINASE IN COMPLEX WITH AMP-PNP, A NON-HYDROLYSABLE ATP ANA PROTEIN SCI. 2018
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 117 families.
1 6AC9 - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 91 families.
1 6AC9 - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 60 families.
1 6AC9 - ANP C10 H17 N6 O12 P3 c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ANP; Similar ligands found: 373
No: Ligand ECFP6 Tc MDL keys Tc
1 ANP 1 1
2 A2D 0.810811 0.945205
3 B4P 0.802632 0.945205
4 AP5 0.802632 0.945205
5 ADP 0.802632 0.972222
6 BA3 0.789474 0.945205
7 AU1 0.782051 1
8 HEJ 0.772152 0.972222
9 ATP 0.772152 0.972222
10 AT4 0.769231 0.933333
11 AN2 0.769231 0.986111
12 5FA 0.7625 0.972222
13 AQP 0.7625 0.972222
14 M33 0.759494 0.932432
15 MAP 0.752941 0.972973
16 ACP 0.75 0.945946
17 AR6 0.740741 0.945205
18 APR 0.740741 0.945205
19 ACQ 0.73494 0.945946
20 AD9 0.731707 0.945946
21 SAP 0.731707 0.921053
22 AGS 0.731707 0.921053
23 A 0.723684 0.944444
24 AMP 0.723684 0.944444
25 ATF 0.717647 0.933333
26 ADX 0.716049 0.851852
27 CA0 0.716049 0.92
28 6YZ 0.709302 0.945946
29 50T 0.707317 0.932432
30 PRX 0.698795 0.87013
31 ABM 0.696203 0.893333
32 AP2 0.679012 0.933333
33 A12 0.679012 0.933333
34 APC 0.678571 0.933333
35 T99 0.674419 0.933333
36 TAT 0.674419 0.933333
37 A22 0.674157 0.958904
38 SRA 0.670886 0.894737
39 SRP 0.670455 0.883117
40 5AL 0.666667 0.906667
41 A1R 0.659341 0.884615
42 ADQ 0.659341 0.92
43 A3R 0.659341 0.884615
44 3OD 0.648936 0.92
45 BIS 0.648936 0.909091
46 5SV 0.648352 0.82716
47 9X8 0.645161 0.896104
48 OAD 0.645161 0.92
49 25L 0.642105 0.958904
50 AMO 0.641304 0.907895
51 G5P 0.636364 0.897436
52 DLL 0.634409 0.906667
53 AHX 0.634409 0.897436
54 00A 0.634409 0.860759
55 ADV 0.632184 0.907895
56 RBY 0.632184 0.907895
57 ADP PO3 0.632184 0.917808
58 NB8 0.631579 0.897436
59 25A 0.630435 0.945205
60 OOB 0.630435 0.906667
61 8QN 0.630435 0.906667
62 G3A 0.626263 0.897436
63 4AD 0.623656 0.896104
64 PAJ 0.623656 0.8625
65 LAD 0.621053 0.839506
66 TXA 0.614583 0.907895
67 1ZZ 0.614583 0.819277
68 ME8 0.614583 0.819277
69 GTA 0.613861 0.864198
70 9ZD 0.612903 0.909091
71 9ZA 0.612903 0.909091
72 3UK 0.610526 0.894737
73 SON 0.604651 0.907895
74 ADP ALF 0.604396 0.848101
75 ALF ADP 0.604396 0.848101
76 PR8 0.604167 0.829268
77 B5V 0.604167 0.883117
78 WAQ 0.604167 0.860759
79 4UV 0.6 0.871795
80 GAP 0.6 0.87013
81 PTJ 0.597938 0.873418
82 FYA 0.597938 0.881579
83 VO4 ADP 0.597826 0.906667
84 ADP VO4 0.597826 0.906667
85 LMS 0.597561 0.829268
86 UP5 0.596154 0.896104
87 FA5 0.59596 0.883117
88 YAP 0.59596 0.871795
89 PAP 0.595506 0.958333
90 A4P 0.59434 0.823529
91 XAH 0.59 0.841463
92 4UU 0.588235 0.871795
93 AFH 0.588235 0.8625
94 9SN 0.585859 0.85
95 2A5 0.58427 0.894737
96 T5A 0.583333 0.821429
97 DQV 0.582524 0.932432
98 NAI 0.580952 0.884615
99 B5M 0.58 0.871795
100 B5Y 0.58 0.871795
101 ITT 0.579545 0.917808
102 ATR 0.577778 0.944444
103 OMR 0.575472 0.831325
104 5AS 0.574713 0.781609
105 YLP 0.571429 0.8
106 48N 0.571429 0.873418
107 AP0 0.570093 0.873418
108 4TC 0.570093 0.873418
109 7D3 0.569767 0.881579
110 ADJ 0.568807 0.831325
