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Receptor
PDB id Resolution Class Description Source Keywords
6BII 2 Å EC: 1.1.1.26 CRYSTAL STRUCTURE OF PYROCOCCUS YAYANOSII GLYOXYLATE HYDROXY REDUCTASE IN COMPLEX WITH NADP AND MALONATE (RE-REFINEMENT PYROCOCCUS YAYANOSII (STRAIN CH1 / JCMORGANISM_TAXID: 529709 HYDROXYPYRUVATE REDUCTASE GHRB OXIDOREDUCTASE
Ref.: NEW INSIGHTS INTO THE MECHANISM OF SUBSTRATES TRAFF GLYOXYLATE/HYDROXYPYRUVATE REDUCTASES. SCI REP V. 6 20629 2016
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP A:401;
B:401;
Valid;
Valid;
none;
none;
Ki = 2000 uM
743.405 C21 H28 N7 O17 P3 c1cc(...
GOL A:403;
B:404;
A:405;
A:404;
B:403;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6BII 2 Å EC: 1.1.1.26 CRYSTAL STRUCTURE OF PYROCOCCUS YAYANOSII GLYOXYLATE HYDROXY REDUCTASE IN COMPLEX WITH NADP AND MALONATE (RE-REFINEMENT PYROCOCCUS YAYANOSII (STRAIN CH1 / JCMORGANISM_TAXID: 529709 HYDROXYPYRUVATE REDUCTASE GHRB OXIDOREDUCTASE
Ref.: NEW INSIGHTS INTO THE MECHANISM OF SUBSTRATES TRAFF GLYOXYLATE/HYDROXYPYRUVATE REDUCTASES. SCI REP V. 6 20629 2016
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 6BII Ki = 2000 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 6BII Ki = 2000 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 2DBQ - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
3 2DBZ - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 5AOV - GLV C2 H2 O3 C(=O)C(=O)....
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 4NU5 - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
2 4E5P - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
3 4EBF - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
4 3BAZ - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
5 6BII Ki = 2000 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
6 2GCG - NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
7 2DBZ - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6BII; Ligand: NAP; Similar sites found with APoc: 1000
This union binding pocket(no: 1) in the query (biounit: 6bii.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 1FWV SGA MAG FUC None
2 2BOS GLA GAL GLC None
3 2BOS GLA GAL GLC NBU None
4 1O6Z NAD 0.990099
5 2ZB3 NDP 1.2012
6 3HVJ 705 1.35747
7 4MP8 MLI 1.5015
8 4MP8 NAD 1.5015
9 4BVA NDP 1.5015
10 3QJ4 FAD 1.5015
11 4BVA T3 1.5015
12 4QS9 BGC 1.5015
13 4A0S NAP 1.5015
14 1PN0 FAD 1.5015
15 3X0V FAD 1.5015
16 1ORR NAD 1.5015
17 1PN0 IPH 1.5015
18 1H9A NAP 1.5015
19 5FJN BE2 1.5015
20 5FJN FAD 1.5015
21 5NUE NAD 1.50602
22 5NUF NAD 1.50602
23 2PZM NAD 1.51515
24 2PZM UDP 1.51515
25 2PV7 NAD 1.67785
26 3K5I AIR 1.8018
27 1Q0H NDP 1.8018
28 1Q0H FOM 1.8018
29 1YB5 NAP 1.8018
30 4G5H NAP 1.8018
31 4G5H UD7 1.8018
32 6FHO FAD 1.8018
33 4JDR FAD 1.8018
34 2X6T NAP 1.8018
35 1VJT NAD 1.8018
36 4MOP 2H5 1.8018
37 5OC1 FAD 1.8018
38 3M89 GSP 1.8018
39 2CUN 3PG 1.8018
40 6A0S HSE 1.80723
41 6A0S NDP 1.80723
