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Receptor
PDB id Resolution Class Description Source Keywords
6BQ6 1.65 Å EC: 7.-.-.- CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA THERMOSPERMINE SYNT (MTTSPS) IN COMPLEX WITH THERMOSPERMINE MEDICAGO TRUNCATULA POLYAMINE BIOSYNTHESIS TETRAAMINE THERMOSPERMINE SPERMIDIAMINOPROPYL TRANSFERASE TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF THERMOSPERMINE SYNTHASE FROMME TRUNCATULAAND SUBSTRATE DISCRIMINATORY FEATURES OF AMINOPROPYLTRANSFERASES. BIOCHEM. J. V. 475 787 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
TER B:402;
A:402;
Valid;
Valid;
none;
none;
submit data
202.34 C10 H26 N4 C(CCN...
CL B:401;
A:401;
Invalid;
Invalid;
none;
none;
submit data
35.453 Cl [Cl-]
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6BQ6 1.65 Å EC: 7.-.-.- CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA THERMOSPERMINE SYNT (MTTSPS) IN COMPLEX WITH THERMOSPERMINE MEDICAGO TRUNCATULA POLYAMINE BIOSYNTHESIS TETRAAMINE THERMOSPERMINE SPERMIDIAMINOPROPYL TRANSFERASE TRANSFERASE
Ref.: CRYSTAL STRUCTURE OF THERMOSPERMINE SYNTHASE FROMME TRUNCATULAAND SUBSTRATE DISCRIMINATORY FEATURES OF AMINOPROPYLTRANSFERASES. BIOCHEM. J. V. 475 787 2018
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 293 families.
1 6BQ6 - TER C10 H26 N4 C(CCNCCCNC....
2 6BQ7 - SPD C7 H19 N3 C(CCNCCCN)....
3 6BQ5 - MTA C11 H15 N5 O3 S CSC[C@@H]1....
4 6BQ4 - ADN C10 H13 N5 O4 c1nc(c2c(n....
5 6BQ3 - DSH C13 H20 N6 O3 S c1nc(c2c(n....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 250 families.
1 6BQ6 - TER C10 H26 N4 C(CCNCCCNC....
2 6BQ7 - SPD C7 H19 N3 C(CCNCCCN)....
3 6BQ5 - MTA C11 H15 N5 O3 S CSC[C@@H]1....
4 6BQ4 - ADN C10 H13 N5 O4 c1nc(c2c(n....
5 6BQ3 - DSH C13 H20 N6 O3 S c1nc(c2c(n....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 204 families.
1 6BQ6 - TER C10 H26 N4 C(CCNCCCNC....
2 6BQ7 - SPD C7 H19 N3 C(CCNCCCN)....
3 6BQ5 - MTA C11 H15 N5 O3 S CSC[C@@H]1....
4 6BQ4 - ADN C10 H13 N5 O4 c1nc(c2c(n....
5 6BQ3 - DSH C13 H20 N6 O3 S c1nc(c2c(n....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: TER; Similar ligands found: 9
No: Ligand ECFP6 Tc MDL keys Tc
1 TER 1 1
2 SPD 0.869565 1
3 37Z 0.73913 0.913043
4 SPM 0.708333 1
5 NSD 0.652174 0.913043
6 SP5 0.555556 0.71875
7 SS9 0.548387 0.958333
8 Q9C 0.5 0.71875
9 FKS 0.461538 0.638889
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6BQ6; Ligand: TER; Similar sites found with APoc: 925
This union binding pocket(no: 1) in the query (biounit: 6bq6.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 2RGO FAD 1.20846
2 5EIN NAP 1.20846
3 2RGH FAD 1.20846
4 1UAY ADN 1.23967
5 1OFZ FUC 1.28205
6 3HVJ 705 1.35747
7 5JGL SAM 1.38408
8 3EVF GTA 1.44404
9 3EVF SAH 1.44404
10 2JJQ SAH 1.51057
11 2IZ1 ATR 1.51057
12 4AP3 FAD 1.51057
13 4AP3 NAP 1.51057
14 1YY5 FAD 1.51057
15 1RSG FAD 1.51057
16 5GSN NAP 1.51057
17 5GSN FAD 1.51057
18 5G3U FDA 1.51057
19 5GSN MMZ 1.51057
20 5G3U ITW 1.51057
21 6C4N NAP 1.51057
22 4C3Y ANB 1.51057
23 4C3Y FAD 1.51057
24 5HXI 5HN 1.51057
25 5HXI FAD 1.51057
26 2IXB A2G 1.51057
27 1ZEM NAD 1.52672
28 3G2O SAM 1.67224
29 3M6W SAM 1.72414
30 1G0N NDP 1.76678
31 1G0N PHH 1.76678
32 1H82 FAD 1.81269
33 1H82 GZZ 1.81269
34 1FEC FAD 1.81269
35 3NTD FAD 1.81269
36 1RM0 NAI 1.81269