111 GNP 0.568421 0.922078
112 9GM 0.568421 0.922078
113 DAL AMP 0.568421 0.881579
114 6V0 0.566038 0.873418
115 TXD 0.566038 0.884615
116 DND 0.566038 0.907895
117 NAX 0.566038 0.851852
118 4UW 0.566038 0.839506
119 NXX 0.566038 0.907895
120 XYA 0.565789 0.821918
121 RAB 0.565789 0.821918
122 ADN 0.565789 0.821918
123 AOC 0.564706 0.8
124 7D4 0.561798 0.881579
125 ADP BMA 0.561224 0.894737
126 TXE 0.560748 0.884615
127 TYM 0.560748 0.883117
128 GA7 0.557692 0.883117
129 YLC 0.555556 0.819277
130 YLB 0.555556 0.8
131 139 0.554545 0.851852
132 5N5 0.551282 0.797297
133 JB6 0.55 0.860759
134 LAQ 0.54717 0.819277
135 F2R 0.544643 0.843373
136 MYR AMP 0.544554 0.797619
137 5CD 0.544304 0.783784
138 A4D 0.544304 0.797297
139 80F 0.54386 0.821429
140 7MD 0.542857 0.864198
141 6AD 0.542553 0.886076
142 A2R 0.541667 0.958904
143 UPA 0.541284 0.884615
144 YLA 0.540541 0.8
145 A A 0.54 0.918919
146 BTX 0.539823 0.821429
147 COD 0.539823 0.793103
148 HFD 0.537634 0.921053
149 G5A 0.537634 0.781609
150 3DH 0.535714 0.753247
151 AYB 0.535714 0.790698
152 CNA 0.535714 0.907895
153 BT5 0.535088 0.811765
154 ATP A A A 0.533981 0.905405
155 IOT 0.531532 0.811765
156 MTA 0.53012 0.753247
157 3AM 0.529412 0.90411
158 A3P 0.52809 0.944444
159 PPS 0.526316 0.851852
160 NAD 0.526316 0.906667
161 EP4 0.52439 0.734177
162 7D5 0.52381 0.855263
163 AMP DBH 0.52381 0.87013
164 J7C 0.522727 0.75
165 A5A 0.520833 0.809524
166 EAD 0.520661 0.851852
167 TSB 0.520408 0.821429
168 AHZ 0.518519 0.797619
169 DTA 0.518072 0.766234
170 M2T 0.518072 0.716049
171 A3D 0.517241 0.894737
172 6RE 0.517241 0.740741
173 YLY 0.516949 0.790698
174 SSA 0.515464 0.802326
175 NA7 0.514852 0.933333
176 ARG AMP 0.514019 0.809524
177 AR6 AR6 0.514019 0.893333
178 7MC 0.513514 0.843373
179 A2P 0.511111 0.930556
180 52H 0.510204 0.781609
181 VMS 0.510204 0.790698
182 54H 0.510204 0.790698
183 TYR AMP 0.509434 0.848101
184 TAD 0.509259 0.8625
185 NAQ 0.508333 0.85
186 A3N 0.505618 0.766234
187 AV2 0.505155 0.893333
188 53H 0.50505 0.781609
189 5CA 0.50505 0.802326
190 8X1 0.50505 0.755556
191 ARU 0.504951 0.839506
192 ZID 0.504132 0.894737
193 P1H 0.504 0.831325
194 NAE 0.5 0.871795
195 3AT 0.5 0.945205
196 AVV 0.5 0.873418
197 P5A 0.495146 0.747253
198 NSS 0.49505 0.802326
199 LSS 0.49505 0.764045
200 DSZ 0.49505 0.802326
201 N0B 0.491803 0.8
202 AF3 ADP 3PG 0.491071 0.817073
203 NVA LMS 0.490196 0.755556
204 DAT 0.489362 0.881579
205 IMO 0.488889 0.90411
206 ZAS 0.488636 0.792208
207 FDA 0.488372 0.813953
208 NAJ PZO 0.487395 0.85
209 4TA 0.487179 0.788235
210 LPA AMP 0.486486 0.797619
211 LEU LMS 0.485437 0.755556
212 DTP 0.484536 0.881579
213 V3L 0.484536 0.945205
214 S4M 0.483516 0.651685
215 GJV 0.483516 0.731707
216 DZD 0.483051 0.8625
217 2AM 0.482759 0.917808
218 5AD 0.481013 0.726027
219 GSU 0.480769 0.781609
220 KAA 0.480769 0.755556
221 NDE 0.480315 0.907895
222 M24 0.479339 0.851852
223 MAO 0.478261 0.761905
224 NEC 0.477778 0.727273
225 DSH 0.477778 0.707317
226 FAS 0.477273 0.831325
227 FAD 0.477273 0.831325
228 RGT 0.476636 0.933333
229 9K8 0.47619 0.698925
230 G A A A 0.474576 0.85