42 1SOW NAD 1.82927
43 3HB5 NAP 1.83486
44 5MIT NAP 1.83486
45 5MIT FAD 1.83486
46 2AE2 PTO 1.92308
47 2AE2 NAP 1.92308
48 1NFQ NAI 1.92308
49 1EQ2 NAP 1.93548
50 4YAC NAI 2.0202
51 4YAG NAI 2.07612
52 1E5Q NDP 2.1021
53 1F8F NAD 2.1021
54 4B63 ORN 2.1021
55 4B63 NAP 2.1021
56 4B63 FAD 2.1021
57 1SB8 NAD 2.1021
58 1SB8 UD2 2.1021
59 1KEW NAD 2.1021
60 3ULK NDP 2.1021
61 3K7M FAD 2.1021
62 5DF1 NAP 2.1021
63 5DF1 58X 2.1021
64 5MBX FAD 2.1021
65 5MBX SP5 2.1021
66 5JCM NAD 2.1021
67 5JCM ISD 2.1021
68 5JCM FAD 2.1021
69 5GUD NDP 2.1021
70 1KEW TYD 2.1021
71 5O2N FLC 2.1021
72 5JWC FAD 2.1021
73 4BJZ P3A 2.1021
74 4BJZ FAD 2.1021
75 5GUD 2IT 2.1021
76 5GUD CIT 2.1021
77 3NB0 G6P 2.1021
78 5K0A FAD 2.12121
79 3FPZ AHZ 2.14724
80 6FP4 E1T 2.17391
81 6FP4 FAD 2.17391
82 3NGL NAP 2.17391
83 2Q0L NAP 2.2508
84 2Q0L FAD 2.2508
85 5OJI NAP 2.30769
86 5OJI ISN 2.30769
87 3Q3C NAD 2.34114
88 2WSB NAD 2.3622
89 4YCA NDP 2.38095
90 1UXG NAD 2.4024
91 1UXG FUM 2.4024
92 2DM6 IMN 2.4024
93 2DM6 NAP 2.4024
94 5A1T NAI 2.4024
95 5A1T OXM 2.4024
96 4MDH NAD 2.4024
97 5NMX NAP 2.4024
98 5J5Z FAD 2.4024
99 3OA2 NAD 2.4024
100 1FEC FAD 2.4024
101 2IID PHE 2.4024
102 2IID FAD 2.4024
103 5NMX FAD 2.4024
104 5VN0 FAD 2.4024
105 5MDH NAD 2.4024
106 1YQZ FAD 2.4024
107 2F5Z FAD 2.4024
108 3NYC FAD 2.4024
109 3NYC IAR 2.4024
110 3LU1 NAD 2.4024
111 5Z75 NAD 2.4024
112 5VN0 NAI 2.4024
113 1X87 NAD 2.4024
114 5XWC 8GL 2.4024
115 5XWC NAP 2.4024
116 5XWC 2IT 2.4024
117 4Q9N NAI 2.4024
118 6AIN FAD 2.4024
119 6B74 BEN 2.4024
120 4ZVV GN0 2.40964
121 4ZVV NAD 2.40964
122 2AQJ FAD 2.41636
123 2AQJ TRP 2.41636
124 6GAS FAD 2.41692
125 3SQP FAD 2.51046
126 2BGM NAJ 2.51799
127 2ZB4 5OP 2.52101
128 2ZB4 NAP 2.52101
129 1LDN NAD 2.53165
130 5WQP NAP 2.5641
131 5WQP NCA 2.5641
132 3MAG SAH 2.60586
133 2GDZ NAD 2.62172
134 5NM7 GLY 2.63158
135 4FWE FAD 2.63819
136 5LD5 NAD 2.7027
137 3B1J NAD 2.7027
138 3QV1 NAD 2.7027
139 1X14 NAD 2.7027
140 1RM4 NDP 2.7027
141 3B20 NAD 2.7027
142 2D2I NAP 2.7027
143 1REO FAD 2.7027
144 1BZL GCG 2.7027
145 1BZL FAD 2.7027
146 5MLR NAP 2.7027
147 5MLR GRQ 2.7027
148 5TS5 FAD 2.7027
149 1GY8 NAD 2.7027
150 1EK6 NAI 2.7027
151 1EK6 UPG 2.7027
152 5EOW FAD 2.7027
153 4UP3 NDP 2.7027
154 2QA1 FAD 2.7027
155 3NTA FAD 2.7027
156 1Q9I TEO 2.7027
157 1Q9I FAD 2.7027
158 1E1M FAD 2.7027
159 1E1M NAP 2.7027
160 2FN1 SAL 2.7027
161 3NKS FAD 2.7027
162 3NTD FAD 2.7027
163 1Q1R FAD 2.7027
164 3V1U NAD 2.7027
165 3NT6 FAD 2.7027
166 3LZW NAP 2.71084
167 3LZW FAD 2.71084
168 2GLX NDP 2.71084
169 3AFN NAP 2.71318
170 4XQC NAD 2.73684
171 4XQC 13D 2.73684
172 2CVQ NDP 2.75229
173 5A96 GTP 2.81124
174 1RP0 AHZ 2.8169
175 3WXB NDP 2.86738
176 1BDB NAD 2.88809
177 5D4V SAH 2.98507
178 5CAE SIN 3.003
179 5CAE COA 3.003
180 3A06 NDP 3.003
181 1RYD NDP 3.003
182 3A06 FOM 3.003
183 1OC2 NAD 3.003
184 1OC2 TDX 3.003
185 5A04 BGC 3.003
186 1BXK NAD 3.003
187 3AYI FAD 3.003
188 3AYI HCI 3.003
