-->
Receptor
PDB id Resolution Class Description Source Keywords
6C4M 1.94 Å EC: 1.-.-.- YERSINOPINE DEHYDROGENASE (YPODH) - NADP+ BOUND YERSINIA PESTIS OPINE DEHYDROGENASE METALLOPHORE SIDEROPHORE YERSINOPINE PSEUDOPALINE STAPHYLOPINE OXIDOREDUCTASE
Ref.: STAPHYLOPINE, PSEUDOPALINE, AND YERSINOPINE DEHYDRO A STRUCTURAL AND KINETIC ANALYSIS OF A NEW FUNCTION OF OPINE DEHYDROGENASE. J. BIOL. CHEM. V. 293 8009 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAP C:501;
Valid;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6C4M 1.94 Å EC: 1.-.-.- YERSINOPINE DEHYDROGENASE (YPODH) - NADP+ BOUND YERSINIA PESTIS OPINE DEHYDROGENASE METALLOPHORE SIDEROPHORE YERSINOPINE PSEUDOPALINE STAPHYLOPINE OXIDOREDUCTASE
Ref.: STAPHYLOPINE, PSEUDOPALINE, AND YERSINOPINE DEHYDRO A STRUCTURAL AND KINETIC ANALYSIS OF A NEW FUNCTION OF OPINE DEHYDROGENASE. J. BIOL. CHEM. V. 293 8009 2018
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 318 families.
1 6C4M - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 280 families.
1 6C4M - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 187 families.
1 6C4M - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 6C4N - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 123
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NHD 0.68254 0.958904
10 NJP 0.661417 0.972973
11 NFD 0.658915 0.934211
12 NXX 0.619048 0.959459
13 DND 0.619048 0.959459
14 AMP NAD 0.606061 0.958904
15 ZID 0.605839 0.972603
16 NAQ 0.59854 0.922078
17 ATR 0.59292 0.917808
18 NAE 0.591241 0.946667
19 NDE 0.58042 0.986301
20 A22 0.571429 0.958904
21 NAJ 0.567164 0.986111
22 A2R 0.563025 0.932432
23 NDC 0.561644 0.922078
24 NA7 0.552846 0.907895
25 ODP 0.551471 0.935065
26 A2P 0.539823 0.930556
27 8ID 0.537313 0.910256
28 NPW 0.525547 0.8875
29 NZQ 0.521739 0.910256
30 CNA 0.521739 0.959459
31 NDP 0.514493 0.922078
32 PO4 PO4 A A A A PO4 0.503937 0.930556
33 1DG 0.503401 0.922078
34 DG1 0.503401 0.922078
35 TXP 0.5 0.922078
36 NMN AMP PO4 0.492958 0.921053
37 XNP 0.492958 0.875
38 25L 0.492308 0.958904
39 25A 0.492063 0.972222
40 NMN 0.486726 0.888889
41 NGD 0.485714 0.935065
42 9JJ 0.481707 0.8875
43 2AM 0.477876 0.891892
44 ADP 0.458333 0.945205
45 PAP 0.451613 0.931507
46 A2D 0.445378 0.945205
47 AN2 0.442623 0.932432
48 7L1 0.441558 0.777778
49 ADP PO3 0.44 0.944444
50 SAP 0.44 0.896104
51 AGS 0.44 0.896104
52 M33 0.439024 0.906667
53 AR6 AR6 0.438849 0.945205
54 BA3 0.438017 0.945205
55 OAD 0.43609 0.92
56 ADP BMA 0.43609 0.92
57 DQV 0.435714 0.958904