231 0WD 0.474576 0.897436
232 FNK 0.474074 0.786517
233 5X8 0.473684 0.74359
234 6FA 0.473282 0.821429
235 NDC 0.472868 0.85
236 FB0 0.472868 0.786517
237 YSA 0.472222 0.781609
238 7DD 0.468085 0.958333
239 OVE 0.466667 0.881579
240 MHZ 0.463158 0.701149
241 8PZ 0.462963 0.802326
242 A G 0.462185 0.860759
243 AMP NAD 0.462185 0.881579
244 A3G 0.461538 0.779221
245 NAJ PYZ 0.459677 0.809524
246 6C6 0.459184 0.858974
247 SFG 0.458333 0.730769
248 U A G G 0.458333 0.860759
249 7D7 0.45679 0.723684
250 128 0.45614 0.8
251 SFD 0.455224 0.736842
252 6IA 0.454545 0.817073
253 DDS 0.454545 0.855263
254 GDP 0.454545 0.896104
255 ODP 0.453782 0.886076
256 NJP 0.453782 0.921053
257 7DT 0.453608 0.958333
258 A7D 0.452632 0.75641
259 Z5A 0.452381 0.802326
260 WSA 0.452174 0.790698
261 U A 0.45082 0.884615
262 7C5 0.45045 0.797468
263 FAY 0.449275 0.841463
264 NDP 0.449153 0.897436
265 SA8 0.44898 0.690476
266 A5D 0.44898 0.766234
267 71V 0.446809 0.884615
268 GGZ 0.446602 0.804878
269 RFL 0.446043 0.802326
270 2SA 0.445545 0.907895
271 SAI 0.444444 0.716049
272 GP3 0.444444 0.897436
273 SAH 0.444444 0.725
274 PO4 PO4 A A A A PO4 0.443396 0.878378
275 A A A 0.443396 0.881579
276 4YB 0.442478 0.764045
277 SMM 0.441176 0.670455
278 S7M 0.441176 0.674419
279 GTP 0.441176 0.896104
280 Y3J 0.440476 0.706667
281 SAM 0.44 0.674419
282 649 0.439655 0.747253
283 12D 0.438596 0.809524
284 A3S 0.4375 0.789474
285 NPW 0.436975 0.864198
286 GCP 0.436893 0.873418
287 AAT 0.435644 0.690476
288 GNH 0.435644 0.909091
289 EEM 0.435644 0.674419
290 ETB 0.435484 0.813953
291 DCA 0.435484 0.804598
292 N6P 0.433962 0.890411
293 NZQ 0.433333 0.886076
294 TXP 0.433333 0.897436
295 PGS 0.43299 0.860759
296 APU 0.432203 0.871795
297 PUA 0.432 0.8625
298 62F 0.431655 0.841463
299 F2N 0.431507 0.795455
300 DA 0.430108 0.855263
301 D5M 0.430108 0.855263
302 J7V 0.429688 0.813953
303 NIA 0.428571 0.848101
304 COA 0.428571 0.804598
305 6K6 0.428571 0.905405
306 A3T 0.428571 0.8
307 0T1 0.428571 0.804598
308 P5F 0.427586 0.804598
309 AAM 0.425532 0.944444
310 0UM 0.424528 0.682353
311 8Q2 0.423729 0.775281
312 G1R 0.423077 0.884615
313 AMZ 0.422222 0.891892
314 C2R 0.422222 0.88
315 A U 0.420168 0.848101
316 IDP 0.42 0.894737
317 GSP 0.419048 0.851852
318 30N 0.418605 0.736842
319 CAO 0.418605 0.777778
320 DG1 0.418605 0.897436
321 1DG 0.418605 0.897436
322 COS 0.418605 0.786517
323 AMX 0.418605 0.813953
324 TM1 0.418182 0.797619
325 A6D 0.416667 0.746988
326 K15 0.416667 0.666667
327 V1N 0.415929 0.893333
328 CMX 0.415385 0.804598
329 SCO 0.415385 0.804598
330 GEK 0.415094 0.719512
331 XNP 0.414634 0.851852
332 NHD 0.414634 0.881579
333 9JJ 0.413793 0.841463
334 AIR 0.413793 0.876712
335 COK 0.413534 0.786517
336 G2R 0.412844 0.8625
337 ACO 0.412214 0.777778
338 FAM 0.412214 0.786517
339 FCX 0.412214 0.777778
340 NAP 0.410853 0.92
341 FA9 0.409396 0.843373
342 SXZ 0.409091 0.694118
343 HAX 0.409091 0.806818
344 TAP 0.407692 0.884615
345 2MC 0.407407 0.752688
346 62X 0.407407 0.651685
347 GKE 0.40708 0.8625
348 GDC 0.40708 0.8625
349 GDD 0.40708 0.8625
350 3KK 0.406015 0.786517
351 FYN 0.406015 0.804598