189 5X68 FAD 3.003
190 6A3J SOE 3.003
191 4U7W NDP 3.003
192 5A04 NDP 3.003
193 4X9M FAD 3.003
194 1U3D ANP 3.003
195 5ZYN FAD 3.003
196 6A3J NAI 3.003
197 2OG2 MLI 3.003
198 3SSO SAH 3.003
199 1HDG NAD 3.01205
200 5Z2F NAP 3.01887
201 1PZG A3D 3.02115
202 1D7O TCL 3.0303
203 1D7O NAD 3.0303
204 6GNC FAD 3.06122
205 1LC3 NAD 3.06122
206 4TQG NDP 3.09598
207 1OMO NAD 3.10559
208 4OHU NAD 3.11419
209 4OHU 2TK 3.11419
210 2A92 NAI 3.11526
211 5YSS NAD 3.125
212 2P3V SRT 3.125
213 4CJX NAP 3.1348
214 1ZQ9 SAM 3.15789
215 1PA9 CSN 3.16901
216 2CFC NAD 3.2
217 3O9Z NAD 3.20513
218 3O9Z AKG 3.20513
219 5T2U NAP 3.22581
220 5NII FAD 3.23625
221 2JAH NDP 3.23887
222 2JAP NDP 3.23887
223 3HAD NAD 3.24675
224 1XHC FAD 3.26975
225 1KYQ NAD 3.28467
226 5L4L NAP 3.28947
227 1AE1 NAP 3.2967
228 5YU3 PRO 3.3033
229 5YU3 NAD 3.3033
230 5KKA 6V0 3.3033
231 1GV0 NAD 3.3033
232 5UR0 NAD 3.3033
233 3L4S NAD 3.3033
234 1O0S NAI 3.3033
235 4B7X NAP 3.3033
236 3L4S 3PG 3.3033
237 1K3T BRZ 3.3033
238 5N0J FAD 3.3033
239 4AP3 FAD 3.3033
240 4AP3 NAP 3.3033
241 1YKJ FAD 3.3033
242 1YKJ PHB 3.3033
243 1DJN ADP 3.3033
244 4EMI NAD 3.3033
245 6C4N NAP 3.3033
246 4EMI FAD 3.3033
247 1D4D FAD 3.3033
248 4GLL NAD 3.3033
249 1QO8 FAD 3.3033
250 2B9W FAD 3.3033
251 1Q19 SSC 3.3033
252 3DAG FEG 3.3033
253 4CNK FAD 3.3033
254 2DKH FAD 3.3033
255 2BRY FAD 3.3033
256 2DKH 3HB 3.3033
257 3WMX NAD 3.3033
258 1W73 NAP 3.31126
259 1W8D NAP 3.31126
260 1CER NAD 3.32326
261 1EBF NAD 3.35196
262 2HJR APR 3.35366
263 6BWL NAD 3.35366
264 5GZ6 7C3 3.37423
265 5GZ6 NDP 3.37423
266 6F97 FAD 3.38983
267 4OSP NAP 3.42205
268 5FEU NAP 3.43643
269 1MO9 FAD 3.44168
270 1MO9 KPC 3.44168
271 1U7T TDT 3.44828
272 1U7T NAD 3.44828
273 3A4V NAD 3.47003
274 3A4V PYR 3.47003
275 3A28 NAD 3.48837
276 1VM6 NAD 3.50877
277 5AYV KPL 3.55987
278 5AYV NAP 3.55987
279 2CDU ADP 3.6036
280 2NU8 COA 3.6036
281 1LDM NAD 3.6036
282 3CIF NAD 3.6036
283 2Q1S NAI 3.6036
284 5JY6 NAD 3.6036
285 2IVD FAD 3.6036
286 5GSN FAD 3.6036
287 5GSN NAP 3.6036
288 5GSN MMZ 3.6036
289 2Y6Q FAD 3.6036
290 2Y6Q I7T 3.6036
291 3UOY NAP 3.6036
292 3UOY FAD 3.6036
293 4RSL FAD 3.6036
294 1U8X NAD 3.6036
295 1WPQ NAD 3.6036
296 2RGJ FAD 3.6036
297 2R4J FAD 3.6036
298 2R4J 13P 3.6036
299 5BUK FAD 3.6036
300 2CDU FAD 3.6036
301 3CIF G3H 3.6036
302 1P31 EPU 3.6036
303 2JB2 PHE 3.6036
304 2JB2 FAD 3.6036
305 5HXI FAD 3.6036
306 5HXI 5HN 3.6036
307 4JJF FE9 3.6036
308 3GMB FAD 3.6036
309 2WMO GTP 3.6036
310 2RGH FAD 3.6036
311 3GDN HBX 3.6036
312 1SZ2 BGC 3.61446
313 1YJQ NAP 3.63036
314 5JE8 NAD 3.64238
315 1ZBQ NAD 3.66972
316 3RFV NAI 3.74532
317 3RFV 15L 3.74532
318 1O94 ADP 3.75
319 5J60 FAD 3.75
320 1GZ6 NAI 3.76176
321 5OCM NAP 3.78007
322 5X20 NAD 3.84615
323 4NTO 1PW 3.86473
324 1HYH NAD 3.8835
325 1G0N NDP 3.88693
326 1G0N PHH 3.88693
327 1EJ0 SAM 3.88889
328 5FFF NAP 3.89105
329 5FFF 5XC 3.89105
330 1H2B NAJ 3.9039
331 1KOL NAD 3.9039