58 HEJ 0.435484 0.945205
59 ATP 0.435484 0.945205
60 OOB 0.435115 0.958904
61 B4P 0.434426 0.945205
62 AP5 0.434426 0.945205
63 GAP 0.433071 0.92
64 0WD 0.432432 0.922078
65 2A5 0.432 0.87013
66 5FA 0.432 0.945205
67 AQP 0.432 0.945205
68 AT4 0.430894 0.907895
69 00A 0.428571 0.909091
70 DAL AMP 0.427481 0.932432
71 CA0 0.427419 0.92
72 ADP ALF 0.426357 0.871795
73 ALF ADP 0.426357 0.871795
74 9X8 0.425373 0.871795
75 ACP 0.424 0.92
76 NAJ PZO 0.423841 0.897436
77 9SN 0.423358 0.897436
78 ADP VO4 0.423077 0.932432
79 VO4 ADP 0.423077 0.932432
80 WAQ 0.422222 0.884615
81 V3L 0.421875 0.945205
82 ACQ 0.421875 0.92
83 ADQ 0.421053 0.92
84 AR6 0.420635 0.918919
85 APR 0.420635 0.918919
86 ATP A A A 0.42029 0.958333
87 CO7 0.419753 0.786517
88 3OD 0.419118 0.92
89 1ZZ 0.419118 0.841463
90 DLL 0.41791 0.958904
91 AD9 0.417323 0.92
92 NAX 0.416667 0.875
93 OVE 0.416667 0.857143
94 MYR AMP 0.416058 0.841463
95 AV2 0.415385 0.868421
96 A3P 0.414634 0.944444
97 NNR 0.414414 0.72973
98 OMR 0.413793 0.831325
99 6YZ 0.412214 0.92
100 ANP 0.410853 0.92
101 A1R 0.410448 0.860759
102 ABM 0.409836 0.893333
103 A 0.408333 0.944444
104 AMP 0.408333 0.944444
105 SON 0.408 0.933333
106 PPS 0.407692 0.829268
107 5AL 0.407692 0.932432
108 NAI 0.406897 0.909091
109 7D3 0.406504 0.857143
110 ADX 0.404762 0.829268
111 ATF 0.40458 0.907895
112 3UK 0.404412 0.945946
113 TYR AMP 0.404255 0.921053
114 AMP DBH 0.404255 0.894737
115 139 0.402685 0.875
116 50T 0.401575 0.906667
117 SRP 0.401515 0.907895
118 A A 0.40146 0.972222
119 B5V 0.40146 0.933333
120 A3R 0.4 0.860759
121 3AM 0.4 0.90411
122 B5M 0.4 0.921053
123 FA5 0.4 0.933333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6C4M; Ligand: NAP; Similar sites found with APoc: 745
This union binding pocket(no: 1) in the query (biounit: 6c4m.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
1 1AE1 NAP 0.732601
2 1GY8 NAD 1.00756
3 3H4V NAP 1.04167
4 3H4V DVP 1.04167
5 2CVQ NDP 1.22324
6 1YY5 FAD 1.26582
7 5JY6 NAD 1.40449
8 5I39 FAD 1.47059
9 1FEC FAD 1.47679
10 5J5Z FAD 1.47679
11 2AQJ FAD 1.47679
12 2AQJ TRP 1.47679
13 5EB4 FAD 1.47679
14 3GDN FAD 1.47679
15 3GDN HBX 1.47679
16 3NTA FAD 1.47679
17 3NTD FAD 1.47679
18 3NT6 FAD 1.47679
19 2E5V FAD 1.48305
20 1DSS NAD 1.5015
21 2XVF FAD 1.50862
22 5GZ6 7C3 1.53374
23 5GZ6 NDP 1.53374
24 2IXB NAD 1.57658
25 2IXB A2G 1.57658
26 3A06 NDP 1.59574
27 3A06 FOM 1.59574
28 3O9Z AKG 1.60256
29 3O9Z NAD 1.60256
30 1P0F NAP 1.60858
31 1GR0 NAD 1.63488
32 1PL6 572 1.68539
33 1PL6 NAD 1.68539