37 1RM0 D6P 1.81269
38 3NT6 FAD 1.81269
39 2Z3Y F2N 1.81269
40 2GZ3 NAP 1.81269
41 1PL6 NAD 1.81269
42 5Y77 FAD 1.81269
43 4G5H UD7 1.81269
44 4G5H NAP 1.81269
45 5MW4 5JU 1.81269
46 5DNK SAH 1.81269
47 1P31 EPU 1.81269
48 5LD5 NAD 1.81269
49 4D42 NAP 1.81269
50 4D42 W0I 1.81269
51 3IHG FAD 1.81269
52 5UR0 NAD 1.81269
53 1PL6 572 1.81269
54 4BG4 ARG 1.81269
55 2JK0 ASP 1.84615
56 3T7S SAM 1.86567
57 3CTY FAD 1.88088
58 5BJX UDP 1.91257
59 5BJX NAD 1.91257
60 3BGD SAH 1.92308
61 3BGD PM6 1.92308
62 4D3F NAP 1.93548
63 2I3G NAP 1.98864
64 4BLW SAH 2.07612
65 4BLW AMP 2.07612
66 1WP4 NDP 2.07612
67 1L1E SAH 2.09059
68 3BXO SAM 2.09205
69 1XDS SAM 2.1148
70 3X0D SAH 2.1148
71 4EUE NAI 2.1148
72 3AYI FAD 2.1148
73 3AYI HCI 2.1148
74 3AXB PRO 2.1148
75 3AXB FAD 2.1148
76 5TS5 FAD 2.1148
77 1QZZ SAM 2.1148
78 3K7M FAD 2.1148
79 3LXD FAD 2.1148
80 2ZJ1 NAD 2.1148
81 1D4D FAD 2.1148
82 5M67 3D1 2.1148
83 5M67 ADE 2.1148
84 4J36 1HR 2.1148
85 2ZJ1 ARJ 2.1148
86 3WGT FAD 2.1148
87 3WGT QSC 2.1148
88 5NA1 FAD 2.1148
89 4L9Z OXL 2.1148
90 5M67 NAD 2.1148
91 4J36 FAD 2.1148
92 5X68 FAD 2.1148
93 1V8B NAD 2.1148
94 2C5A GDC 2.1148
95 2C5A NAD 2.1148
96 5DF1 58X 2.1148
97 5DF1 NAP 2.1148
98 5EB4 FAD 2.1148
99 4AT0 FAD 2.1148
100 1D4D SIN 2.1148
101 4ZVV GN0 2.1148
102 1Z45 NAD 2.1148
103 4GLL NAD 2.1148
104 4XB2 NDP 2.1148
105 3GMB FAD 2.1148
106 4ZVV NAD 2.1148
107 2GSD NAD 2.1148
108 1BXK NAD 2.1148
109 1CF2 NAP 2.1148
110 4E5N NAD 2.12121
111 6EYT NDG 2.14067
112 3FPZ AHZ 2.14724
113 4TQG NDP 2.16718
114 6ECT SAM 2.18069
115 3QWI CUE 2.22222
116 4D52 GXL 2.22222
117 4D4U FUC GAL NAG 2.22222
118 3QWI NAP 2.22222
119 1GUZ NAD 2.25806
120 5ZRR 9J3 2.26415
121 4XUC SAM 2.29358
122 4XUC 43G 2.29358
123 3JWH SAH 2.30415
124 1Z3C SA8 2.34899
125 1S7G APR 2.37154
126 1S7G NAD 2.37154
127 5BSZ SAH 2.4
128 3O03 NAP 2.4055
129 3U31 NAD 2.41379
130 1GPE FAD 2.41692
131 5TWB FAD 2.41692
132 1MO9 FAD 2.41692
133 4D04 NAP 2.41692
134 4D04 FAD 2.41692
135 1MO9 KPC 2.41692
136 3A70 NPO 2.41692
137 2IID PHE 2.41692
138 2IID FAD 2.41692
139 2XVF FAD 2.41692
140 2XVE FAD 2.41692
141 4FWE FAD 2.41692
142 1REO FAD 2.41692
143 4XQC 13D 2.41692
144 4XQC NAD 2.41692
145 3ZNN FAD 2.41692
146 3ZNN 4WL 2.41692
147 3NDJ SAH 2.41692
148 3NDJ JHZ 2.41692
149 2DKH 3HB 2.41692
150 2R4J 13P 2.41692
151 2R4J FAD 2.41692
152 1BW9 NAD 2.41692
153 1OBB NAD 2.41692
154 2B9W FAD 2.41692
155 1PZG A3D 2.41692
156 4C6F NCD 2.41692
157 4C6F DOR 2.41692
158 1CER NAD 2.41692
159 2DKH FAD 2.41692
160 1G8K MGD 2.41692
161 3G5S FAD 2.41692
162 5K0A FAD 2.42424
163 5KXE 6Y2 2.46914
164 1I9G SAM 2.5
165 4YMH SAH 2.5
166 5LX6 78P 2.6178
167 5DM1 SAH 2.62172
168 5DM1 5D7 2.62172
169 3DUW SAH 2.69058
170 1FP2 SAH 2.71903
171 5ERG SAM 2.71903
172 5VN0 FAD 2.71903
173 5VN0 NAI 2.71903
174 2Q28 ADP 2.71903
175 2WPF FAD 2.71903
176 3CGD FAD 2.71903
177 4M52 FAD 2.71903
178 5KMS FAD 2.71903
179 5DX1 SFG 2.71903
180 5DXA SFG 2.71903
181 5DX8 SFG 2.71903
182 3CGD COA 2.71903
183 3CGD NAD 2.71903
184 2WPF WPF 2.71903
185 6ARJ BW4 2.71903
186 5ZQS XYP 2.71903
187 6ARJ SAH 2.71903
188 5DWQ SFG 2.71903
189 1R6D NAD 2.71903
190 1COY FAD 2.71903
191 6FDF SAH 2.71903
192 1R6D DAU 2.71903
193 5DX0 SFG 2.71903
194 4M52 M52 2.71903
195 3QOX SAH 2.71903
196 5KMS NAD 2.71903
197 3CGB FAD 2.71903