332 1KEV NDP 3.9039
333 5ZI2 ADP 3.9039
334 5ZI2 NAD 3.9039
335 3CMC NAD 3.9039
336 3OJO NAD 3.9039
337 1WDK NAD 3.9039
338 4Z0H NAD 3.9039
339 3KLJ FAD 3.9039
340 4EUE NAI 3.9039
341 5WGR FAD 3.9039
342 4EIP FAD 3.9039
343 5BVA FAD 3.9039
344 1GET NAP 3.9039
345 1GET FAD 3.9039
346 5BRT FAD 3.9039
347 5BRT CH9 3.9039
348 4BV6 FAD 3.9039
349 3ITJ CIT 3.9039
350 2C29 NAP 3.9039
351 3GD4 FAD 3.9039
352 6HKE MLT 3.9039
353 6HKE LMR 3.9039
354 5YAP 8S0 3.9039
355 3GD4 NAD 3.9039
356 4REP FAD 3.9039
357 5J7X FAD 3.9039
358 4R1S NAP 3.9039
359 5MQ6 NDP 3.9039
360 3ITJ FAD 3.9039
361 5YAP NAI 3.9039
362 1E6E FAD 3.90625
363 1J0X NAD 3.91566
364 1B8U OAA 3.95137
365 1B8U NAD 3.95137
366 1V35 NAI 3.95137
367 5I7A 68Q 3.98773
368 1X7D ORN 4
369 1X7D NAD 4
370 1JA9 NDP 4.0146
371 5THQ NDP 4.04412
372 6F9Q NAD 4.04412
373 4ZGR NGA GAL 4.04858
374 4DMG SAM 4.07125
375 1C3V NDP 4.08163
376 2BD0 NAP 4.09836
377 1PR9 NAP 4.09836
378 3D3W NAP 4.09836
379 1N9G NAP 4.14508
380 5JDI NAP 4.16667
381 4CM9 NAP 4.16667
382 5K6A NAP 4.16667
383 4CLR NAP 4.16667
384 4CMI NAP 4.16667
385 5JDC NAP 4.16667
386 5JCJ NAP 4.16667
387 3BMN NAP 4.16667
388 3JQ9 NAP 4.16667
389 3JQG NAP 4.16667
390 3BMO NAP 4.16667
391 3BMQ NAP 4.16667
392 3JQF NAP 4.16667
393 4CM4 NAP 4.16667
394 3JQA NAP 4.16667
395 4CM8 NAP 4.16667
396 2YY7 NAD 4.16667
397 3JQ7 NAP 4.16667
398 4CLO NAP 4.16667
399 4CME NAP 4.16667
400 3JQB NAP 4.16667
401 3JQ8 NAP 4.16667
402 3O26 NDP 4.18006
403 5GT9 NAP 4.18251
404 4JK3 NAD 4.2042
405 4GKV NAD 4.2042
406 3V1Y NAD 4.2042
407 2QRK AMP 4.2042
408 1GUZ NAD 4.2042
409 1I2B USQ 4.2042
410 1I2B NAD 4.2042
411 1I2B UPG 4.2042
412 2B4R NAD 4.2042
413 2B4R AES 4.2042
414 1UWK URO 4.2042
415 1UWK NAD 4.2042
416 1YS4 NAP 4.2042
417 2V6G NAP 4.2042
418 3U4C NDP 4.2042
419 4PIV NDP 4.2042
420 1H82 GZZ 4.2042
421 1H82 FAD 4.2042
422 2DKN NAI 4.2042
423 4K5S PM0 4.2042
424 4Y1B NAP 4.2042
425 3S5W NAP 4.2042
426 3S5W FAD 4.2042
427 2HQM FAD 4.2042
428 2F5X ASP 4.2042
429 2RAB NAD 4.2042
430 2RAB FAD 4.2042
431 1ZK7 FAD 4.2042
432 5TUF TDC 4.2042
433 5TUF FAD 4.2042
434 5EZ7 FAD 4.2042
435 4K5S FAD 4.2042
436 5YRG BGC GLC 4.22535
437 5YRF GLC GLC 4.22535
438 4PLT NAI 4.22961
439 4PLT OXM 4.22961
440 2ZAT NAP 4.23077
441 1GAD NAD 4.24242
442 4B4U NAP 4.29043
443 1J5P NAD 4.34783
444 2Q46 NAP 4.34783
445 3ORF NAD 4.38247
446 1ZK4 NAP 4.38247
447 1ZK4 AC0 4.38247
448 4WAS NAP 4.3956
449 4G05 JZ3 4.4164
450 1SAY PYR 4.43213
451 3H8V ATP 4.45205
452 4OOE FOM 4.45545
453 4OOE NDP 4.45545
454 2VZ0 D64 4.47761
455 2VZ0 NAP 4.47761
456 2WD7 NAP 4.47761
457 2FZW NAD 4.5045
458 6AA8 NAD 4.5045
459 5BJX NAD 4.5045
460 5BJX UDP 4.5045
461 2IXB NAD 4.5045
462 1LVL NAD 4.5045
463 4ZCC FAD 4.5045
464 4ZCC NAI 4.5045
465 1V59 FAD 4.5045
466 3ZNN FAD 4.5045
467 3ZNN 4WL 4.5045
468 1PJS NAD 4.5045
469 1V59 NAD 4.5045
470 5W3K NDP 4.5045
471 5W3K 9TY 4.5045
472 5NA1 FAD 4.5045
473 5UAO FAD 4.5045