352 NVA 2AD 0.405941 0.740741
353 NA0 0.40458 0.907895
354 101 0.404255 0.855263
355 G 0.40404 0.883117
356 5GP 0.40404 0.883117
357 HDV 0.403846 0.87013
358 MGP 0.403846 0.8625
359 OXK 0.402985 0.786517
360 MCD 0.402985 0.786517
361 CA6 0.402985 0.714286
362 SOP 0.402985 0.786517
363 3AD 0.402299 0.783784
364 S8M 0.401869 0.78481
365 YE1 0.40146 0.795455
366 NMX 0.4 0.782609
367 7RP 0.4 0.902778
368 2VA 0.4 0.779221
369 1VU 0.4 0.777778
370 CO6 0.4 0.786517
371 CMC 0.4 0.786517
372 6G0 0.4 0.8625
373 GMV 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6AC9; Ligand: ANP; Similar sites found with APoc: 464
This union binding pocket(no: 1) in the query (biounit: 6ac9.bio3) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 1WAP TRP None
2 1EHI ADP 1.35135
3 3TII ANP 1.62162
4 3T1A 5MA 1.62162
5 4TM3 FAD 1.62162
6 2HGS ADP 1.62162
7 1OBD ATP 1.63399
8 3ETH ATP 1.69014
9 5JDI NAP 1.73611
10 3JQ7 NAP 1.73611
11 4XDU ADP 1.76471
12 3VPC ADP 1.77305
13 5VZ0 ADP 1.89189
14 3ORQ ADP 1.89189
15 5Y0T TAT 1.89189
16 4ZS4 ATP 1.9544
17 2CFC NAD 2
18 3VX3 ADP 2.01613
19 1Z2P ACP 2.16049
20 1Z2P I3S 2.16049
21 4MV1 ADP 2.16216
22 2PUL ACP 2.16216
23 3DNT ATP 2.16216
24 4UWH JXM 2.16216
25 1XNG ATP 2.16216
26 5FI4 5XV 2.16718
27 3PDT ADP 2.18182
28 2IF8 ADP 2.20386
29 1GEG NAD 2.34375
30 4ZGP ADP 2.38908
31 4OCV ANP 2.43243
32 3DLG GWE 2.43243
33 5VLQ ANP 2.43243
34 4A4Z ANP 2.43243
35 4LH7 1X8 2.47678
36 3Q8G PEE 2.5
37 3W0O ADP 2.5788
38 3W0O HY0 2.5788
39 1E4E ADP 2.62391
40 4B8V NDG NAG NAG NAG 2.63158
41 6CZI 38E 2.67857
42 3X01 AMP 2.7027
43 4CYI ATP 2.7027
44 2IO8 ADP 2.7027
45 2CFM AMP 2.7027
46 4PU5 ANP 2.7027
47 1ZHX HC3 2.7027
48 3FSY SCA 2.71084
49 4CSV STI 2.90909
50 1WXI AMP 2.90909
51 5K2M ADP 2.9304
52 5C1P DAL DAL 2.94118
53 5C1P ADP 2.94118
54 3KMW ATP 2.95203
55 2VQD AP2 2.97297
56 4OCJ NDG 2.97297
57 1OX5 1PR 2.97297
58 2Q4H AMP 3.1339
59 2Q7D ANP 3.17919
60 5A89 ADP 3.20513
61 1IA9 ANP 3.21429
62 4JWF SAH 3.22581
63 4AZW ATP 3.24324
64 2BIF SIN 3.24324
65 3G4G D71 3.24324
66 5IM3 DTP 3.24324
67 3IS2 FAD 3.24675
68 5HES 032 3.25733
69 1ST0 GTG 3.2641
70 5IGI GMP 3.32226
71 5IGI ZIT 3.32226
72 3D72 FAD 3.3557
73 1VL8 NAP 3.37079
74 3TM0 B31 3.42205
75 3TM0 ANP 3.42205
76 5C03 AGS 3.50877
77 5AE9 OKO 3.51351
78 2V58 LZJ 3.51351
79 3VSV XYS 3.51351
80 6EZ6 C5Z 3.51351
81 2YRX AMP 3.51351
82 1OLM VTQ 3.51351
83 5KO1 6UY 3.53357
84 5GZ9 ANP 3.60656
85 3FGC FMN 3.66197
86 2BD0 NAP 3.68852
87 5DZT AMP 3.78378
88 1M5B BN1 3.80228
89 2XOC ADP 3.83142
90 5F90 LMR 3.84615
91 3A6T 8OG 3.87597
92 4NZN ANP 3.93939
93 4NZN 2OU 3.93939
94 1S68 AMP 4.01606
95 4U98 ACP 4.05405
96 4B63 ORN 4.05405
97 4B63 NAP 4.05405
98 4B63 FAD 4.05405
99 1EWF PC1 4.05405
100 1SC6 NAD 4.05405
101 4EN4 ATP 4.16667
102 4EN4 GT0 4.16667
103 4EN4 GT1 4.16667
104 5JFS 6K0 4.22078
105 6CAM BGC 4.23729
106 5KTC FUH 4.25532
107 5KTC COA 4.25532
108 3KV8 FAH 4.31655
109 3WO0 ALA 4.32432
110 3WO0 ADP 4.32432
111 2YW2 ATP 4.32432
112 4PZ6 GMP 4.32432
113 4C5N PXL 4.34783
114 4C5N ACP 4.34783
115 4K4D HFQ 4.37956
116 4WOV 3SM 4.4164
117 2EWM NAD 4.41767
118 1KQP ADJ 4.42804
119 6A1G 9OL 4.44444
120 5YSZ CBI 4.44444