34 4J36 FAD 1.68675
35 4J36 1HR 1.68675
36 1RYD NDP 1.68776
37 1MO9 FAD 1.68776
38 1MO9 KPC 1.68776
39 4JDR FAD 1.68776
40 2ZJ1 ARJ 1.68776
41 2ZJ1 NAD 1.68776
42 1GQ2 NAP 1.68776
43 1QO8 FAD 1.68776
44 3FWN ATR 1.68776
45 1V8B NAD 1.68776
46 5Z5I XYP 1.68776
47 5Y77 FAD 1.69133
48 6F3N NAD 1.69492
49 6F3N ADN 1.69492
50 1YS4 NAP 1.69492
51 4TSK NDP 1.71429
52 2XVE FAD 1.72414
53 3H9E NAD 1.7341
54 1Y8Q ATP 1.7341
55 6F3M NAD 1.73913
56 1E1M NAP 1.73913
57 1E1M FAD 1.73913
58 2GSD NAD 1.74129
59 5FJN FAD 1.75439
60 5FJN BE2 1.75439
61 1Y1P NMN AMP PO4 1.75439
62 5W3K 9TY 1.76471
63 5W3K NDP 1.76471
64 3LZW NAP 1.80723
65 3LZW FAD 1.80723
66 6GAS FAD 1.81269
67 1CER NAD 1.81269
68 1H6C SIN 1.84758
69 1H6C NDP 1.84758
70 1F8F NAD 1.88679
71 3NKS FAD 1.89873
72 5WGR FAD 1.89873
73 3LAD FAD 1.89873
74 4XQC 13D 1.89873
75 4XQC NAD 1.89873
76 1GZ4 ATP 1.89873
77 5E4R NAP 1.89873
78 4C3Y FAD 1.89873
79 2FR1 NDP 1.89873
80 1ZEM NAD 1.9084
81 2GZ3 NAP 1.91257
82 5BJX NAD 1.91257
83 5BJX UDP 1.91257
84 1U7T TDT 1.91571
85 3VPH NAD 1.93548
86 3VPH OXM 1.93548
87 4J1Q NDP 1.93966
88 1H2B NAJ 1.94986
89 4DPL NAP 1.94986
90 4EMI NAD 1.95122
91 4EMI FAD 1.95122
92 5NA1 FAD 1.96078
93 5TOW ADN 1.9656
94 5TOW NAI 1.9656
95 1BXG NAD 1.96629
96 1BW9 NAD 1.96629
97 1B74 DGN 1.9685
98 1C1X NAD 1.97183
99 2PV7 NAD 2.01342
100 3WGT FAD 2.01729
101 3WGT QSC 2.01729
102 3ZNN FAD 2.01729
103 3ZNN 4WL 2.01729
104 5Z20 NAI 2.02899
105 2YYY NAP 2.04082
106 1YQZ FAD 2.05479
107 1CF2 NAP 2.07715
108 4GKV NAD 2.08333
109 4KOA NDP 2.1021
110 1BZL FAD 2.1097
111 1BZL GCG 2.1097
112 1REO FAD 2.1097
113 1F8G NAD 2.1097
114 5TS5 FAD 2.1097
115 4D04 NAP 2.1097
116 4D04 FAD 2.1097
117 4D42 NAP 2.1097
118 4D42 W0I 2.1097
119 5UAO FAD 2.1097
120 2R4J FAD 2.1097
121 2R4J 13P 2.1097
122 4REP FAD 2.1097
123 1P31 EPU 2.1097
124 5Y1G NAD 2.13415
125 5Y1G AKB 2.13415
126 6AIN FAD 2.15311
127 5MZI FYK 2.1692
128 5MZI FAD 2.1692
129 3L9W AMP 2.17918
130 3L9W GSH 2.17918
131 5O42 9JW 2.18978
132 5O42 NAD 2.18978
133 5O42 BGC 2.18978
134 5O4J 9KH 2.18978
135 5O4J PJL 2.18978
136 5O4J SAH 2.18978
137 1KEW TYD 2.21607
138 1KEW NAD 2.21607
139 5Z21 NAI 2.23464
140 5AYV NAP 2.26537
141 5AYV KPL 2.26537
142 4PIV NDP 2.27273
143 1YKJ PHB 2.28426
144 1YKJ FAD 2.28426
145 2GMH FAD 2.32068
146 1V59 NAD 2.32068
147 3E1T FAD 2.32068
148 1V59 FAD 2.32068
149 4MOP 2H5 2.32068
150 1Z45 NAD 2.32068
151 4EDF UPG 2.32068
152 6DNT NAD 2.32558
153 5YU3 PRO 2.32558
154 5YU3 NAD 2.32558
155 5OVK NDP 2.34375
156 3WLE NAD 2.34604