474 4YKG FAD 4.5045
475 4USQ FAD 4.5045
476 5KVS NAP 4.5045
477 1TDF FAD 4.5045
478 2IXB A2G 4.5045
479 4YKG NAD 4.5045
480 1KNR FAD 4.5045
481 4Z24 FAD 4.5045
482 5Y1G AKB 4.57317
483 5Y1G NAD 4.57317
484 5EPO NAP 4.58015
485 3OID NDP 4.65116
486 1JNR FAD 4.66667
487 5GWT SIN 4.67626
488 5GWT NAD 4.67626
489 1GEG NAD 4.6875
490 1EZ4 NAD 4.71698
491 2HK9 NAP 4.72727
492 2HK9 ATR 4.72727
493 4PLG NAI 4.79042
494 4PLG OXM 4.79042
495 4NBU NAI 4.8
496 1MUU NAD 4.8048
497 1MV8 NAD 4.8048
498 2YVJ NAI 4.8048
499 4DPL NAP 4.8048
500 3L9W AMP 4.8048
501 1U1I NAD 4.8048
502 2XVE FAD 4.8048
503 4JBI NDP 4.8048
504 3L9W GSH 4.8048
505 3UCL CYH 4.8048
506 3UCL FAD 4.8048
507 3UCL NAP 4.8048
508 6DNT NAD 4.8048
509 2YVF FAD 4.8048
510 2YVF NAD 4.8048
511 1CZA G6P 4.8048
512 5KMS NAD 4.8048
513 1RYI GOA 4.8048
514 4R5M 4NO 4.8048
515 3THR C2F 4.8048
516 1LJ8 NAD 4.8048
517 4R5M NAP 4.8048
518 4TM3 FAD 4.8048
519 1RYI FAD 4.8048
520 4EDF UPG 4.8048
521 2YVJ FAD 4.8048
522 1M2W NAD 4.8048
523 5KMS FAD 4.8048
524 3QWB NDP 4.8048
525 1CZA GLC 4.8048
526 2XVF FAD 4.8048
527 1V6A TRE 4.81928
528 1O5I NAD 4.81928
529 5XWV 8H6 4.83871
530 5XWV NDP 4.83871
531 5EES NAP 4.8583
532 4RDH AMP 4.86111
533 4RDI ATP 4.86111
534 1IY8 NAD 4.86891
535 5K4W THR 4.98442
536 5K4W NAI 4.98442
537 4NBT NAD 5
538 1RV0 NDG 5
539 3CTY FAD 5.01567
540 5JCA FAD 5.06329
541 5JCA NDP 5.06329
542 4D79 ATP 5.07246
543 2VYN NAD 5.1051
544 3T31 DCQ 5.1051
545 3T31 FAD 5.1051
546 2Q1W NAD 5.1051
547 4W6Z 8ID 5.1051
548 2J5V PCA 5.1051
549 1DSS NAD 5.1051
550 4O0L NDP 5.1051
551 3QVP FAD 5.1051
552 4UZI IMD 5.1051
553 2C5A NAD 5.1051
554 2C5A GDC 5.1051
555 2J5V RGP 5.1051
556 3RJ5 NAD 5.11811
557 4FN4 NAD 5.11811
558 4M52 FAD 5.15021
559 4M52 M52 5.15021
560 2A8X FAD 5.17241
561 4ITU NAI 5.20446
562 4ITU 1HS 5.20446
563 1LUA NAP 5.22648
564 5G4L NDP 5.24476
565 1E7S NAP 5.29595
566 3ZV6 4HB 5.33808
567 3ZV6 NAD 5.33808
568 5U5N NAD 5.37634
569 2CDC XYP 5.40541
570 2CDC XYS 5.40541
571 1VKO NAD 5.40541
572 1ZH8 NAP 5.40541
573 3H9E NAD 5.40541
574 2CDC NAP 5.40541
575 2JHP SAH 5.40541
576 4KVL PLM 5.40541
577 3AXB PRO 5.40541
578 3AXB FAD 5.40541
579 3ZOA ACR 5.40541
580 6C4M NAP 5.40541
581 3ICT ADP 5.40541
582 3ICS ADP 5.40541
583 3ICR FAD 5.40541
584 3ICS FAD 5.40541
585 2QS8 MET 5.40541
586 5O4J 9KH 5.40541
587 5O4J PJL 5.40541
588 5O4J SAH 5.40541
589 3ICT FAD 5.40541
590 4FC7 COA 5.41516
591 4FC7 NAP 5.41516
592 2DC1 NAD 5.50847
593 3JYN NDP 5.53846
594 2JL1 NAP 5.57491
595 4EMJ FAD 5.60748
596 4XB2 NDP 5.70571
597 4XB2 HSE 5.70571
598 1GZ4 ATP 5.70571
599 1GQ2 NAP 5.70571
600 2B5W NAP 5.70571
601 2GN4 NDP 5.70571
602 2GN4 UD1 5.70571
603 3CBG SAH 5.70571
604 1E3W NAD 5.74713
605 1NVM NAD 5.76923
606 1E6W NAD 5.76923
607 5KUT GDP 5.82011
608 1VL0 NAI 5.82192
609 3O03 NAP 5.84192
610 1PL6 NAD 5.89888
611 1PL6 572 5.89888
612 4EA7 JB2 5.90909
613 4EA7 COA 5.90909
614 1RM0 D6P 6.00601
615 1RM0 NAI 6.00601