121 4RDL FUC GAL NDG FUC 4.54545
122 2PR5 FMN 4.54545
123 6CGD AKN 4.59016
124 6CGD GNP 4.59016
125 6C1S EFV 4.59459
126 3ILR SGN 4.59459
127 3ILR IXD 4.59459
128 3K5I ADP 4.59459
129 3K5I AIR 4.59459
130 6EOM ALA LYS 4.59459
131 3IAE D7K 4.59459
132 3VPD ANP 4.62633
133 2GQR ADP 4.64135
134 4DFU QUE 4.65839
135 3ZS7 ATP 4.66667
136 5C4L 4XR 4.6729
137 5C4L SIS 4.6729
138 3T50 FMN 4.6875
139 5V22 SAH 4.7138
140 3I0O ADP 4.71976
141 5OO5 UUA 4.83871
142 5OES ADP 4.86486
143 5OLK DTP 4.86486
144 6A5K SAM 4.86486
145 1OIJ AKG 4.98339
146 5OJI ISN 5
147 5OJI NAP 5
148 5JLB SAH 5.01792
149 2QX0 PH2 5.03145
150 4FMU 0UM 5.03597
151 2DTJ THR 5.05618
152 3AB4 THR 5.05618
153 6FL8 TIY 5.10638
154 6FL8 ADP 5.10638
155 5MW8 ATP 5.13514
156 4OAV ACP 5.13514
157 3UDZ ADP 5.13514
158 5YK1 ANP 5.13514
159 5TDF ADP 5.13514
160 4NFE BEN 5.13514
161 1QFT HSM 5.14286
162 1CKM GTP 5.15152
163 5ZCT ANP 5.22876
164 5WNL STU 5.26316
165 2FB3 GTP 5.29412
166 2FB3 MET 5.29412
167 2FB3 5AD 5.29412
168 2J4K U5P 5.30973
169 2BKK ADP 5.32544
170 3VPB ADP 5.35714
171 3WVR AMP 5.40541
172 1ZOA 140 5.40541
173 2VO4 GTB 5.47945
174 6FYL 3NG 5.50964
175 1VJY 460 5.61056
176 1IY8 NAD 5.61798
177 4CC6 L5Y 5.66038
178 4YZC STU 5.67568
179 4GYI ADP 5.67568
180 5LXT ACP 5.67568
181 1GSA ADP 5.6962
182 4CQM NAP 5.7377
183 4UTG ANP 5.78035
184 3A28 NAD 5.81395
185 4NBT NAD 5.83333
186 5COU ATP 5.88235
187 4XGX ADP 5.88235
188 1MH5 HAL 5.93607
189 5EQY 5RA 5.94595
190 2QK4 ATP 5.94595
191 4O1P ANP 5.94595
192 1T36 ADP 5.94595
193 5ENZ UDP 5.94595
194 4O4F IHP 6.04839
195 4O4F ATP 6.04839
196 1XJD STU 6.08696
197 5ZAI COA 6.17761
198 4YNM SAM 6.19469
199 1ZTH ADP 6.20155
200 1ZP9 ATP 6.20155
201 6FYV 3NG 6.21622
202 1XVB BHL 6.21622
203 4CYD CMP 6.22222
204 4XZ3 ACP 6.52174
205 2DT9 THR 6.58683
206 5QIN J2V 6.64557
207 5X8I SQZ 6.6474
208 5HZ9 5M8 6.66667
209 2QLU ADE 6.6879
210 2VPQ ANP 6.75676
211 6G33 5ID 6.78466
212 4IX4 ADP 6.85714
213 5VC5 96M 6.92042
214 2ET1 GLV 6.96517
215 2WU6 DKI 7.02703
216 2R3A SAM 7.02703
217 1TQP ATP 7.0922
218 2RIF AMP 7.0922
219 4EWN 0VR 7.11462
220 3TDV GDP 7.18954
221 5IH1 GDP 7.28477
222 5IH1 6BQ 7.28477
223 5SVV FMN 7.29927
224 3HAV ATP 7.35786
225 3HY3 10F 7.38916
226 4XYM A12 7.3913
227 2GJ5 VD3 7.40741
228 6CMJ F6J 7.47664
229 3VHE 42Q 7.52089
230 3PN1 IVH 7.54717
231 4ASE AV9 7.64873
232 6E8I PTR 7.69231
233 2R7K ACP 7.75623
234 2R7K AMZ 7.75623
235 4WB7 ATP 7.83784
236 1RWQ 5AP 7.83784
237 6E2B PT7 7.89474
238 5DBX ANP 7.92683
239 2WEL K88 7.95107
240 2GQS ADP 8.01688
241 6GG9 FMN 8.02469
242 5JKG 6LF 8.03859
243 2ZV2 609 8.05369
244 4QM9 CYS 8.09249
245 2PYW ADP 8.10811
246 4R78 AMP 8.10811
247 3H9R TAK 8.18182
248 2Y6O 1N1 8.24742
249 3UIM ANP 8.28221
250 2QCS ANP 8.28571
251 1XDN ATP 8.30325
252 2V7O DRN 8.33333
253 3KRL KRL 8.35821
254 5I35 ANP 8.37838
255 3VOT ADP 8.37838
256 3V4S ATP 8.37838
257 4FL3 ANP 8.37838
258 3V4S ADP 8.37838
259 3BEO UDP 8.37838
260 4WW7 AMP 8.42912
261 4AG8 AXI 8.5443
262 1RE8 BD2 8.57143
263 4WB6 ATP 8.57143
264 3IDB ANP 8.57143
265 3FHI ANP 8.57143
266 2VN9 GVD 8.63787
267 5MY8 RXZ 8.64865
268 4Y93 746 8.64865