157 4XDY NAI 2.36686
158 1R6D NAD 2.37389
159 1R6D DAU 2.37389
160 3S5W FAD 2.37581
161 3S5W NAP 2.37581
162 4YCA NDP 2.38095
163 1Z82 NDP 2.38806
164 2VYN NAD 2.39521
165 4ZVV GN0 2.40964
166 4ZVV NAD 2.40964
167 9LDB NAD 2.40964
168 9LDT NAD 2.40964
169 2C7G FAD 2.41228
170 2C7G ODP 2.41228
171 5AOA PPI 2.44755
172 3FPZ AHZ 2.45399
173 2NPX NAD 2.46085
174 2RGJ FAD 2.48756
175 3CIF G3H 2.50696
176 3CIF NAD 2.50696
177 5LD5 NAD 2.51397
178 3V1Y NAD 2.53165
179 1O0S NAI 2.53165
180 1H9A NAP 2.53165
181 4U8P UDP 2.53165
182 4U8P FDA 2.53165
183 2AJH MET 2.55102
184 5T9F TYR 2.58303
185 5T9F NAP 2.58303
186 1EK6 UPG 2.58621
187 1EK6 NAI 2.58621
188 3ETG GTP 2.59481
189 1LVL FAD 2.62009
190 1LVL NAD 2.62009
191 4XDZ NDP 2.62391
192 4L9Z OXL 2.65487
193 1U3U BNF 2.6738
194 1U3U NAD 2.6738
195 4Q9N NAI 2.68456
196 5BVA FAD 2.68949
197 2ZAT NAP 2.69231
198 3CMC NAD 2.69461
199 6CEP OXM 2.69461
200 6CEP NAD 2.69461
201 3G5S FAD 2.7088
202 1PZG A3D 2.71903
203 1GPE FAD 2.74262
204 3QVP FAD 2.74262
205 1D4D FAD 2.74262
206 2RGO FAD 2.74262
207 6BWL NAD 2.74262
208 1ZH8 NAP 2.74262
209 1COY FAD 2.74262
210 3NJ4 NAD 2.75862
211 3NJ4 AFX 2.75862
212 3B2Q AES 2.77186
213 6AM8 TRP 2.77778
214 1T26 GBD 2.79503
215 1T26 NAI 2.79503
216 1Q9I FAD 2.8021
217 1Q9I TEO 2.8021
218 4EMJ FAD 2.80374
219 5A96 GTP 2.81124
220 1VQW FAD 2.84464
221 1X7D ORN 2.85714
222 1X7D NAD 2.85714
223 3NYC FAD 2.88714
224 3NYC IAR 2.88714
225 1E5Q NDP 2.88889
226 2GVC FAD 2.90828
227 2GV8 FAD 2.90828
228 5OOH 9ZZ 2.91262
229 5OOH NAP 2.91262
230 2VHW NAI 2.91777
231 2INV FRU FRU 2.92683
232 1PS9 FAD 2.95359
233 3ULK NDP 2.95359
234 3X0V FAD 2.95359
235 1DJN ADP 2.95359
236 4HA6 FAD 2.95359
237 1PS9 NAP 2.95359
238 1RM0 D6P 2.95359
239 1RM0 NAI 2.95359
240 3WQQ NDP 2.95359
241 3WQQ IB3 2.95359
242 5KMS NAD 2.96296
243 5KMS FAD 2.96296
244 3QWI NAP 2.96296
245 3QWI CUE 2.96296
246 1W55 GPP 2.96496
247 2DC1 NAD 2.9661
248 1RM4 NDP 2.96736
249 1I2B USQ 2.9703
250 1I2B NAD 2.9703
251 1I2B UPG 2.9703
252 4RPL 3UC 3.00752
253 4RPL FAD 3.00752
254 2PZM UDP 3.0303
255 2PZM NAD 3.0303
256 1C0I FAD 3.0303
257 1C0I BE2 3.0303
258 1SAY PYR 3.04709
259 5Y8L NAD 3.05085
260 5Y8L HUI 3.05085
261 5X68 FAD 3.06905
262 3VZS NAP 3.11284
263 3VZS CAA 3.11284
264 3KLJ FAD 3.11688
265 1F06 NDP 3.125
266 1F06 2NP 3.125
267 1LUA NAP 3.13589
268 2JB2 PHE 3.16456
269 2JB2 FAD 3.16456
270 1TDF NAP 3.16456
271 2DKH 3HB 3.16456
272 2DKH FAD 3.16456
273 1TDF FAD 3.16456
274 5XWV NDP 3.16456
275 5XWV 8H6 3.16456
276 5GUD 2IT 3.16456