616 2J8Z NAP 6.00601
617 2VVL FAD 6.00601
618 2VVM FAD 6.00601
619 2WET FAD 6.00601
620 5KOX RFP 6.00601
621 5KOX FAD 6.00601
622 3FG2 FAD 6.00601
623 3H5N ATP 6.00601
624 3RC1 NAP 6.00601
625 3RC1 TLO 6.00601
626 3QFA FAD 6.03448
627 5OJL TXP 6.04027
628 6BQ6 TER 6.0423
629 4KWI 1TJ 6.08365
630 4KWI NAP 6.08365
631 1EDO NAP 6.14754
632 1MXH DHF 6.15942
633 1MXH NAP 6.15942
634 5L53 NAP 6.17284
635 1DRV A3D 6.22711
636 5L95 AMP 6.25
637 6GNA FAD 6.25
638 3LXD FAD 6.26506
639 6F3N NAD 6.30631
640 6F3N ADN 6.30631
641 2DFV NAD 6.30631
642 1H6C NDP 6.30631
643 6F3M NAD 6.30631
644 1H6C SIN 6.30631
645 6ER9 FAD 6.30631
646 6ER9 NAP 6.30631
647 2Z3Y F2N 6.30631
648 1OBB NAD 6.30631
649 4IV9 FAD 6.30631
650 9LDT NAD 6.3253
651 9LDB NAD 6.3253
652 1WOQ BGC 6.36704
653 2RI1 GLP 6.38298
654 2EWM NAD 6.4257
655 4GUS FAD 6.45161
656 4GUT FAD 6.45161
657 4HSU FAD 6.45161
658 1UDB UFG 6.50888
659 1UDB NAD 6.50888
660 4K26 NDP 6.52174
661 4K26 SFF 6.52174
662 5B4T 3HR 6.53846
663 5B4T NAD 6.53846
664 2PK3 A2R 6.54206
665 1LLU NAD 6.60661
666 1DLJ NAI 6.60661
667 1DLJ UGA 6.60661
668 1YKF NAP 6.60661
669 4KOA NDP 6.60661
670 3ETG GTP 6.60661
671 3ETG GLU 6.60661
672 3LAD FAD 6.60661
673 4J1Q NDP 6.60661
674 4RF2 NAP 6.60661
675 3I6I NDP 6.60661
676 6C4T NA7 6.60661
677 3KO8 NAD 6.60661
678 3TTN SPD 6.60661
679 3ETG NDP 6.60661
680 1GTE FAD 6.60661
681 2DT5 NAD 6.63507
682 5LPG 71V 6.70732
683 1HYE NAP 6.70927
684 3VPH NAD 6.77419
685 3VPH OXM 6.77419
686 5U5G NAP 6.77966
687 1XSE NDP 6.77966
688 3NUG NAD 6.88259
689 6CEP OXM 6.88623
690 6CEP NAD 6.88623
691 1LTH NAD 6.89655
692 3GFB NAD 6.90691
693 5EIN NAP 6.90691
694 6F7L FAD 6.90691
695 2DTX BMA 6.90691
696 1Z45 NAD 6.90691
697 1UP7 NAD 6.90691
698 3CGB FAD 6.90691
699 4J7U YTZ 6.94444
700 4J7U NAP 6.94444
701 1HDR NAD 6.96721
702 3CH6 311 6.99301
703 3CH6 NAP 6.99301
704 1FK8 NAD 7.00389
705 3OZ2 FAD 7.0529
706 1Z6Z NAP 7.0922
707 4OM8 NAD 7.11974
708 3F8D FAD 7.12074
709 1T26 NAI 7.14286
710 1T26 GBD 7.14286
711 2GAG NAD 7.14286
712 2GAG FOA 7.14286
713 2GAG FAD 7.14286
714 3SJU NDP 7.16846
715 1I36 NAP 7.19697
716 1R37 NAD 7.20721
717 5TTJ FAD 7.20721
718 3H4V NAP 7.20721
719 3H4V DVP 7.20721
720 2YG3 FAD 7.20721
721 4NTD FAD 7.20721
722 2C7G FAD 7.20721
723 2C7G ODP 7.20721
724 4QED NAP 7.25806
725 1X1T NAD 7.30769
726 1NVT NAP 7.31707
727 1P77 ATR 7.35294
728 2Q7V FAD 7.38462
729 1E3I CXF 7.50751
730 1CF2 NAP 7.50751
731 4JNA FAD 7.50751
732 3WGT FAD 7.50751
733 3WGT QSC 7.50751
734 6EL3 NAP 7.50751
735 5X9D 80F 7.56579
736 5O98 NAP 7.57098
737 2RH4 EMO 7.58123
738 2IZ1 ATR 7.59494
739 3RKR NAP 7.63359
740 5OOH NAP 7.76699
741 5OOH 9ZZ 7.76699
742 4NBW NAD 7.7821
743 4D42 NAP 7.80142
744 4D42 W0I 7.80142
745 3AY6 BGC 7.80669
746 3AY6 NAI 7.80669
747 1D1T NAD 7.80781
748 4L8V NAP 7.80781
749 5Y77 FAD 7.80781
750 4ZRN NAD 7.80781
751 4ZRN UPG 7.80781
752 5G3U FDA 7.80781
753 2GV8 FAD 7.80781