198 2EFJ SAH 2.71903
199 1VJT NAD 2.71903
200 2A8X FAD 2.71903
201 1ELI PYC 2.71903
202 2YG3 FAD 2.71903
203 1COY AND 2.71903
204 4MOP 2H5 2.71903
205 1EBF NAD 2.71903
206 3S5W FAD 2.71903
207 5J7X FAD 2.71903
208 1ORR NAD 2.71903
209 1DJN ADP 2.71903
210 5ICE 2H4 2.71903
211 5ICE SAH 2.71903
212 1M2Z BOG 2.72374
213 5FEU NAP 2.74914
214 4I9A NCN 2.77778
215 1F3L SAH 2.80374
216 1M2K APR 2.81124
217 2DPM SAM 2.8169
218 5H4S RAM 2.8169
219 1NW5 SAM 2.82132
220 1DL5 SAH 2.83912
221 1PR9 NAP 2.86885
222 3D3W NAP 2.86885
223 2OFW ADX 2.88462
224 2UYQ SAM 2.90323
225 2UVO NAG 2.92398
226 4TXI FAD 2.92683
227 4FZV SAM 2.92887
228 2HNK SAH 2.92887
229 5THQ NDP 2.94118
230 2P41 SAH 2.95082
231 5OJL TXP 3.02013
232 1UWK NAD 3.02115
233 1UWK URO 3.02115
234 3L9W AMP 3.02115
235 3L9W GSH 3.02115
236 3UCL NAP 3.02115
237 5J5Z FAD 3.02115
238 3UCL FAD 3.02115
239 3UCL CYH 3.02115
240 3TKA SAM 3.02115
241 3SQP FAD 3.02115
242 6ER9 FAD 3.02115
243 6ER9 NAP 3.02115
244 1NAA ABL 3.02115
245 1NAA 6FA 3.02115
246 1LVL NAD 3.02115
247 1BZL FAD 3.02115
248 5K7U SAM 3.02115
249 1BZL GCG 3.02115
250 3NKS FAD 3.02115
251 3ABI NAD 3.02115
252 4RVG TYD 3.02115
253 4RVG SAM 3.02115
254 3OZ2 FAD 3.02115
255 3NTA FAD 3.02115
256 1C0I BE2 3.02115
257 1C0I FAD 3.02115
258 1LVL FAD 3.02115
259 2HHP FLC 3.02115
260 6AIN FAD 3.02115
261 1YBH FAD 3.02115
262 3HDY FDA 3.02115
263 3HDY GDU 3.02115
264 6GKV SAH 3.02115
265 3HDY FAD 3.02115
266 4BJZ P3A 3.02115
267 4BJZ FAD 3.02115
268 1F8G NAD 3.02115
269 6EOM ALA LYS 3.02115
270 5EZ7 FAD 3.02115
271 3F8D FAD 3.09598
272 5UAV TFB 3.10559
273 5UAV NDP 3.10559
274 5FFF 5XC 3.11284
275 5FTW SAH 3.125
276 5WUW NAP 3.13589
277 3WCS MAN NAG 3.14961
278 1TDF FAD 3.16456
279 1TDF NAP 3.16456
280 3WV8 ATP 3.21101
281 5EJ2 NAD 3.24675
282 3GWZ SAH 3.25203
283 3GXO SAH 3.25203
284 2PXX SAH 3.25581
285 3EVG SAH 3.27273
286 4CSD MFU 3.30882
287 3A27 SAM 3.30882
288 4KIB SAH 3.32326
289 2EJU SAH 3.32326
290 4KRG SAH 3.32326
291 1V59 FAD 3.32326
292 2JHP SAH 3.32326
293 4YKG FAD 3.32326
294 4YKG NAD 3.32326
295 2C7G FAD 3.32326
296 2NVK FAD 3.32326
297 2C7G ODP 3.32326
298 1GTE FAD 3.32326
299 3SSO SAH 3.32326
300 2JB2 PHE 3.32326
301 2JB2 FAD 3.32326
302 4REP FAD 3.32326
303 1WD4 AHR 3.32326
304 5T67 SAH 3.32326
305 5T67 JHZ 3.32326
306 2NVK NAP 3.32326
307 1V59 NAD 3.32326
308 1GR0 NAD 3.32326
309 1T9D 1MM 3.32326
310 1T9D PYD 3.32326
311 1T9D P25 3.32326
312 2WR1 NAG 3.32326
313 5X7Q GLC GLC GLC GLC 3.32326
314 5WXU FLC 3.32326
315 3OID NDP 3.32326
316 3E7S AT2 3.32326
317 5WKC FAD 3.32326
318 4CQM NAP 3.32326
319 1J49 NAD 3.32326
320 1T9D FAD 3.32326
321 2RGJ FAD 3.32326
322 1EK6 UPG 3.32326
323 2Q1W NAD 3.32326
324 1EK6 NAI 3.32326
325 1D1T NAD 3.32326
326 1GPM CIT 3.32326
327 4LOO SB4 3.32326
328 5IL1 SAM 3.33333
329 5BW4 SAM 3.37079
330 1OMO NAD 3.41615
331 5N0J FAD 3.4188
332 2AG8 NAP 3.42205
333 1OYJ GSH 3.4632
334 1R18 SAH 3.52423
335 3VPH OXM 3.54839
336 6F7L FAD 3.61991
337 2BRY FAD 3.62173
338 6FP4 E1T 3.62538
339 5FUB SAH 3.62538
340 3GD4 NAD 3.62538
341 3LZW FAD 3.62538
342 6FP4 FAD 3.62538
343 3LZW NAP 3.62538
344 3KLJ FAD 3.62538
345 2EG5 SAH 3.62538
346 4EMI NAD 3.62538
347 4BV6 FAD 3.62538
348 3GD4 FAD 3.62538
349 5XNC MTA 3.62538
350 6FHO FAD 3.62538
351 2WET FAD 3.62538
352 4EMI FAD 3.62538