277 5GUD NDP 3.16456
278 5KVS 6XR 3.16456
279 5KVS NAP 3.16456
280 3SJ7 NDP 3.1746
281 5TUF TDC 3.17848
282 5TUF FAD 3.17848
283 4EA7 JB2 3.18182
284 4EA7 COA 3.18182
285 3GGO ENO 3.18471
286 3GGO NAI 3.18471
287 1LLU NAD 3.21637
288 4M52 FAD 3.21888
289 4M52 M52 3.21888
290 2A8X FAD 3.23276
291 4JNA FAD 3.23529
292 3HAD NAD 3.24675
293 1Q1R FAD 3.24826
294 2VT3 ATP 3.25581
295 2CDC XYP 3.27869
296 2CDC XYS 3.27869
297 2CDC NAP 3.27869
298 4KP7 NAP 3.27869
299 4KP7 1UQ 3.27869
300 4BJZ FAD 3.30189
301 4BJZ P3A 3.30189
302 3BAZ NAP 3.3033
303 2YG3 FAD 3.31126
304 6AA8 NAD 3.31126
305 5ZBC FAD 3.32594
306 1HKU NAD 3.35196
307 2B5W NAP 3.36134
308 2VWT PYR 3.37079
309 2VVM FAD 3.37553
310 2VVL FAD 3.37553
311 1PGP 6PG 3.37553
312 1UWK URO 3.37553
313 1UWK NAD 3.37553
314 6F97 FAD 3.37553
315 1ORR NAD 3.37553
316 1U8X NAD 3.38983
317 5ZYN FAD 3.39703
318 1OMO NAD 3.41615
319 2D2I NAP 3.42105
320 1E7S NAP 3.42679
321 5TUK FAD 3.43137
322 3TWO NDP 3.44828
323 4YKG NAD 3.45489
324 4YKG FAD 3.45489
325 4W6Z 8ID 3.45821
326 4OHU 2TK 3.46021
327 4OHU NAD 3.46021
328 2OBF F83 3.46021
329 5ZI9 FLC 3.46154
330 4RQU NAD 3.46667
331 2YY7 NAD 3.52564
332 4ZRN NAD 3.52564
333 4ZRN UPG 3.52564
334 3OZ2 FAD 3.52645
335 1G0N NDP 3.53357
336 1G0N PHH 3.53357
337 5A04 NDP 3.53982
338 5A04 BGC 3.53982
339 3PA8 621 3.54331
340 5G3U FDA 3.5461
341 5G3U ITW 3.5461
342 1GUZ NAD 3.54839
343 1GV0 NAD 3.54839
344 2G5C NAD 3.55872
345 1HYH NAD 3.55987
346 2NAD NAD 3.56234
347 3L4S 3PG 3.57143
348 3L4S NAD 3.57143
349 5KOX RFP 3.5865
350 5KOX FAD 3.5865
351 5HSA FAS 3.5865
352 2RGH FAD 3.5865
353 3IHG FAD 3.5865
354 3WBF NAP 3.60656
355 3WBF API 3.60656
356 5CG1 NAD BBN 3.60656
357 1BXK NAD 3.66197
358 3HB5 NAP 3.66972
359 2I3G NAP 3.69318
360 3K5I AIR 3.72208
361 1X14 NAD 3.74065
362 3SQP FAD 3.76569
363 1GTE FAD 3.79747
364 1DMH MCT 3.79747
365 4RSL FAD 3.82022
366 3K3G MMU 3.82353
367 3B1J NAD 3.83481
368 3B20 NAD 3.83481
369 4MP8 NAD 3.83481
370 4MP8 MLI 3.83481
371 1KJ8 GAR 3.83632
372 1UDB NAD 3.84615
373 1UDB UFG 3.84615
374 4MIG G3F 3.85802
375 4J4H 1J1 3.861
376 4J4H NAI 3.861
377 4JK3 NAD 3.861
378 5JCA NDP 3.87324
379 5JCA FAD 3.87324
380 1VDC FAD 3.9039
381 5X9D 80F 3.94737
382 1LDM NAD 3.95137
383 2RH4 EMO 3.97112
384 2CDU ADP 3.9823
385 2CDU FAD 3.9823
386 2QA1 FAD 4
387 1GET FAD 4
388 1GET NAP 4
389 4AP3 FAD 4.00844
390 4AP3 NAP 4.00844
391 3UCL FAD 4.00844
392 3UCL NAP 4.00844
393 3UCL CYH 4.00844
394 1KOL NAD 4.0201
395 5T9E NAP 4.05904
396 1NYT NAP 4.05904
397 4CJX NAP 4.07523