754 1DIG NAP 7.80781
755 2GVC FAD 7.80781
756 5G3U ITW 7.80781
757 3AB1 FAD 7.80781
758 1DIG L37 7.80781
759 5MSO NAP 7.80781
760 1VQW FAD 7.80781
761 1QMG APX 7.82443
762 2Q2V NAD 7.84314
763 2YYY NAP 7.87172
764 4J56 FAD 7.89474
765 2YIP YIO 7.97101
766 2FR1 NDP 8.02469
767 3AD8 NAD 8.08081
768 3AD8 FAD 8.08081
769 3AD8 PYC 8.08081
770 5VKT NAP 8.10811
771 5U8U FAD 8.10811
772 1C0I BE2 8.10811
773 1C0I FAD 8.10811
774 1RJW ETF 8.10811
775 2NVK FAD 8.10811
776 2NVK NAP 8.10811
777 3KU0 ADE 8.10811
778 4USR FAD 8.10811
779 5T9E NAP 8.11808
780 1NYT NAP 8.11808
781 3SJ7 NDP 8.33333
782 1ZEM NAD 8.39695
783 1KJ8 GAR 8.40841
784 5MZI FYK 8.40841
785 5MZI FAD 8.40841
786 1N1G BCP 8.40841
787 1A99 PUT 8.40841
788 3IHG FAD 8.40841
789 4U8P UDP 8.40841
790 4U8P FDA 8.40841
791 5T9F NAP 8.48709
792 5T9F TYR 8.48709
793 3TN7 NJP 8.56031
794 1P0F NAP 8.57909
795 1M0S CIT 8.6758
796 2NPX NAD 8.70871
797 4YRY NAD 8.70871
798 1Y8Q ATP 8.70871
799 2E5V FAD 8.70871
800 4YRY FAD 8.70871
801 5WHU SIA GAL GLC 8.72483
802 5XVH NAP 8.82353
803 4O1M NAD 8.88889
804 1U3G ADP 8.99471
805 3ABI NAD 9.00901
806 4RQU NAD 9.00901
807 5O9F 9ON 9.00901
808 5O9F NAD 9.00901
809 1NPD NAD 9.00901
810 1VI2 NAD 9.00901
811 1TB4 PEJ 9.00901
812 4TXI FAD 9.00901
813 6GAR FAD 9.00901
814 3ICC NAP 9.01961
815 2HMT NAI 9.02778
816 2B4Q NAP 9.05797
817 3WLE NAD 9.09091
818 3QWI CUE 9.25926
819 3QWI NAP 9.25926
820 3TWO NDP 9.30931
821 2JHF NAD 9.30931
822 1U3U BNF 9.30931
823 1U3U NAD 9.30931
824 3E1T FAD 9.30931
825 3VZS NAP 9.33852
826 3VZS CAA 9.33852
827 3LN9 FLC 9.35252
828 1VL8 NAP 9.3633
829 5FI3 NAP 9.60961
830 1Z82 NDP 9.60961
831 2GMH FAD 9.60961
832 4KQW NAP 9.60961
833 5OVL NAP 9.66667
834 6FLZ MMA 9.72222
835 1WMA NDP 9.78261
836 1WMA AB3 9.78261
837 1XCL SAH 9.78723
838 5Z2L NDP 9.79592
839 5TC4 NAD 9.81013
840 1Q7B NAP 9.83607
841 2AG8 NAP 9.88593
842 1F06 NDP 9.90991
843 1F06 2NP 9.90991
844 3CGD FAD 9.90991
845 5HSA FAS 9.90991
846 3CGD COA 9.90991
847 3CGD NAD 9.90991
848 4XDY NAI 9.90991
849 5ZBC FAD 9.90991
850 6CI9 NAP 9.90991
851 5E4R NAP 9.90991
852 2ZXI FAD 9.90991
853 4XDZ NDP 9.90991
854 3DTU DXC 9.92366
855 5UAV NDP 9.93789
856 5UAV TFB 9.93789
857 2QZZ EMF 10.0629
858 2QZZ NAP 10.0629
859 1XHL NDP 10.101
860 1XHL TNE 10.101
861 3GEG NAD 10.1215
862 5TWB FAD 10.1744
863 1H5Q NAP 10.1887
864 4J4H NAI 10.2102
865 4J4H 1J1 10.2102
866 1YQD NAP 10.2102
867 4J36 FAD 10.2102
868 4J36 1HR 10.2102
869 3G5S FAD 10.2102
870 5I39 FAD 10.2102
871 4XZ3 COA 10.4348
872 4XYM COA 10.4348
873 4Y9D NAI 10.4918
874 4HXY NDP 10.5023
875 3TTM PUT 10.5105
876 1IK4 PGH 10.5263
877 3WV8 ATP 10.5505
878 4D3F NAP 10.6452
879 1XKQ NDP 10.7143
880 1RKX NAD 10.8108
881 4URF NAD 10.8871
882 5YEC ATP 10.9244
883 5O42 9JW 10.9489
884 5O42 BGC 10.9489
885 5O42 NAD 10.9489
886 5H81 NAP 11.1111
887 2I3G NAP 11.1111
888 1CDO NAD 11.1111
889 1R6D NAD 11.1111
890 1R6D DAU 11.1111
891 4II2 ATP 11.1111
892 2CUL FAD 11.2069
893 5L4S NAP 11.3208
894 5L4S 6KX 11.3208
895 3WQQ IB3 11.4114
896 3WQQ NDP 11.4114
897 4KP7 NAP 11.4114
898 4KP7 1UQ 11.4114
899 5YB7 ORN 11.4114
900 5YB7 FAD 11.4114
901 1WP4 NDP 11.4187
902 1N5D NDP 11.4583
903 5Y8L NAD 11.5254
904 5Y8L HUI 11.5254
905 3C1O NAP 11.5265
906 1P1C SAH 11.5578
907 1GR0 NAD 11.7117
908 5OVK NDP 11.7188
909 2AHR NAP 11.9691
910 4NTC FAD 12.012
911 4TSK NDP 12.012
912 4YT4 FE9 12.012
913 3BIB PSF 12.069
914 2ZJ1 ARJ 12.3123
915 2ZJ1 NAD 12.3123
916 1V8B NAD 12.3123
917 4IF4 BEF 12.5
918 5M67 3D1 12.6126
919 5M67 NAD 12.6126
920 5M67 ADE 12.6126
921 1YY5 FAD 12.6126
922 1RSG FAD 12.6126
923 5DOZ NDP 12.6126
924 3VYW SAM 12.6623
925 3B1F NAD 12.7586
926 5ODQ FAD 12.8571
927 3OND ADN 12.9129
928 3OND NAD 12.9129
929 2EV9 SKM 12.9278
930 2EV9 NAP 12.9278
931 4D04 NAP 13.2132
932 4D04 FAD 13.2132
933 1XG5 NAP 13.2616
934 5BSH PRO 13.3574
935 5YRJ BGC GLC 13.3803
936 5YRM BGC GLC 13.3803
937 2VHW NAI 13.5135
938 1A5Z NAD 13.5135
939 3NJ4 NAD 13.8138
940 3NJ4 AFX 13.8138
941 3FWN ATR 13.8138
942 1WVG APR 13.8138
943 1W6U NAP 13.9073
944 2WPF FAD 14.1141
945 2WPF WPF 14.1141
946 4E13 NAD 14.1343
947 1F8G NAD 14.7147
948 5TOW ADN 14.7147
949 5TOW NAI 14.7147
950 4MIG G3F 15.015
951 4CQM NAP 15.1639
952 2CVZ NDP 15.2249
953 2OOR NAD 15.3153
954 1L7E NAI 15.3153
955 1NM5 NAD 15.3153
956 4IDC NDP 15.3614
957 4IDC 1XX 15.3614
958 1GPE FAD 15.6156
959 4RVU NDP 15.9159
960 1LSS NAD 16.4286
961 2VT3 ATP 17.6744
962 2GZ3 NAP 17.7177
963 2G5C NAD 18.018
964 1PGP 6PG 18.018
965 1FL2 FAD 18.7097
966 1GEE NAD 19.1571
967 1C1X NAD 19.2192
968 1BXG NAD 19.2192
969 1BW9 NAD 19.2192
970 1PS9 NAP 19.8198
971 1PS9 FAD 19.8198
972 3GGO ENO 20.3822
973 3GGO NAI 20.3822
974 1JAY NAP 20.7547
975 3WBF NAP 21.021
976 3WBF API 21.021
977 4OPC PGT 21.021
978 4OPC FDA 21.021
979 1NNU NAD 21.6667
980 1NNU TCT 21.6667
981 5N2I NAP 21.9828
982 3RNM FAD 22.4138
983 2F1K NAP 22.9391
984 4YSX FAD 23.0769
985 5ZZ6 NAD 24.0385
986 5ZZ6 ADP 24.0385
987 2VOH CIT 26.9231
988 1OAA OAA 29.3436
989 4XYB NDP 32.4324
990 2GSD NAD 36.036
991 5Z21 NAI 36.3129
992 2O4C NAD 37.5375
993 4ZGS NAD 38.1381
994 1J49 NAD 39.6396
995 2NAD NAD 39.6396
996 5DN9 NAD 40.8408
997 1HKU NAD 43.8438
998 3KB6 NAD 46.7066
999 5Z20 NAI 47.1471
1000 1SC6 NAD 47.1471
Pocket No.: 2; Query (leader) PDB : 6BII; Ligand: NAP; Similar sites found with APoc: 19
This union binding pocket(no: 2) in the query (biounit: 6bii.bio1) has 30 residues
No: Leader PDB Ligand Sequence Similarity
1 1KC7 PPR 2.1021
2 4DYG MES 2.45902
3 3UDG TMP 2.99003
4 2GJP MAL 3.003
5 3C7A NAD 3.003
6 1LK7 DER 3.05677
7 3GDN FAD 3.6036
8 2RGO FAD 3.6036
9 3V0H I3P 4.2042
10 5KVS 6XR 4.5045
11 1UAY ADN 4.95868
12 2BKA NDP 8.10811
13 1O8B ABF 8.6758
14 1Z0N BCD 9.375
15 5YRL GLC GLC 13.3803
16 1T0S BML 15.1163
17 5Z21 OXM 36.3129
18 3KB6 LAC 46.7066
19 5Z20 OXM 47.1471
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