353 6D6Y SAH 3.62538
354 4M73 SAH 3.62538
355 6F97 FAD 3.62538
356 3GDN HBX 3.62538
357 3QJ4 FAD 3.62538
358 1WDK NAD 3.62538
359 3GDN FAD 3.62538
360 1NVM NAD 3.62538
361 4M73 M72 3.62538
362 4U8P UDP 3.62538
363 4U8P FDA 3.62538
364 3KB6 NAD 3.62538
365 6BWL NAD 3.65854
366 5N6C NAD 3.66667
367 2PX8 SAH 3.71747
368 3O7W SAM 3.7415
369 1O97 FAD 3.78788
370 1O97 AMP 3.78788
371 1O94 ADP 3.78788
372 2DT5 NAD 3.79147
373 2A14 SAH 3.80228
374 1KPH SAH 3.83275
375 1KPG SAH 3.83275
376 4IF4 BEF 3.84615
377 3QPB URA 3.90071
378 2BS3 CIT 3.90625
379 1EFV FAD 3.92157
380 1EFV AMP 3.92157
381 2YX1 SFG 3.92749
382 1Q9I FAD 3.92749
383 1Q9I TEO 3.92749
384 1E1M FAD 3.92749
385 1E1M NAP 3.92749
386 1OC2 NAD 3.92749
387 1OC2 TDX 3.92749
388 5W75 SUC 3.92749
389 4NZF ARB 3.92749
390 5HC0 NPO 3.92749
391 3V1Y NAD 3.92749
392 1E3I CXF 3.92749
393 4XNV BUR 3.92749
394 2OG7 AHB 3.92749
395 5JWC FAD 3.92749
396 4PNE SAH 3.97351
397 3P2E SAH 4
398 5TQZ GLC 4
399 2Z9I GLY ALA THR VAL 4.01235
400 1KYQ NAD 4.0146
401 2OOR NAD 4.02299
402 5JE0 SAH 4.04858
403 5JE0 AZ8 4.04858
404 1A5Z NAD 4.07523
405 1LTH NAD 4.07523
406 5N53 8NB 4.10256
407 4K5S PM0 4.10448
408 4K5S FAD 4.10448
409 3OFK SAH 4.16667
410 6FLZ MMA 4.16667
411 2Q0L FAD 4.18006
412 2Q0L NAP 4.18006
413 5UFN SAH 4.20168
414 4AF5 CIT 4.21053
415 3WDM ADN 4.21456
416 1RP0 AHZ 4.22535
417 1SQF SAM 4.22961
418 5YF1 SFG 4.22961
419 5WP4 SAH 4.22961
420 4Y30 49L 4.22961
421 4B63 FAD 4.22961
422 4B63 ORN 4.22961
423 4B63 NAP 4.22961
424 6C5B SAH 4.22961
425 5U8U FAD 4.22961
426 3T31 FAD 4.22961
427 3T31 DCQ 4.22961
428 3LST SAH 4.22961
429 4D5G FAD 4.22961
430 4D5G TPP 4.22961
431 2NPX NAD 4.22961
432 2NPX FAD 4.22961
433 1V5F TPP 4.22961
434 1V5F FAD 4.22961
435 5XWV NDP 4.22961
436 5YF1 8V0 4.22961
437 4USR FAD 4.22961
438 4Y30 SAH 4.22961
439 5XWV 8H6 4.22961
440 4USQ FAD 4.22961
441 4MO2 FDA 4.22961
442 4PLG NAI 4.22961
443 4PLG OXM 4.22961
444 3AB1 FAD 4.22961
445 4MO2 FAD 4.22961
446 5MGZ SAH 4.23729
447 3LCC SAH 4.25532
448 5M58 SAH 4.34783
449 1TZD ADP 4.36364
450 3FUU ADN 4.42804
451 5KZD RCJ 4.43686
452 2AG5 NAD 4.47154
453 5E9W SAH 4.48718
454 5E8J SAH 4.48718
455 4L8F MTX 4.48718
456 2XVM SAH 4.52261
457 3QH2 3NM 4.52489
458 3TKY SAH 4.53172
459 1FP1 SAH 4.53172
460 5NMX NAP 4.53172
461 5NMX FAD 4.53172
462 1SC6 NAD 4.53172
463 1YKJ FAD 4.53172
464 1YKJ PHB 4.53172
465 5BRT CH9 4.53172
466 5BRT FAD 4.53172
467 1RJD SAM 4.53172
468 5MLR NAP 4.53172
469 5MLR GRQ 4.53172
470 2CUN 3PG 4.53172
471 1GY8 NAD 4.53172
472 1WG8 SAM 4.5614
473 4L2I FAD 4.56274
474 5DYO FLU 4.58716
475 3FXU TSU 4.59016
476 3ZW0 FUC 4.5977
477 2WPB ZZI 4.60526
478 2ZQO NGA 4.61538
479 4R6W PC 4.65116
480 4R6W SAH 4.65116
481 3A25 SAM 4.65116
482 1XCL SAH 4.68085
483 1L3I SAH 4.6875
484 5OVK NDP 4.6875
485 4NTD FAD 4.70588
486 6ECU SAH 4.74684
487 6ECW SAH 4.7619
488 3LAD FAD 4.83384
489 4OPC PGT 4.83384
490 4OPC FDA 4.83384
491 3NJ4 AFX 4.83384
492 3NJ4 NAD 4.83384
493 4X9M FAD 4.83384
494 1SB8 UD2 4.83384
495 1SB8 NAD 4.83384
496 5U19 SAH 4.83384
497 5U19 827 4.83384
498 1KOL NAD 4.83384
499 2JHF NAD 4.83384
500 1U6R IOM 4.83384
501 1U3U NAD 4.83384
502 1U3U BNF 4.83384
503 3EYA FAD 4.83384
504 2GDZ NAD 4.86891
505 3QV1 NAD 4.87805
506 2FWP CIT 4.91803
507 2FWP ICR 4.91803
508 4NEC SAH 4.92424
509 5OFW 9TW 4.93274