398 3QJ4 FAD 4.09357
399 5ZEC NAP 4.09357
400 3LU1 NAD 4.12088
401 4G5H NAP 4.13223
402 4G5H UD7 4.13223
403 4UP3 NDP 4.14013
404 4UP3 FAD 4.14013
405 5KKA 6V0 4.16667
406 1K3T BRZ 4.17827
407 4Z0H NAD 4.19162
408 4JCA CIT 4.19162
409 5EOW FAD 4.19753
410 1QG6 NAD 4.21456
411 1QG6 TCL 4.21456
412 1J0X NAD 4.21687
413 2GLX NDP 4.21687
414 1M2W NAD 4.21941
415 1LJ8 NAD 4.21941
416 4DSG UDP 4.21941
417 4DSG FAD 4.21941
418 1RP0 AHZ 4.22535
419 1H82 FAD 4.23729
420 1H82 GZZ 4.23729
421 1SOW NAD 4.26829
422 1KEV NDP 4.2735
423 4B4U NAP 4.29043
424 6GAR FAD 4.29799
425 1LTH NAD 4.38871
426 1EZ4 NAD 4.40252
427 5BRT FAD 4.43038
428 5BRT CH9 4.43038
429 1PN0 FAD 4.43038
430 1PN0 IPH 4.43038
431 1EBF NAD 4.46927
432 4NTC FAD 4.47761
433 4TM3 FAD 4.51467
434 2EV9 NAP 4.56274
435 2EV9 SKM 4.56274
436 1WPQ NAD 4.58453
437 2DFV NAD 4.61095
438 2AE2 PTO 4.61538
439 2AE2 NAP 4.61538
440 1YJQ NAP 4.62046
441 5H81 NAP 4.62725
442 2B4R NAD 4.63768
443 2B4R AES 4.63768
444 5MBX SP5 4.64135
445 5MBX FAD 4.64135
446 3AB1 FAD 4.64135
447 2YVF NAD 4.65686
448 2YVF FAD 4.65686
449 5TQZ GLC 4.66667
450 3C1O NAP 4.6729
451 1GZ6 NAI 4.70219
452 5IUC SIA GAL A2G 4.72441
453 2O4C NAD 4.73684
454 2DT5 NAD 4.73934
455 2Q1S NAI 4.77454
456 1ZK4 NAP 4.78088
457 3ORF NAD 4.78088
458 4XZ3 COA 4.78261
459 3HDY GDU 4.78589
460 3HDY FDA 4.78589
461 1E3I CXF 4.78723
462 2DBZ NAP 4.79042
463 1MUU NAD 4.81651
464 1HDG NAD 4.81928
465 2FZW NAD 4.82574
466 5EZ7 FAD 4.84694
467 5M67 3D1 4.85232
468 5M67 NAD 4.85232
469 5M67 ADE 4.85232
470 5YB7 FAD 4.85232
471 5YB7 ORN 4.85232
472 4AT0 FAD 4.85232
473 2HMT NAI 4.86111
474 3P13 RIP 4.86111
475 3B8I OXL 4.87805
476 4L80 OXL 4.88506
477 3EB9 FLC 4.88722
478 3CH6 NAP 4.8951
479 3CH6 311 4.8951
480 3OND NAD 4.91803
481 3OND ADN 4.91803
482 1SC6 NAD 4.9505
483 1RYI GOA 4.97382
484 1RYI FAD 4.97382
485 3AB4 THR 5.05618
486 2IID FAD 5.06329
487 2IID PHE 5.06329
488 3AYI FAD 5.06329
489 3AYI HCI 5.06329
490 2BRY FAD 5.06329
491 4TXI FAD 5.06329
492 1NAA ABL 5.06329
493 1NAA 6FA 5.06329
494 5BUK FAD 5.11111
495 1YKF NAP 5.11364
496 1SB8 UD2 5.11364
497 1SB8 NAD 5.11364
498 4KQW NAP 5.14286
499 1OC2 NAD 5.17241
500 1OC2 TDX 5.17241
501 1N1G BCP 5.19126
502 4XYM COA 5.21739
503 1FWV SGA MAG FUC 5.22388
504 4EIP FAD 5.27426
505 4EIP K2C 5.27426
506 1CDO NAD 5.27426
507 1MV8 NAD 5.27523
508 5JE8 NAD 5.29801
509 1I36 NAP 5.30303
510 1VI2 NAD 5.33333
511 4L8V NAP 5.34125
512 5L4S NAP 5.34591
513 5L4S 6KX 5.34591
514 5JWC FAD 5.37428
515 1WDK NAD 5.38462
516 6BII NAP 5.40541
517 1G6H ADP 5.44747
518 3KO8 NAD 5.44872
519 1GAD NAD 5.45455
520 1JNR FAD 5.48523
521 2YVJ FAD 5.50459
522 2YVJ NAI 5.50459
523 3VYW SAM 5.51948
524 5EIN NAP 5.55556
525 2NU8 COA 5.55556
526 1NPD NAD 5.55556
527 1XXR MAN 5.59006
528 1D1T NAD 5.63003
529 5EES NAP 5.66802
530 4OOE NDP 5.69307
531 4OOE FOM 5.69307
532 5U8U FAD 5.6962
533 5OC1 FAD 5.6962
534 4YNU FAD 5.6962
535 4YNU LGC 5.6962
536 1QMG APX 5.6962
537 1V6A TRE 5.72289
538 1SDW IYT 5.73248
539 5BSH PRO 5.77617
540 3OJO NAD 5.80046
541 1FL2 FAD 5.80645
542 3OJF NDP 5.83658
543 3OJF IMJ 5.83658
544 2JHF NAD 5.88235
545 3F8D FAD 5.88235
546 1NE7 AGP 5.88235
547 2NVK NAP 5.90717
548 2NVK FAD 5.90717
549 5K4W NAI 5.919
550 5K4W THR 5.919
551 3C7A NAD 5.94059
552 1A5Z NAD 5.95611
553 3WV8 ATP 5.9633
554 3GFB NAD 6
555 5NM7 GLY 6.01504
556 5MIT FAD 6.11621
557 5MIT NAP 6.11621
558 1ZBQ NAD 6.11621
559 2HQM FAD 6.11814
560 5Z2L NDP 6.12245
561 1UXG FUM 6.14887
562 1UXG NAD 6.14887
563 2AHR NAP 6.17761
564 4MDB RLT 6.22222
565 2A92 NAI 6.23053
566 3K7M FAD 6.2645
567 5UR0 NAD 6.30372
568 1J5P NAD 6.32411
569 6A0S NDP 6.3253
570 6A0S HSE 6.3253
571 1RSG FAD 6.32911
572 2ZXI FAD 6.32911
573 3Q3C NAD 6.35452
574 4USQ FAD 6.37119
575 1U1I NAD 6.37755
576 1V35 NAI 6.38298
577 4D3F NAP 6.45161
578 1DLJ NAI 6.46766
579 1DLJ UGA 6.46766
580 3ITJ FAD 6.50888
581 3ITJ CIT 6.50888
582 5TVI O8N 6.52174
583 2IVD FAD 6.54008
584 3KB6 NAD 6.58683
585 5VKT NAP 6.62983
586 3DAG FEG 6.70391
587 5X20 NAD 6.73077
588 6FP4 E1T 6.75105
589 6FP4 FAD 6.75105
590 2Y6Q I7T 6.78392
591 2Y6Q FAD 6.78392
592 5UAV NDP 6.8323
593 5UAV TFB 6.8323
594 4ZCC FAD 6.84524
595 4ZCC NAI 6.84524
596 1NM5 NAD 6.89655
597 1NM5 NAP 6.89655
598 1KYQ NAD 6.93431
599 5ZI2 ADP 6.95652
600 5ZI2 NAD 6.95652
601 2IZ1 ATR 6.96203
602 2Q46 NAP 6.96203
603 1NVT NAP 6.96864
604 1E6E FAD 7.03125
605 5DN9 NAD 7.14286
606 1LSS NAD 7.14286
607 5ZZ6 NAD 7.21154
608 5ZZ6 ADP 7.21154
609 3HVJ 705 7.23982
610 2Q7V FAD 7.38462
611 2C5A NAD 7.38786
612 2C5A GDC 7.38786
613 1VL8 NAP 7.49064
614 3H8V ATP 7.53425
615 1JAY NAP 7.54717
616 4IV9 FAD 7.59494
617 4CQM NAP 7.66284
618 2V5K OXM 7.66551
619 1HYE NAP 7.66773
620 2JK0 ASP 7.69231
621 4GLL NAD 7.71513
622 2J73 GLC GLC GLC 7.76699
623 1KNR FAD 7.80591
624 2F5Z FAD 7.8125
625 1H5Q NAP 7.92453
626 3B1F NAD 7.93103
627 2B4Q NAP 7.97101
628 4YSX FAD 7.97872
629 5E5U MLI 8.0402
630 2QRK AMP 8.12183
631 1ZK7 FAD 8.13704
632 3OA2 NAD 8.1761
633 2GCG NDP 8.18182
634 2GUD BMA 8.19672
635 2GUD MAN 8.19672
636 2GUC MAN 8.19672