269 3KAL ADP 8.64865
270 1M0W ANP 8.64865
271 5NW7 9C2 8.64865
272 4GLW 0XT 8.85246
273 3ALN ANP 8.8685
274 2GU8 796 8.90208
275 2X2M X2M 8.9172
276 3IGO ANP 8.91892
277 6GIN IR2 8.9701
278 5ZZA LAB 9.09091
279 5WGR PM7 9.18919
280 4U0I 0LI 9.20635
281 3ZZS TRP 9.23077
282 1PK8 ATP 9.45946
283 5NKB 8ZT 9.47712
284 4CRL C1I 9.72973
285 5TT6 ATP 9.72973
286 4UXH T5A 9.78261
287 1IOW ADP 9.80392
288 1IOW PHY 9.80392
289 2OO8 RAJ 10.0946
290 1ZY5 ANP 10.231
291 4Z4P SAH 10.241
292 4FE2 ADP 10.2703
293 1I7L ATP 10.356
294 4AUA 4AU 10.4235
295 5Y86 HRM 10.5405
296 5HCY 60D 10.574
297 1VKF CIT 10.6383
298 1BYG STU 10.7914
299 1U59 STU 10.8014
300 1OPK P16 10.8108
301 1CM8 ANP 10.8992
302 3PP0 03Q 10.9467
303 2B9F ADP 11.0482
304 5USZ SKE 11.0727
305 5AWM ANP 11.0811
306 5EKO N17 11.0811
307 3SRV S19 11.1913
308 1OUK 084 11.2022
309 1AUX AGS 11.254
310 4AFH L0B 11.3043
311 3LXN MI1 11.3208
312 3GC8 B45 11.3514
313 2J3M ATP 11.3514
314 4F4P 0SB 11.3553
315 4LOO SB4 11.3573
316 2WEI VGG 11.4983
317 3EYA TDP 11.6216
318 1WK9 TSB 11.6438
319 3PLS ANP 11.745
320 4MZQ 1VU 11.8056
321 5FBN 5WF 11.8081
322 5D48 L96 11.8421
323 3PVW QRX 11.8919
324 4WHZ 3NL 11.8919
325 3TTI KBI 11.8919
326 5UKL SIX 11.8919
327 4GJ3 0XP 11.9205
328 5HQ0 LZ9 11.9205
329 6GU6 1QK 11.9205
330 4IZY 1J2 11.9241
331 6FS0 E4W 11.9497
332 4E1Z 0MX 12.0275
333 4UX9 ANP 12.0879
334 5FUW QBT 12.0879
335 3PTG 932 12.1212
336 3GNI ATP 12.1622
337 3BW2 FMN 12.1951
338 3E7O 35F 12.2222
339 2XVD AS6 12.2517
340 2BPM 529 12.2977
341 1W4R TTP 12.3077
342 5CKW ANP 12.4324
343 2VZ6 FEF 12.4324
344 4BCQ TJF 12.6246
345 4BCM T7Z 12.6246
346 4BCN T9N 12.6667
347 6GUE FB8 12.6866
348 2XMY CDK 12.7517
349 5LMK 6ZK 12.7946
350 1JPA ANP 12.8205
351 4CFU 2WC 12.9771
352 4EWH T77 13.0909
353 5EJ2 NAD 13.3117
354 4NST ADP 13.3903
355 5EFQ ADP 13.5447
356 4TWP AXI 13.6531
357 5T8O 76Z 13.7536
358 2QF7 AGS 14.0541
359 2B9I ADP 14.1643
360 2B9J ADP 14.1643
361 2B9H ADP 14.1643
362 6ES0 BW8 14.1956
363 2GC0 PAN 14.3617
364 4FG8 ATP 14.9206
365 1NHZ 486 15
366 2OVD DAO 15.3846
367 4Q5H ANP 15.5172
368 3HMO STU 15.7895
369 4WNK 453 15.9459
370 5MJA 7O3 15.9459
371 6F5U CQN 16.0714
372 4AU8 Z3R 16.2162
373 3O0G 3O0 16.4384
374 1UNH IXM 16.4384
375 4N14 WR7 16.5605
376 3NW7 LGV 16.6124
377 3BZ3 YAM 16.6667
378 3C1X CKK 17.027
379 4BHN BH9 17.0659
380 5N87 N66 17.2524
381 3TXO 07U 17.5637
382 1TZD ADP 17.8182
383 5CEO 50D 18
384 3HZT J60 18.1081
385 1PHK ATP 18.4564
386 4NM5 ADP 18.6486
387 2JLD AG1 18.6486
388 3ZRM ZRM 18.8679
389 4QMN DB8 18.9189
390 2F57 23D 18.9274
391 2AQX ATP 19.0311
392 1W2D 4IP 19.2453
393 1W2D ADP 19.2453
394 6E2O S0L 19.322
395 2A19 ANP 19.3662
396 4PNI KQQ 19.4595
397 1Y57 MPZ 19.4595
398 4L9I 8PR 19.4595
399 1U5R ATP 19.5402
400 5EOB 5QQ 19.7492
401 5EH0 5NW 19.7674
402 2H8H H8H 20
403 3F7Z 34O 20
404 1O9U ADZ 20.2857
405 4OTH DRN 20.5279
406 5LI9 ACP 20.5714
407 3SLS ANP 20.7237
408 4AT3 LTI 21.0702
409 4CLI 5P8 21.1009
410 4P5Z Q7M 21.6066
411 6GQM F8H 21.6463
412 4YMJ 4EJ 21.7105
413 5JGA 6KC 21.9048
414 5U6C 7YS 21.9048
415 4IDT T28 21.9101
416 4FF8 14S 21.9814
417 4ONA UW1 22.1622
418 3VRY B43 22.1622
419 3SXS PP2 22.3881
420 3GC0 AMP 22.4924
421 3LXK MI1 22.63
422 4QTB 38Z 22.8947
423 5TO8 7FM 23.0496
424 2PVF ACP 23.0539
425 3LQV ADE 23.0769
426 6GWR FEW 23.1746
427 1IR3 ANP 23.5294
428 3GQI ACP 23.6196
429 4H3P ANP 24.5856
430 4H3Q ANP 24.5856
431 2F2U M77 24.5946
432 1V0O INR 24.6528
433 5UR1 YY9 24.7588
434 4K33 ACP 24.9231
435 5BVE 4VG 24.9307
436 5ZTN CUR 24.9417
437 6C0T EE4 25.072
438 5WO4 B7V 25.1656
439 5LPZ ADP 25.3012
440 3G5D 1N1 25.5245
441 3RI1 3RH 25.5591
442 6C7Y ADP 26.2238
443 3BU5 ATP 26.6667
444 3E8N VRA 26.9795
445 3E8N ATP 26.9795
446 3EKK GS2 27.0358
447 5LPB ADP 28.3784
448 4DC2 ADE 28.5714
449 3FC2 IBI 28.9552
450 5TA6 79D 29.3296
451 4E93 GUI 30
452 4Y85 499 30.1205
453 2HK5 1BM 30.3704
454 5H2U 1N1 31.8352
455 2OFV 242 32.13
456 6CZ3 FLJ 32.197
457 4I6H 1C8 33.7662
458 4UXL 5P8 35.4037
459 4XH0 ADP 37.8378
460 5LI1 ANP 40
461 4BTK DTQ 42.73
462 5NTW 98N 45
463 5OKT 9XK 45.5414
464 4KBA 1QM 45.6193
Pocket No.: 2; Query (leader) PDB : 6AC9; Ligand: ANP; Similar sites found with APoc: 71
This union binding pocket(no: 2) in the query (biounit: 6ac9.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 4M5P FMN 0.540541
2 5UR6 8KM 1.10497
3 3B2Q ATP 1.35135
4 1RKX NAD 1.40056
5 5NJI 8Z2 1.5528
6 5JM8 ATP 1.62162
7 1DQX BMP 1.87266
8 2Q4W FAD 1.89189
9 2X3J X3J 1.89189
10 2X3J ATP 1.89189
11 5DXT 5H5 2.16216
12 3WXB NDP 2.50896
13 1UNB AKG 2.57235
14 3ZXR P3S 2.7027
15 3ZXR IQ1 2.7027
16 2WLG SOP 2.7907
17 3SJU NDP 2.86738
18 3IE3 GSH 2.87081
19 3IE3 N11 2.87081
20 3D91 REM 2.93255
21 5WKC AUJ 2.95421
22 3T4L ZEA 2.96296
23 5OCS FMN 2.97297
24 1CBK ROI 3.125
25 4CS9 AMP 3.1746
26 2BMB PMM 3.24324
27 1EIX BMQ 3.26531
28 1NVM NAD 3.52564
29 1JG3 ADN 3.82979
30 5NKN LOC 4.02299
31 1RM0 D6P 4.05405
32 3MPB FRU 4.06504
33 6ALW BNV 4.16667
34 2P4Y C03 4.33213
35 1G1T SIA GAL MAG FUC 4.4586
36 4Z87 GDP 4.59459
37 1E3W NAD 4.5977
38 1E6W NAD 4.61538
39 2CM4 RCL 4.66667
40 1DQE BOM 5.10949
41 1LOR BMP 5.26316
42 4JWJ SAH 5.44554
43 4RJK TPP 5.6042
44 5APK 76E 5.66038
45 5TT5 NAD 5.67568
46 5JBX COA 5.74713
47 6CI9 NAP 5.79151
48 2Y3S TIR 5.94595
49 5WXU FLC 5.94595
50 3KDJ A8S 7.42574
51 3AY6 NAI 7.56757
52 1TMM HHR 8.22785
53 1TMM APC 8.22785
54 2DM6 NAP 8.40841
55 1LOP SIN ALA PRO ALA NIT 9.14634
56 1NFQ NAI 9.23077
57 1QPB TPP 9.76909
58 2TPS TPS 10.1322
59 5GWT NAD 10.7914
60 5GWT SIN 10.7914
61 3B6R CRN 11.6216
62 4LA7 A1O 12.9534
63 6ASZ GLN THR ALA ARG M3L SER 13.0435
64 1T3Q FAD 13.0952
65 4MN3 ACE PHE ALA TYR M3L SER NH2 16.0714
66 3PAK MAN 16.2162
67 1J3R 6PG 16.3158
68 1DBT U5P 16.318
69 4GO7 THR 19.5
70 6C8X BVR 25.2525
71 4RFM 3P6 37.9699
Pocket No.: 3; Query (leader) PDB : 6AC9; Ligand: ANP; Similar sites found with APoc: 78
This union binding pocket(no: 3) in the query (biounit: 6ac9.bio4) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 4A0S NAP 1.62162
2 3P9C SAH 1.64835
3 1YNH SUO 1.89189
4 3T34 GDP 1.94444
5 2ZYI STE 2.10526
6 4RF2 NAP 2.20588
7 5OVL NAP 2.33333
8 3A7R LAQ 2.37389
9 5DUS APR 2.38095
10 3TY5 ATP 2.43243
11 3TY5 ADP 2.43243
12 4WOE 3S5 2.43243
13 3QWB NDP 2.69461
14 1PFY MSP 2.7027
15 3OV6 MK0 2.97297
16 4E70 N7I 2.97297
17 3OIG NAD 2.97297
18 2HKA C3S 3.07692
19 3LST SAH 3.16092
20 2WBV SIA 3.1746
21 5A89 FMN 3.20513
22 5AAV GW5 3.24324
23 5EXK 5AD 3.32326
24 1ORR NAD 3.45821
25 6H3O FAD 3.51351
26 1OJ4 CDM 3.53357
27 5WBF LAC 3.7037
28 3O03 NAP 3.78007
29 1PNO NAP 3.88889
30 3OJF IMJ 3.89105
31 3OJF NDP 3.89105
32 1ZK4 AC0 3.98406
33 4IZC 1GZ 4
34 6B9R 2HE 4.05405
35 2BVE PH5 4.20168
36 1ZPD DPX 4.22535
37 4MG8 27J 4.31373
38 4TUZ 36J 4.31373
39 5Y6Q MCN 4.32099
40 3UU7 2OH 4.38247
41 5O98 NAP 4.4164
42 3IAA TYD 4.59459
43 3RSC TYD 4.59459
44 3TKY SAH 4.61957
45 5BV3 M7G 4.63768
46 6B9T 2HE 4.86486
47 2WTN FER 5.17928
48 1KJ8 GAR 5.40541
49 1KJ8 ATP 5.40541
50 1U1I NAD 5.40541
51 1N9G NAP 5.40541
52 4WAS COO 5.49451
53 4WAS NAP 5.49451
54 2V2V V12 5.53506
55 1Z6T ADP 5.67568
56 4R38 RBF 5.71429
57 1OS7 TAU 6.00707
58 1OS7 AKG 6.00707
59 4R3U 5AD 6.32911
60 1KK8 BEF ADP 6.47482
61 3KPB SAM 6.55738
62 4B7X NAP 6.84524
63 5CUO COA 6.93069
64 3O7B SAH 6.96721
65 1F0X FAD 7.56757
66 3PQB VGP 8.64865
67 4NS0 PIO 9.02256
68 2GEK GDP 9.1133
69 1OGX EQU 9.92366
70 2CVQ NDP 10.3976
71 4L2I FAD 10.6464
72 5DKK FMN 11.0345
73 1N5D NDP 11.1111
74 2YJD YJD 12.5
75 4HIA FMN 13.6364
76 3HRD MCN 15
77 1NBU PH2 16.8067
78 4X3H ARG ILE PRO SER TYR ARG TYR ARG TYR 24.0506
Pocket No.: 4; Query (leader) PDB : 6AC9; Ligand: ANP; Similar sites found with APoc: 78
This union binding pocket(no: 4) in the query (biounit: 6ac9.bio2) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 3ZZQ TRP None
2 3ZZL TRP None
3 4D5G FAD 1.35135
4 4D5G TPP 1.35135
5 2E5A LAQ 1.72911
6 1I8T FAD 1.90736
7 3RG9 NDP 2.08333
8 5N5S NAP 2.16216
9 2VBF TPP 2.43243
10 4EIL CB3 2.43243
11 2EQA AMP 2.55682
12 5WKC TP9 2.95421
13 4CTA ATP 2.97297
14 5FAW CHT 2.97297
15 1GAW FAD 3.18471
16 3E2M E2M 3.24324
17 4OKD GLC GLC GLC 3.24324
18 5WL1 CUY 3.33333
19 5ML3 DL3 3.3557
20 6AYR BIG 3.36134
21 3C3Y SAH 3.37553
22 5AVF TAU 3.50195
23 3BL7 DD1 3.65448
24 1JQ3 AAT 3.71622
25 3P3G UKW 4
26 3P3G 3P3 4
27 4CE5 PDG 4.05405
28 1Z44 FMN 4.14201
29 2UZ1 TPP 4.59459
30 1NWW HPN 4.69799
31 5ETR 5RW 4.96894
32 5ETR APC 4.96894
33 5FOI MY8 5.13514
34 2CYE COA 5.26316
35 1FDQ HXA 5.34351
36 4RJK TDL 5.6042
37 5A0U CHT 5.67568
38 4IE6 UN9 5.67568
39 4WPF 3SN 5.68182
40 4MO2 FDA 5.97826
41 4MO2 FAD 5.97826
42 2BJF DXC 6.07903
43 1EWY FAD 6.12245
44 4I53 1C1 6.14525
45 3KCC CMP 6.15385
46 4I9B NAD 6.75676
47 4PYW ACE THR THR ALA ILE NH2 6.75676
48 5H5A 6OU 7.08333
49 4ZOH FAD 7.14286
50 2AG4 LP3 7.31707
51 3GGO NAI 7.32484
52 4N9I PCG 7.61905
53 5ODQ FAD 7.69231
54 5O96 SAM 7.7551
55 4DQL FAD 7.83784
56 1QAW TRP 8.10811
57 5VW2 FDA 8.22785
58 5VW2 NAP 8.22785
59 4NTM 2K8 8.26446
60 2VEG PMM 8.28025
61 5H5J FAD 8.41424
62 3RGA LSB 8.48057
63 5H5O PCG 8.52713
64 3MQG ACO 8.85417
65 1W0J ADP BEF 8.91892
66 3K87 FAD 9.18919
67 5KEW 6SB 9.57447
68 1QPB PYM 9.76909
69 3THR C2F 9.89761
70 2RC5 FAD 10.1911
71 4DOL PLM 10.5991
72 2VK4 TPP 11.1901
73 1T3Q MCN 13.0952
74 2OI2 DP6 13.3562
75 1LCK GLU GLY GLN PTR GLN PRO GLN PRO ALA 13.7143
76 4UYE 9F9 14.4068
77 1O44 852 15.7407
78 2CK3 ADP 26
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