510 5GT9 NAP 4.94297
511 6AA8 NAD 4.96689
512 1U7T TDT 4.98084
513 2A92 NAI 4.98442
514 5KVA SAM 5.03597
515 3OND NAD 5.12295
516 3OND ADN 5.12295
517 5W7K SAH 5.12821
518 3VC1 GST 5.12821
519 3VC1 SAH 5.12821
520 4A6D SAM 5.13595
521 1ZK7 FAD 5.13595
522 1GET NAP 5.13595
523 1GET FAD 5.13595
524 5OC1 FAD 5.13595
525 4J56 FAD 5.13595
526 4HA6 FAD 5.13595
527 1QO8 FAD 5.13595
528 1RYI GOA 5.13595
529 2Y6Q I7T 5.13595
530 2Y6Q FAD 5.13595
531 1RYI FAD 5.13595
532 2GV8 FAD 5.13595
533 2GVC FAD 5.13595
534 3FG2 FAD 5.13595
535 5FPN KYD 5.13595
536 4RPL 3UC 5.13595
537 4RPL FAD 5.13595
538 4CIB 7UZ 5.13595
539 1I7Q BEZ 5.13595
540 6IS0 SAH 5.13595
541 3LU1 NAD 5.13595
542 3QFA FAD 5.17241
543 6GNA FAD 5.20833
544 5YSI NCA 5.26316
545 3GU3 SAH 5.28169
546 3ELW SAM 5.33333
547 3ELW GP3 5.33333
548 1OFS SUC 5.34759
549 4GK9 MAN BMA MAN MAN MAN 5.37634
550 1E6W NAD 5.38462
551 6GAS FAD 5.43807
552 2IVD FAD 5.43807
553 3TLJ SAH 5.43807
554 1PN0 FAD 5.43807
555 6H3O FAD 5.43807
556 1PN0 IPH 5.43807
557 4CNK FAD 5.43807
558 1VQW FAD 5.43807
559 1GPJ CIT 5.43807
560 4KOA NDP 5.43807
561 1ZGS XMM 5.43807
562 2V6G NAP 5.43807
563 6GNC FAD 5.44218
564 5W7M SAH 5.44872
565 1P1C SAH 5.52764
566 2OBF F83 5.53633
567 2OBF SAH 5.53633
568 2HMT NAI 5.55556
569 1TPY SAH 5.57491
570 5OJ7 AR6 5.59441
571 5JE8 NAD 5.62914
572 5MZI FYK 5.63991
573 5MZI FAD 5.63991
574 1H5Q NAP 5.66038
575 1WK8 VMS 5.6701
576 2DTX BMA 5.68182
577 1UJ5 5RP 5.72687
578 4DMG SAM 5.74018
579 1ZGA SAH 5.74018
580 3I53 SAH 5.74018
581 5FWA J7C 5.74018
582 2GMH FAD 5.74018
583 1U2Z SAH 5.74018
584 5KOK SAH 5.74018
585 1UDB NAD 5.74018
586 1UDB UFG 5.74018
587 1VKO NAD 5.74018
588 6C8R SAH 5.74018
589 5KOK S9T 5.74018
590 6EL3 NAP 5.74018
591 5HJM MTA 5.74018
592 1X7D ORN 5.74018
593 2PZM NAD 5.75758
594 2PZM UDP 5.75758
595 2AE2 NAP 5.76923
596 2AE2 PTO 5.76923
597 6B92 SAH 5.78231
598 1GV0 NAD 5.80645
599 2AOT SAH 5.82192
600 1JQD SAH 5.82192
601 4PIO SAH 5.88235
602 4PIO AVI 5.88235
603 1NV8 MEQ 5.98592
604 1NV8 SAM 5.98592
605 5CUQ NSC 5.99251
606 4NBU NAI 6
607 4MIG G3F 6.01852
608 3ICT ADP 6.0423
609 3ICS ADP 6.0423
610 5JCM NAD 6.0423
611 5JCM ISD 6.0423
612 5JCM FAD 6.0423
613 3ICT FAD 6.0423
614 3ICS FAD 6.0423
615 3ICR FAD 6.0423
616 1KYZ SAH 6.0423
617 4EIP FAD 6.0423
618 6BII NAP 6.0423
619 2VDV SAM 6.09756
620 4X7Y SAH 6.20438
621 1P77 ATR 6.25
622 1WY7 SAH 6.28019
623 3OA2 NAD 6.28931
624 1N2X SAM 6.31229
625 1X87 NAD 6.34441
626 1JNR FAD 6.34441
627 6F3N NAD 6.34441
628 6F3N ADN 6.34441
629 6F3M NAD 6.34441
630 5O9F 9ON 6.34441
631 5O9F NAD 6.34441
632 1RJW ETF 6.34441
633 3GGO ENO 6.36943
634 3GGO NAI 6.36943
635 4HXY NDP 6.39269
636 4YSX MLI 6.41026
637 4ZRN UPG 6.41026
638 4ZRN NAD 6.41026
639 4YSX FAD 6.41026
640 1UXG NAD 6.47249
641 1UXG FUM 6.47249
642 3NUG NAD 6.47773
643 2RH4 EMO 6.4982
644 3H8V ATP 6.50685
645 2VT3 ATP 6.51163
646 5O4J 9KH 6.56934
647 5O4J SAH 6.56934
648 5O4J PJL 6.56934
649 6F9Q NAD 6.61765
650 2GAG NAD 6.64653
651 1Q1R FAD 6.64653
652 2GAG FOA 6.64653
653 2GAG FAD 6.64653
654 2C31 TZD 6.64653
655 2C31 ADP 6.64653
656 1KEW NAD 6.64653
657 4IV9 FAD 6.64653
658 4A59 AMP 6.64653
659 1XTP SAI 6.69291
660 5ULP KB1 6.71642
661 5ZZ6 NAD 6.73077
662 5ZZ6 ADP 6.73077
663 6GFK SAH 6.77291
664 1YS4 NAP 6.94864
665 5JAQ NAI 6.94864