637 2NU5 NAG 8.19672
638 2NUO BGC 8.19672
639 2HYR BGC GLC 8.19672
640 2HYQ MAN MAN 8.19672
641 1O94 ADP 8.33333
642 2HK9 ATR 8.36364
643 2HK9 NAP 8.36364
644 4HXY NDP 8.44749
645 5CAE SIN 8.60759
646 5CAE COA 8.60759
647 5AOV NAP 8.63095
648 4J56 FAD 8.64979
649 2WSB NAD 8.66142
650 4XYB NDP 8.69565
651 2WYV NAD 8.81226
652 1PVC ILE SER GLU VAL 8.82353
653 2WPF FAD 8.86076
654 2WPF WPF 8.86076
655 1LDN NAD 8.86076
656 3RFV NAI 8.98876
657 1J49 NAD 9.00901
658 5O9F NAD 9.09091
659 5O9F 9ON 9.09091
660 5N0J FAD 9.11681
661 3A4V PYR 9.14826
662 3A4V NAD 9.14826
663 4OPC PGT 9.27152
664 4OPC FDA 9.27152
665 4JJF N2I 9.30233
666 4JJF FE9 9.30233
667 1Q0H NDP 9.35961
668 1Q0H FOM 9.35961
669 4RDH AMP 9.375
670 4RDI ATP 9.375
671 3OIG NAD 9.3985
672 1NVM NAD 9.56522
673 2Q0L FAD 9.6463
674 2Q0L NAP 9.6463
675 1B09 PC 9.70874
676 4CNK FAD 9.71867
677 3QV1 NAD 9.7561
678 4D79 ATP 9.78261
679 1TKU 5RP 9.80392
680 1N7G NDP 9.91561
681 1N7G GDR 9.91561
682 5TWB FAD 10.1744
683 2Q1W NAD 10.2102
684 5N6C NAD 10.3333
685 4BVA NDP 10.7463
686 4BVA T3 10.7463
687 1O6Z NAD 10.8911
688 2OOR NAD 10.9195
689 3AD8 PYC 11.33
690 3AD8 FAD 11.33
691 3AD8 NAD 11.33
692 3ABI NAD 11.7808
693 3BFV ADP 11.8081
694 3OID NDP 12.0155
695 3FG2 FAD 12.3762
696 1WP4 NDP 12.4567
697 2CVZ NDP 12.4567
698 3RJ5 NAD 12.5984
699 4USR FAD 12.7424
700 2GN4 NDP 12.7907
701 2GN4 UD1 12.7907
702 1XKQ NDP 12.8571
703 1PJS NAD 12.9103
704 5ODQ FAD 13.0435
705 3BMN NAP 13.1944
706 4CM9 NAP 13.1944
707 4CMI NAP 13.1944
708 3JQG NAP 13.1944
709 3BMO NAP 13.1944
710 4CM8 NAP 13.1944
711 3JQ9 NAP 13.1944
712 4CM4 NAP 13.1944
713 4CLR NAP 13.1944
714 3BMQ NAP 13.1944
715 3JQF NAP 13.1944
716 3JQA NAP 13.1944
717 3JQB NAP 13.1944
718 4CME NAP 13.1944
719 3JQ7 NAP 13.1944
720 4CLO NAP 13.1944
721 3JQ8 NAP 13.1944
722 5A1T OXM 13.2911
723 5A1T NAI 13.2911
724 5FI3 NAP 13.4454
725 5L95 AMP 13.75
726 3RNM FAD 13.7931
727 5JCM ISD 13.969
728 5JCM NAD 13.969
729 5JCM FAD 13.969
730 2F1K NAP 13.9785
731 2VZ0 D64 14.1791
732 2VZ0 NAP 14.1791
733 2WD7 NAP 14.1791
734 5N2I NAP 14.2241
735 5NUE NAD 15.3614
736 5NUF NAD 15.3614
737 1RPN NDP 15.8209
738 5YEC ATP 16.8067
739 1YQD NAP 18.0328
740 1P77 ATR 19.1176
741 4II2 ATP 22.8916
742 3QFA FAD 23.2759
743 1NNU TCT 23.3333
744 1NNU NAD 23.3333
745 4ZGR NGA GAL 27.1255
Pocket No.: 2; Query (leader) PDB : 6C4M; Ligand: NAP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 6c4m.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
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