666 4TM3 FAD 6.94864
667 3B6R CRN 6.94864
668 1DLJ UGA 6.94864
669 1DLJ NAI 6.94864
670 2O4C NAD 6.94864
671 1JA9 NDP 6.94864
672 3UN3 G16 6.94864
673 1EDO NAP 6.96721
674 5D4V SAH 7.08955
675 2G5C NAD 7.11744
676 3MAG SAH 7.16612
677 3C3Y SAH 7.173
678 1LOB MMA 7.18232
679 2HQM FAD 7.25076
680 2ZWA SAH 7.25076
681 5W7R SAH 7.25076
682 4GKV NAD 7.25076
683 5O42 9JW 7.29927
684 5O42 NAD 7.29927
685 5O42 BGC 7.29927
686 3DXY SAM 7.33945
687 3MQ2 SAH 7.33945
688 5Z2L NDP 7.34694
689 2XYQ SAH 7.37705
690 3MCT SAH 7.40741
691 1HYH NAD 7.44337
692 5L95 AMP 7.5
693 5E72 SAM 7.55287
694 2YVF NAD 7.55287
695 2YVF FAD 7.55287
696 2YVJ NAI 7.55287
697 4C4A SAH 7.55287
698 4N49 SAM 7.55287
699 2YVJ FAD 7.55287
700 4RSL FAD 7.55287
701 9LDB NAD 7.55287
702 5TUK FAD 7.55287
703 9LDT NAD 7.55287
704 5GWT SIN 7.55396
705 5GWT NAD 7.55396
706 2WA2 SAM 7.6087
707 5ODQ FAD 7.6087
708 3GEG NAD 7.69231
709 6CI9 NAP 7.72201
710 1FL2 FAD 7.74194
711 3QVP FAD 7.85498
712 4KGD FAD 7.85498
713 4KGD TDP 7.85498
714 2VVM FAD 7.85498
715 4Z24 FAD 7.85498
716 3FRH SAH 7.85498
717 5DLY SAH 7.89474
718 5DLY 5D7 7.89474
719 2BGM NAJ 7.91367
720 3A4T SFG 8.0292
721 1E3W NAD 8.04598
722 6AM8 TRP 8.08081
723 4OM8 NAD 8.09062
724 6DUB SAH 8.10811
725 4J4H 1J1 8.10811
726 4J4H NAI 8.10811
727 5WP5 SAH 8.1571
728 2CDU ADP 8.1571
729 2CDU FAD 8.1571
730 4YNU LGC 8.1571
731 5MPT SAH 8.1571
732 5KOX FAD 8.1571
733 5KOX RFP 8.1571
734 1VBO MAN MAN MAN 8.1571
735 4YNU FAD 8.1571
736 2VVL FAD 8.1571
737 4PLT OXM 8.1571
738 3X0V FAD 8.1571
739 1VBO MAN 8.1571
740 4PLT NAI 8.1571
741 5Z21 NAI 8.1571
742 4RDH AMP 8.33333
743 4RDI ATP 8.33333
744 5N5D SAM 8.40708
745 4EMJ FAD 8.41121
746 5K4W THR 8.41121
747 5K4W NAI 8.41121
748 2H88 TEO 8.45921
749 4ZGS NAD 8.45921
750 5EOW FAD 8.45921
751 2PWY SAH 8.52713
752 3OJO NAD 8.58469
753 5KKA 6V0 8.65385
754 2WSB NAD 8.66142
755 4D79 ATP 8.69565
756 4DCM SAM 8.76133
757 1G55 SAH 8.76133
758 1Y8Q ATP 8.76133
759 5GM1 SAH 8.76133
760 2QA1 FAD 8.76133
761 5MBX FAD 8.76133
762 5MBX SP5 8.76133
763 1V6A TRE 8.76133
764 2E5V FAD 8.76133
765 5ZYN FAD 8.76133
766 1U1I NAD 8.76133
767 4D7E FAD 8.76133
768 3WLE NAD 8.79765
769 1G60 SAM 8.84615
770 3O9Z NAD 8.97436
771 3O9Z AKG 8.97436
772 5EEH P9P 9.04255
773 5EEH SAH 9.04255
774 2CUL FAD 9.05172
775 4ZCC FAD 9.06344
776 4ZCC NAI 9.06344
777 1XHL NDP 9.09091
778 1GZ6 NAI 9.09091
779 2FK8 SAM 9.1195
780 1ZBQ NAD 9.17431
781 5YEC ATP 9.2437
782 3ZV6 NAD 9.25267
783 3ZV6 4HB 9.25267
784 5FA8 SAM 9.31677
785 3ITJ CIT 9.36556
786 2RAB NAD 9.36556
787 5HSA FAS 9.36556
788 2RAB FAD 9.36556
789 4JNA FAD 9.36556
790 1XHC FAD 9.36556
791 3ITJ FAD 9.36556
792 5ZI2 ADP 9.36556
793 5ZI2 NAD 9.36556
794 4YAC NAI 9.42761
795 3GDH SAH 9.54357
796 1DCP HBI 9.61539
797 4KRI SAH 9.66767
798 1PJS NAD 9.66767
799 5THZ SAH 9.66767
800 4QS9 BGC 9.66767
801 5THY SAH 9.66767
802 4HSU FAD 9.67742
803 4GUT FAD 9.67742
804 4GUS FAD 9.67742
805 3VYW SAM 9.74026
806 1BDB NAD 9.74729
807 1QAN SAH 9.83607
808 4E13 NAD 9.89399
809 3VSE SAH 9.96979
810 4X60 3XV 9.96979
811 4X60 SFG 9.96979
812 4JDR FAD 9.96979
813 5TTJ FAD 9.96979
814 2GN4 UD1 9.96979
815 2GN4 NDP 9.96979
816 1PS9 FAD 9.96979
817 4ITU 1HS 10.0372
818 4ITU NAI 10.0372
819 5V6F MAN BMA MAN 10.1449
820 1UP7 NAD 10.2719
821 5F8F SFG 10.3448
822 3H2B SAH 10.3448
823 3Q87 SAM 10.4
824 4ONQ SFG 10.574
825 4YRY NAD 10.574
826 4YRY FAD 10.574
827 3GCZ SAM 10.6383
828 3EGI ADP 10.6796
829 3RKR NAP 10.687
830 1LSS NAD 10.7143
831 2BZG SAH 10.7759
832 1T26 NAI 10.8696
833 1T26 GBD 10.8696
834 4AZW SAM 10.8761
835 1FQK ALF 10.8844
836 4QTU SAM 11.0577
837 3AD8 FAD 11.1111
838 3AD8 PYC 11.1111
839 3AD8 NAD 11.1111
840 4LWP SAH 11.1782
841 5X62 SAH 11.1782
842 1IY8 NAD 11.236
843 2EWM NAD 11.245
844 5ZW3 SAH 11.5556
845 2Q1S NAI 11.7825
846 1I1N SAH 11.9469
847 1VDC FAD 12.0846
848 6F7X MFU 12.2222
849 1FUR MLT 12.3867
850 3NYC IAR 12.3867
851 3NYC FAD 12.3867
852 4NBW NAD 12.4514
853 1E6E FAD 12.5
854 3LKZ SFG 12.6888
855 1SAY PYR 12.6888
856 1KNR FAD 12.6888
857 5J60 FAD 12.8125
858 5E1M SAH 12.8631
859 5E1M PRO PRO LYS ARG ILE ALA 12.8631
860 2Q7V FAD 12.9231
861 4YT4 FE9 12.9909
862 2NXE SAM 12.9921
863 3FPF TNA 13.0872
864 3FPF MTA 13.0872
865 3UOY FAD 13.2931
866 3UOY NAP 13.2931
867 4M37 SAH 13.2931
868 4Y9D NAI 13.4426
869 6GAR FAD 13.5952
870 2VHW NAI 13.5952
871 3DMH SAM 13.8973
872 3DMH GMP 13.8973
873 1IM8 SAI 13.9344
874 4OBW SAM 14.0078
875 1JG3 ADN 14.0426
876 4FN4 NAD 14.1732
877 4NTC FAD 14.8036
878 1MUU NAD 14.8036
879 1ZQ9 SAM 15.0877
880 1MV8 NAD 15.4079
881 1VE3 SAM 15.4185
882 5TUF TDC 15.8924
883 5TUF FAD 15.8924
884 4UP3 FAD 15.9236
885 3MB5 SAM 16.8627
886 5JCA FAD 16.9184
887 5JCA NDP 16.9184
888 5LOG SAH 17.1674
889 4IWN GEK 17.4672
890 1YQZ FAD 17.8248
891 6DEN G8A 17.8248
892 6DEN TP9 17.8248
893 6DEN FAD 17.8248
894 2HJR APR 17.9878
895 1EJ0 SAM 18.3333
896 5MIT NAP 18.6544
897 5MIT FAD 18.6544
898 1UQX MMA 19.469
899 6F5Z SAH 19.6721
900 3G89 SAM 19.6787
901 5FA5 MTA 20
902 1Q0S SAH 20.4633
903 3RNM FAD 20.6897
904 1FWV SGA MAG FUC 20.8955
905 1X14 NAD 21.4502
906 3GRU AMP 21.7523
907 2ZFU SAH 21.8605
908 3CBG SAH 21.9828
909 3PT9 SAH 22.6586
910 4YAG NAI 22.8374
911 4II2 ATP 24.0964
912 2F5Z FAD 25
913 2HK9 ATR 28.3636
914 3C6K SPD 33.5347
915 3C6K MTA 33.5347
916 2PT9 S4M 35.8255
917 2PT9 2MH 35.8255
918 4GQB 0XU 36.3636
919 4M38 SAH 38.0952
920 2I7C AAT 40.636
921 2O07 SPD 47.6974
922 2O07 MTA 47.6974
923 1JQ3 AAT 48.3108
924 4YUW S4M 49.0132
925 4YUW 4JU 49.0132
Pocket No.: 2; Query (leader) PDB : 6BQ6; Ligand: TER; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 6bq6.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 6BQ6; Ligand: TER; Similar sites found with APoc: 189
This union binding pocket(no: 3) in the query (biounit: 6bq6.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
1 5KK4 44E None
2 4CQK PIO None
3 5B4T NAD 1.15385
4 5B4T 3HR 1.15385
5 2F1K NAP 1.43369
6 5AHO TLA 1.51057
7 2D2I NAP 1.51057
8 3B20 NAD 1.51057
9 2IXB NAD 1.51057
10 2FMD MAN MAN 1.66667
11 3B1F NAD 1.72414
12 1I2B USQ 1.73267
13 1I2B NAD 1.73267
14 1I2B UPG 1.73267
15 5Z20 NAI 1.81269
16 3CMC NAD 1.81269
17 4XFR CIT 1.81269
18 2X65 M1P 1.81269
19 2CDC XYP 1.81269
20 2CDC XYS 1.81269
21 2CDC NAP 1.81269
22 6CEP NAD 2.1148
23 3LGS SAH 2.24719
24 1CX4 CMP 2.29508
25 2B4R NAD 2.41692
26 5DN9 NAD 2.41692
27 1BXG NAD 2.41692
28 1GZ4 ATP 2.41692
29 2B4R AES 2.41692
30 3GFB NAD 2.41692
31 2VL1 GLY GLY 2.41692
32 6A3J SOE 2.41692
33 1C1X NAD 2.41692
34 6A3J NAI 2.41692
35 5Z75 NAD 2.44648
36 4QAR ADE 2.48756
37 4U36 TNR 2.5
38 3SJU NDP 2.50896
39 5NII FAD 2.589
40 2PV7 NAD 2.68456
41 5YB7 ORN 2.71903
42 5YB7 FAD 2.71903
43 1HDG NAD 2.71903
44 5LY2 OGA 2.71903
45 2AL2 PEP 2.71903
46 2AL2 2PG 2.71903
47 4OOE NDP 2.71903
48 4OOE FOM 2.71903
49 1GEG NAD 2.73438
50 4OHU NAD 2.76817
51 4OHU 2TK 2.76817
52 1LDN NAD 2.8481
53 1NW4 IMH 2.89855
54 4NBT NAD 2.91667
55 4B4U NAP 2.9703
56 2NAD NAD 3.02115
57 2YYY NAP 3.02115
58 3DAG FEG 3.02115
59 5YAP 8S0 3.02115
60 4PTN GXV 3.02115
61 5YAP NAI 3.02115
62 1HKU NAD 3.02115
63 2P4S DIH 3.02115
64 4JJF FE9 3.02115
65 1SOW NAD 3.04878
66 5FFF NAP 3.11284
67 3VZS NAP 3.11284
68 2AK5 ARG PRO PRO LYS PRO ARG PRO ARG 3.125
69 5TC4 NAD 3.16456
70 3HAD NAD 3.24675
71 2BD0 NAP 3.27869
72 4Z0H NAD 3.32326
73 1UC2 SUC 3.32326
74 2Q8G AZX 3.32326
75 4AVB CMP 3.32326
76 4R81 FMN 3.39806
77 4XBA GMP 3.5
78 4XBA 5GP 3.5
79 5XLX SAH 3.5461
80 3VPH NAD 3.54839
81 2CFC NAD 3.6
82 5L2R MLA 3.62538
83 3H5N ATP 3.62538
84 2DFV NAD 3.62538
85 4URF NAD 3.62903
86 1JXN MFU 3.71901
87 1EZ4 NAD 3.77358
88 3A4V NAD 3.78549
89 3A4V PYR 3.78549
90 3CH6 311 3.84615
91 3CH6 NAP 3.84615
92 1PNO NAP 3.88889
93 3CIF NAD 3.92749
94 3CIF G3H 3.92749
95 3V1U NAD 3.92749
96 2VYN NAD 3.92749
97 1VL8 NAP 4.11985
98 3WMX NAD 4.18994
99 5EXK 5AD 4.22961
100 5Y8L NAD 4.22961
101 5Y8L HUI 4.22961
102 5KJW 53C 4.22961
103 2BQP GLC 4.2735
104 3RF4 FUN 4.31034
105 6EQS BV8 4.36364
106 3IT7 TLA 4.3956
107 2GLX NDP 4.53172
108 5OJI ISN 4.61538
109 5OJI NAP 4.61538
110 1NFQ NAI 4.61538
111 6ACS CIT 4.65116
112 4DSG UDP 4.83384
113 4DSG FAD 4.83384
114 5YU3 NAD 4.83384
115 5YU3 PRO 4.83384
116 3L4S 3PG 4.83384
117 4MOB ADP 4.83384
118 1I8T FAD 4.83384
119 1RM4 NDP 4.83384
120 5ZBC FAD 4.83384
121 3L4S NAD 4.83384
122 1GAD NAD 4.84848
123 5YRG BGC GLC 4.92958
124 5F1V 3VN 5.05051
125 2B4Q NAP 5.07246
126 4COV GLA GAL 5.24345
127 1HDR NAD 5.32787
128 4MP8 NAD 5.43807
129 4MP8 MLI 5.43807
130 1KEV NDP 5.43807
131 3ORF NAD 5.57769
132 1YXM ADE 5.61056
133 1X7D NAD 5.74018
134 1DSS NAD 5.74018
135 5TOW ADN 5.74018
136 5TOW NAI 5.74018
137 5KVS NAP 5.74018
138 1JQD HSM 5.82192
139 1FNZ A2G 5.90717
140 2GCG NDP 6.06061
141 4ZDM GLY 6.13027
142 2I6U NVA 6.18893
143 3GF4 UPG 6.34441
144 3GF4 FAD 6.34441
145 3H9E NAD 6.34441
146 4EA7 COA 6.36364
147 4EA7 JB2 6.36364
148 3URB DPF 6.42202
149 2HFN FMN 6.53595
150 1H2B NAJ 6.64653
151 4YEE 4CQ 6.66667
152 1AE1 NAP 6.95971
153 4UCC ZKW 7.29614
154 1ODJ GMP 7.65957
155 4JK3 NAD 7.72201
156 5WBF LAC 7.77778
157 4WQQ MAN 7.80142
158 1ZOS MTM 7.82609
159 1O0S NAI 7.85498
160 1O5Q PYR 7.86885
161 1O6Z NAD 7.92079
162 5F7J ADE 8.125
163 2GUD MAN 8.19672
164 2GUC MAN 8.19672
165 1J0X NAD 8.76133
166 1SBR VIB 9
167 1Q7L GLY 9.09091
168 4YKI GLY 9.375
169 5AYV NAP 9.38511
170 1W8D NAP 9.93377
171 1W73 NAP 9.93377
172 3KO8 NAD 10.2564
173 1W6U NAP 10.2649
174 4RF2 NAP 10.2941
175 4FC7 NAP 10.4693
176 4FC7 COA 10.4693
177 2Z49 AMG 10.574
178 2Z48 NGA 10.574
179 2Z48 A2G 10.574
180 3EF0 ALF 10.8761
181 5LX9 OLB 11.2676
182 2YY7 NAD 12.1795
183 1FK8 NAD 14.0078
184 1R37 NAD 14.4092
185 5X20 NAD 14.4231
186 4UP3 NDP 15.9236
187 3IWD M2T 19.3548
188 3WQQ IB3 19.9396
189 3WQQ NDP 19.9396
Pocket No.: 4; Query (leader) PDB : 6BQ6; Ligand: TER; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 6bq6.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity