-->
Receptor
PDB id Resolution Class Description Source Keywords
6G14 1.8 Å EC: 3.-.-.- CRYSTAL STRUCTURE OF PPGPP BOUND RBGA FROM S. AUREUS STAPHYLOCOCCUS AUREUS (STRAIN USA300) CPGTPASE RNA BINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR (P)PPGPP-MEDIATED INHIBITION O GTPASE RBGA. J. BIOL. CHEM. V. 293 19699 2018
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
G4P A:301;
B:301;
Valid;
Valid;
none;
none;
Kd = 3.26 uM
603.16 C10 H17 N5 O17 P4 c1nc2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6G14 1.8 Å EC: 3.-.-.- CRYSTAL STRUCTURE OF PPGPP BOUND RBGA FROM S. AUREUS STAPHYLOCOCCUS AUREUS (STRAIN USA300) CPGTPASE RNA BINDING PROTEIN
Ref.: STRUCTURAL BASIS FOR (P)PPGPP-MEDIATED INHIBITION O GTPASE RBGA. J. BIOL. CHEM. V. 293 19699 2018
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 253 families.
1 6G12 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 6G14 Kd = 3.26 uM G4P C10 H17 N5 O17 P4 c1nc2c(n1[....
3 6G15 Kd = 4.31 uM C1Z C10 H18 N5 O20 P5 c1nc2c(n1[....
4 6G0Z Kd = 4.84 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 6G12 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 6G14 Kd = 3.26 uM G4P C10 H17 N5 O17 P4 c1nc2c(n1[....
3 6G15 Kd = 4.31 uM C1Z C10 H18 N5 O20 P5 c1nc2c(n1[....
4 6G0Z Kd = 4.84 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
5 1PUJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (8)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 173 families.
1 6G12 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 6G14 Kd = 3.26 uM G4P C10 H17 N5 O17 P4 c1nc2c(n1[....
3 6G15 Kd = 4.31 uM C1Z C10 H18 N5 O20 P5 c1nc2c(n1[....
4 6G0Z Kd = 4.84 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
5 1PUJ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 3CNN - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
7 3CNL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 3CNO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: G4P; Similar ligands found: 103
No: Ligand ECFP6 Tc MDL keys Tc
1 G4P 1 1
2 0O2 0.905882 1
3 G3D 0.879518 1
4 GDP 0.715909 0.986486
5 3GP 0.674419 0.959459
6 GTP 0.655914 0.986486
7 GCP G 0.646465 0.933333
8 BGO 0.638889 0.935897
9 GNH 0.634409 0.973333
10 GP3 0.630435 0.960526
11 GSP 0.625 0.935897
12 GNP 0.625 0.960526
13 9GM 0.625 0.960526
14 DGI 0.606383 0.935065
15 5GP 0.604396 0.972973
16 G 0.604396 0.972973
17 G1R 0.597938 0.973333
18 GCP 0.597938 0.960526
19 GDC 0.596154 0.948052
20 GKE 0.596154 0.948052
21 GDD 0.596154 0.948052
22 GAV 0.59596 0.948052
23 G G 0.590476 0.935065
24 GPX 0.59 0.959459
25 GPG 0.588235 0.948052
26 GMP 0.588235 0.866667
27 G2P 0.575758 0.948052
28 C1Z 0.572816 1
29 GMV 0.571429 0.960526
30 GH3 0.57 0.986486
31 2GP 0.565217 0.972973
32 GGM 0.565217 0.9125
33 G2R 0.563107 0.948052
34 GDR 0.560748 0.948052
35 GFB 0.560748 0.948052
36 GP2 0.556701 0.948052
37 6CK 0.555556 0.924051
38 ALF 5GP 0.555556 0.876543
39 DGT 0.55 0.935065
40 G A A A 0.547009 0.910256
41 GKD 0.545455 0.948052
42 JB2 0.545455 0.948052
43 CG2 0.543103 0.924051
44 GPD 0.540541 0.9125
45 GDX 0.540541 0.960526
46 GDP AF3 0.538462 0.876543
47 G G G RPC 0.538462 0.886076
48 G C 0.538462 0.8875
49 GDP ALF 0.538462 0.876543
50 ALF GDP 0.538462 0.876543
51 Y9Z 0.537037 0.890244
52 G5P 0.536364 0.960526
53 A G 0.533898 0.922078
54 GTG 0.53211 0.924051
55 U A G G 0.529412 0.922078
56 G3A 0.527273 0.960526
57 U2G 0.525862 0.924051
58 G U 0.521368 0.8875
59 APC G U 0.520661 0.897436
60 JB3 0.517241 0.935897
61 YGP 0.513761 0.888889
62 G G G C 0.512195 0.9
63 A G C C 0.508065 0.898734
64 NGD 0.5 0.948052
65 GDP 7MG 0.495575 0.898734
66 DG 0.494845 0.922078
67 DGP 0.494845 0.922078
68 G C C C 0.492188 0.911392
69 P2G 0.489796 0.894737
70 CAG 0.487805 0.869048
71 GPC 0.487805 0.86747
72 2MD 0.487603 0.879518
73 FEG 0.487395 0.86747
74 G U34 0.483333 0.876543
75 ZGP 0.483333 0.857143
76 P1G 0.48 0.883117
77 DBG 0.476562 0.935897
78 MGD 0.475806 0.879518
79 PAP 0.475248 0.918919
80 A G U 0.470588 0.876543
81 TPG 0.465116 0.829545
82 UCG 0.461538 0.923077
83 MD1 0.460938 0.879518
84 DG DG 0.459459 0.876543
85 G1G 0.456693 0.9125
86 A G U U 0.453901 0.876543
87 PGD 0.449612 0.9125
88 IDP 0.446602 0.959459
89 CGP 0.443548 0.878049
90 G4M 0.442029 0.869048
91 AKW 0.439024 0.878049
92 G1R G1R 0.431818 0.911392
93 SGP 0.431373 0.8375
94 FE9 0.430769 0.765957
95 PGD O 0.428571 0.83908
96 DC DG 0.428571 0.855422
97 5GP 5GP 0.424528 0.894737
98 35G 0.415094 0.945946
99 C2E 0.415094 0.933333
100 PCG 0.415094 0.945946
101 AGO 0.414062 0.9
102 MGP 0.40367 0.948052
103 6G0 0.4 0.948052
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6G14; Ligand: G4P; Similar sites found with APoc: 631
This union binding pocket(no: 1) in the query (biounit: 6g14.bio1) has 18 residues
No: Leader PDB Ligand Sequence Similarity
1 1SVM ATP 1.02041
2 5J1J ANP 1.05263
3 3EZ2 ADP 1.36054
4 2GMV UN8 1.36054
5 2GMV PEP 1.36054
6 1NHX FTB 1.36054
7 1NHX PEP 1.36054
8 2OFW ADX 1.44231
9 2PEZ DAT 1.67598
10 2PEZ GGZ 1.67598
11 2XTZ GSP 1.70068
12 1YTM ATP 1.70068
13 1OS1 PYR 1.70068
14 1OS1 ATP 1.70068
15 5LTJ ADP 1.70068
16 5LTJ BEF 1.70068
17 5MEX SZZ 1.70068
18 5MEX PAP 1.70068
19 4YDS ATP 1.75439
20 4WOP CTP 1.77778
21 4WEI GLC GAL 1.80505
22 4QRH 0O2 1.90476
23 1UJ2 ADP 1.98413
24 1UJ2 C5P 1.98413
25 1F9V ADP 2.04082
26 3EWA ANP 2.04082
27 6H3O FAD 2.04082
28 4MOP 2H5 2.04082
29 3RC3 ANP 2.04082
30 3BC1 GNP 2.05128
31 1ION ADP 2.05761
32 4LPS GDP 2.06612
33 5OCQ CIT 2.10526
34 3CX8 GSP 2.38095
35 4P4T GDP 2.38095
36 1ZCB GDP 2.38095
37 1P9B GDP 2.38095
38 5I34 GDP 2.38095
39 1XMV ADP 2.38095
40 3BFX A3P 2.38095
41 2ZPT A3P 2.38095
42 3QVV A3P 2.38095
43 3QVV 3QV 2.38095
44 6F97 FAD 2.38095
45 2OWZ CIT 2.38095
46 2FSH ANP 2.38095
47 1AQU A3P 2.38095
48 4PX9 ADP 2.39726
49 2F3R G5P 2.41546
50 3BD9 A3P 2.5
51 5NM7 GLY 2.63158
52 4CS9 AMP 2.6455
53 1GOJ ADP 2.72109
54 2VVG ADP 2.72109
55 3FWY ADP 2.72109
56 2OBM ADP 2.72109
57 2DPY ADP 2.72109
58 4GOX A3P 2.72109
59 2OZE AGS 2.72109
60 3LRE ADP 2.72109
61 1RRC ADP 2.72109
62 5FHD ADP ALF 2.72109
63 5FTB ANP 2.72109
64 3TBK ANP 2.72109
65 1X8J A3P 2.72109
66 3KJI ADP 2.75591
67 4WZ6 ATP 2.75862
68 1FP6 ADP 2.76817
69 1Z08 GNP 2.94118
70 1BO4 COA 2.97619
71 3B7G ANP 3.04348
72 3COB ADP 3.06122
73 3DC4 ADP 3.06122
74 1IZC PYR 3.06122
75 1D6Z HY1 3.06122
76 4G86 BNT 3.16901
77 6AIC AMP 3.27103
78 1T8U UAP SGN IDS SGN 3.30882
79 1T8U A3P 3.30882
80 4JLV ADP 3.34572
81 1TQ4 GDP 3.40136
82 1IWE IMP 3.40136
83 5K5Z ANP 3.40136
84 5LB3 ADP 3.40136
85 4GBM A3P 3.40136
86 1Z6T ADP 3.40136
87 3QKT ANP 3.40136
88 4IOK XPO 3.40136
89 4IOK ADP 3.40136
90 6B4K ANP 3.40136
91 1KO8 6PG 3.42857
92 2PZE ATP 3.49345
93 1VKJ A3P 3.50877
94 1QF9 ALF 3.60825
95 1QF9 ADP 3.60825
96 1QF9 C5P 3.60825
97 3DKP ADP 3.67347
98 4KVA GTP 3.7415
99 3ZQ6 ADP ALF 3.7415
100 2GKS ADP 3.7415
101 1XP8 AGS 3.7415
102 1NY5 ADP 3.7415
103 2IS6 ADP 3.7415
104 3FVQ ATP 3.7415
105 1G3M PCQ 3.7415
106 1G3M A3P 3.7415
107 1W5T ADP 3.7415
108 1W5T ANP 3.7415
109 1R0X ATP 3.84615
110 1JJV ATP 3.8835
111 5G3Y ADP 3.9823
112 3UIE ANP 4
113 6B8B ADP 4.01606
114 3BER AMP 4.01606
115 5ZB0 TYD 4.0404
116 5ZB0 ADP 4.0404
117 5TSH ADP 4.08163
118 4NE2 SH2 4.08163
119 4NE2 ADP 4.08163
120 5TSH ANP 4.08163
121 4XGU ADP 4.08163
122 1SQ5 ADP 4.08163
123 5IRN ADP 4.08163
124 4R43 GDP 4.08163
125 4FCW ADP 4.08163
126 4YJ1 ADP 4.08163
127 2ZPA ADP 4.08163
128 1Q20 PLO 4.08163
129 1Q20 A3P 4.08163
130 4A4Z ANP 4.08163
131 5X40 ACP 4.10959
132 1YVD GNP 4.14201
133 1NN5 ANP 4.18605
134 1NN5 2DT 4.18605
135 5HCN GCP 4.21456
136 5EXT ADP 4.23077
137 1L2T ATP 4.25532
138 1G6H ADP 4.28016
139 4R2I ANP 4.28571
140 2ZE7 AMP 4.34783
141 2ZE7 DST 4.34783
142 4K4D HFQ 4.37956
143 1SKQ GDP 4.42177
144 3WYA GDP 4.42177
145 2C78 GNP 4.42177
146 2C77 GNP 4.42177
147 4RD0 GDP 4.42177
148 5M04 GDP 4.42177
149 4ZKD GDP 4.42177
150 3VMF GTP 4.42177
151 3WXM GTP 4.42177
152 5AK0 8V1 4.42177
153 2BIF SIN 4.42177
154 2BIF ANP 4.42177
155 1V8K ANP 4.42177
156 5HR5 ADP 4.42177
157 1G41 ADP 4.42177
158 2Q2Y ADP 4.42177
159 2Q2Y MKR 4.42177
160 1OFH ADP 4.42177
161 1K6M AGS 4.42177
162 1OYY AGS 4.42177
163 1UKZ ADP 4.4335
164 5XKT GNP 4.5
165 2QG6 NMN 4.52261
166 4DDY DN6 4.56274
167 5H4S RAM 4.57746
168 1B0U ATP 4.58015
169 1VHT BA3 4.58716
170 4D81 ADP 4.59364
171 3Q9L ATP 4.61538
172 2ZX2 RAM 4.61538
173 4X8O AP5 4.6729
174 1UCD U5P 4.73684
175 5GOE GDP 4.7619
176 4WZA ADP 4.7619
177 4WZA ACP 4.7619
178 5WC2 ADP 4.7619
179 4KVG GTP 4.7619
180 1OXV ANP 4.7619
181 2AWN ADP 4.7619
182 4PFO ADP 4.7619
183 2Z5F A3P 4.7619
184 2VB6 ADP BEF 4.7619
185 1NST A3P 4.7619
186 4YS0 ADP 4.7619
187 1XPJ TLA 4.7619
188 3RLF ANP 4.7619
189 1RJW ETF 4.7619
190 2J5V PCA 4.7619
191 2X7I CIT 4.7619
192 3IUY AMP 4.82456
193 2VBQ BSJ 4.84848
194 3QXC ATP 4.95868
195 1YRB GDP 4.96183
196 3A4M ADP 5
197 4YMU ATP 5
198 1JJ7 ADP 5
199 4V03 ADP 5.05837
200 1ZIN AP5 5.06912
201 5CK5 GDP 5.10204
202 2XT3 ADP 5.10204
203 3E70 GDP 5.10204
204 1WDT GTP 5.10204
205 4H1V GNP 5.10204
206 4XTR ATP 5.10204
207 2WOJ ADP ALF 5.10204
208 4XVU ATP 5.10204
209 4XTR ADP 5.10204
210 4BFW ZVW 5.10204
211 1LVK MNT BEF 5.10204
212 4HSE ADP 5.10204
213 1XKV ATP 5.10204
214 3HQ9 OXL 5.10204
215 2O0J ADP 5.10204
216 5GVR LMR 5.12821
217 4QOS ADP 5.28302
218 5KUT GDP 5.29101
219 4E03 ADP 5.33981
220 2RGX AP5 5.33981
221 3B5J 12D 5.34979
222 5HPY GDP 5.40541
223 5W7Q GDP 5.44218
224 6CS8 F9Y 5.44218
225 2ZR9 DTP 5.44218
226 5ZXD ATP 5.44218
227 5IRR GSP 5.44218
228 3FKQ ATP 5.44218
229 3P4X ADP 5.44218
230 2H7C SIA 5.44218
231 1D2N ANP 5.51471
232 4MKF AP5 5.52995
233 4DKX GDP 5.55556
234 3TMK T5A 5.55556
235 1KSK URA 5.55556
236 4XSH GSP 5.58659
237 1X1R GDP 5.61798
238 3AB3 GDP 5.69106
239 1UAD GNP 5.71429
240 2YOH WMJ 5.71429
241 4U00 ADP 5.7377
242 3KTA AP5 5.78035
243 3PCR GTP 5.78231
244 2RCN GDP 5.78231
245 2OG2 MLI 5.78231
246 5Y6N ADP 5.78231
247 3B9Q MLI 5.78231
248 3BOS CDP 5.78512
249 5L3R GCP 5.80205
250 5G41 AP5 5.8296
251 4QM7 GTP 5.84795
252 1EK0 GNP 5.88235
253 1FNN ADP 5.9126
254 1U8Z GDP 5.95238
255 4MKG AP5 5.99078
256 5FG3 GDP 6.12245
257 4LYA ATP 6.12245
258 3IO3 ADP 6.12245
259 2C9O ADP 6.12245
260 3NHB ADP 6.12245
261 5XDR ADP 6.12245
262 4U5X GNP 6.17978
263 3H86 AP5 6.25
264 1XX6 ADP 6.28272
265 4HUT ATP 6.28272
266 5KSP GDP 6.31579
267 1Z0A GDP 6.32184
268 3GJ7 GDP 6.33484
269 3GJ4 GDP 6.33484
270 3GJ5 GDP 6.33484
271 3GJ8 GDP 6.33484
272 1AKY AP5 6.36364
273 2QN6 GDP 6.45161
274 1S3G AP5 6.45161
275 1G7S GDP 6.46258
276 3TK1 GDP 6.46258
277 5L3W GDP 6.46258
278 1CR1 TTP 6.46258
279 3ZFD ANP 6.46258
280 3H4S ADP 6.46258
281 4FRZ ADP 6.46258
282 2FNA ADP 6.46258
283 4IEE AGS 6.46258
284 4D0N GDP 6.48649
285 5TB5 GDP 6.48649
286 5TAR GDP 6.48649
287 3LXR GDP 6.48649
288 6BC0 GSP 6.48649
289 6BCB GSP 6.48649
290 6BCA GSP 6.48649
291 3Q85 GNP 6.50888
292 1ZUI SKM 6.54762
293 5BYK A3P 6.56371
294 5BYK OAQ 6.56371
295 1GXU 2HP 6.59341
296 3Q72 GNP 6.62651
297 2UZI GTP 6.62651
298 1JI0 ATP 6.66667
299 1DAK ADP 6.69643
300 1DAK DPU 6.69643
301 2CJW GDP 6.77083
302 1FQJ GDP 6.80272
303 1E2K TMC 6.80272
304 6C0B MLI 6.80272
305 4DP3 MMV 6.80272
306 4DP3 NDP 6.80272
307 1WRA PC 6.80272
308 2JAQ DCP 6.82927
309 2ORV 4TA 6.83761
310 2QZ4 ADP 6.87023
311 1RYH GNP 6.89655
312 4NU0 AP5 6.91244
313 2BEK ATP 7.00389
314 2FFQ GSP 7.01754
315 4M9Q GNP 7.04846
316 1YZQ GNP 7.05882
317 4UXH T5A 7.06522
318 1LVG ADP 7.07071
319 2J0V GDP 7.07547
320 2HF9 GSP 7.07965
321 4HI0 GDP 7.08661
322 1DAR GDP 7.14286
323 4RZ3 ADP 7.14286
324 5VHC BEF ADP 7.14286
325 5IFS ADP 7.173
326 2EFE GNH 7.18232
327 1CLU DBG 7.22892
328 1I4D GDP 7.29167
329 1DS6 GDP 7.29167
330 3WYF GTP 7.30594
331 3M1I GTP 7.30594
332 3BFV ADP 7.38007
333 5MVR ADP 7.40741
334 2HT6 GDP 7.47126
335 2WKQ GTP 7.48299
336 5M7P ADP 7.48299
337 5Z69 AGS 7.48299
338 5H68 AGS 7.48299
339 1P72 ADP 7.48299
340 3SBD GNP 7.48663
341 2W2X GSP 7.56757
342 1G4U GDP 7.6087
343 2B8T THM 7.62332
344 1G16 GDP 7.64706
345 4K81 GTP 7.75194
346 1E96 GTP 7.8125
347 1KK1 GNP 7.82313
348 4IDN GNP 7.82313
349 2CE7 ADP 7.82313
350 3DZD ADP 7.82313
351 2D7D ADP 7.82313
352 2FJU GSP 7.86517
353 2CHG ANP 7.9646
354 4LJ9 ACP 7.9646
355 5UWQ GNP 8.01688
356 5UWP GNP 8.01688
357 5UWU GNP 8.01688
358 5UWH GNP 8.01688
359 5DIF GNP 8.01688
360 5UWS GNP 8.01688
361 5UWO GNP 8.01688
362 5UWI GNP 8.01688
363 6CIT GNP 8.01688
364 5UWW GNP 8.01688
365 5UWT GNP 8.01688
366 5DHF GNP 8.01688
367 5UWR GNP 8.01688
368 5UWJ GNP 8.01688
369 5E5U MLI 8.0402
370 1F2U ATP 8.05369
371 1MH1 GNP 8.06452
372 2ZEJ GDP 8.15217
373 1Y63 ADP 8.15217
374 4TMZ GSP 8.16327
375 3TKL GTP 8.16327
376 4NCN GTP 8.16327
377 1I0B PEL 8.16327
378 1J99 AND 8.19113
379 1VG0 GDP 8.21256
380 1VG8 GNP 8.21256
381 1GUA GNP 8.38323
382 1DR1 NAP 8.46561
383 1DR1 HBI 8.46561
384 1Z0J GTP 8.47458
385 4ZG4 VO4 ADP 8.5034
386 6FAA ADP 8.5034
387 2WZF BGC 8.5034
388 1HE1 GDP 8.52273
389 4BAS GNP 8.54271
390 3GJ3 GDP 8.59729
391 1U0J ADP 8.61423
392 3CH5 GDP 8.7963
393 4HAT GNP 8.7963
394 3GJX GTP 8.7963
395 1MR3 G3D 8.83978
396 6AU6 GDP 8.84354
397 1CS4 GSP 8.84354
398 1RJ9 GCP 8.84354
399 2XAU ADP 8.84354
400 5MZN ADP 8.84354
401 3DOE GTP 8.85417
402 2A5J GDP 8.90052
403 4HDO GNP 8.98204
404 3X1Z GNP 8.98204
405 1M7G AV2 9.00474
406 1M7G ADX 9.00474
407 1M7G ADP 9.00474
408 3T12 GDP ALF 9.09091
409 3T1O GDP 9.09091
410 4ZNL BEF ADP 9.12409
411 1KSH GDP 9.13978
412 5SZH GNP 9.15033
413 2IYL GDP 9.15493
414 1D2E GDP 9.18367
415 5WRJ A3P 9.18367
416 5WRI A3P 9.18367
417 1VG1 GDP 9.18919
418 1VG9 GDP 9.18919
419 1GWN GTP 9.26829
420 5OEC GDP 9.28962
421 5U32 GDP 9.32203
422 4ITR GDP 9.42408
423 1YZG GDP 9.49721
424 5J1S ATP 9.50704
425 5W75 GDP 9.52381
426 5UQW GDP 9.52381
427 2ODE ALF GDP 9.52381
428 5OCG GNP 9.52381
429 4OHY ANP 9.52381
430 1F6B GDP 9.59596
431 1ZJ6 G3D 9.62567
432 2CBZ ATP 9.70464
433 4TTQ ATP 9.76744
434 5KSZ GCP 9.86395
435 1IHU AF3 9.86395
436 1IHU ADP 9.86395
437 5ZBR ANP 9.86395
438 6A20 ADP 9.86395
439 3KUD GDP 9.87654
440 1KY3 GDP 9.89011
441 1XEX ATP 9.89011
442 2EW1 GNP 9.95025
443 2GCO GNP 9.95025
444 2GCN GDP 9.95025
445 1UPT GTP 10
446 1ZD9 GDP 10.1064
447 2VOH CIT 10.1911
448 5H7J GCP 10.2041
449 5H7K GDP 10.2041
450 5JCP GDP ALF 10.2041
451 2FAH GDP 10.2041
452 1T5C ADP 10.2041
453 4BQS K2Q 10.2273
454 4BQS ADP 10.2273
455 1W4R TTP 10.2564
456 1YZN GNP 10.2703
457 5TIV A3P 10.2767
458 1S9D GDP 10.3659
459 1RE0 GDP 10.3659
460 4XOI GTP 10.3704
461 2CDN ADP 10.4478
462 5EE5 GTP 10.5263
463 5BN3 ADP 10.5442
464 1F5N GNP 10.5442
465 5N69 ADP 10.5528
466 5LLB 6YZ 10.6464
467 4V0K GDP 10.6509
468 1Z83 AP5 10.7143
469 1H65 GDP 10.7407
470 2ZTS ADP 10.757
471 1WA5 GTP 10.7955
472 4TMK T5A 10.7981
473 1NJF ADP 10.8
474 1NJF AGS 10.8
475 1O3Y GTP 10.8434
476 4PPF FLC 10.8844
477 4IHQ ADP 10.8844
478 2GWH A3P 10.8844
479 3ZIA ATP 11.1111
480 3ZIA ADP 11.1111
481 1QF5 GDP 11.2245
482 1QF5 RPL 11.2245
483 2WIC GNP 11.236
484 4R98 GNH 11.4391
485 5H67 ATP 11.5578
486 4PJ3 ANP 11.5646
487 5DI3 GNP 11.8919
488 5UIV ADP 11.8943
489 2Y65 ADP 11.9048
490 5VGR GDP 11.9048
491 1W7J ADP BEF 11.9205
492 3AQ4 GDP 11.9565
493 1M7B GTP 11.9565
494 4ZI2 GNP 12.1053
495 4YLG GDP 12.1387
496 1FZQ GDP 12.1547
497 4GOJ GNP 12.1693
498 3IIJ ADP 12.2222
499 4TL6 ANP 12.253
500 1TU3 GNP 12.2807
501 1R2Q GNP 12.3529
502 3WY9 GDP 12.5
503 3MJH GTP 12.5
504 3CPJ GDP 12.585
505 2BCG GDP 12.585
506 3T34 GDP 12.585
507 2W58 ADP 12.8713
508 4ZDJ UTP 12.9252
509 2PL3 ADP 13.1356
510 1BG2 ADP 13.2653
511 1B7T ADP 13.4615
512 1M2O GNP 13.6842
513 2J59 GTP 13.6905
514 1NRJ GTP 13.7615
515 4DID GDP 13.9896
516 2WMO GTP 14.2105
517 2WHX ADP 14.2857
518 2JLR ANP 14.2857
519 1G3Q ADP 14.346
520 2A9K GDP 14.3498
521 2BME GNP 14.5161
522 4YC7 GNP 14.9171
523 2GK6 ADP 14.966
524 2F9L GDP 15.0754
525 2Y8E GNP 15.0838
526 1KK8 BEF ADP 15.1079
527 5WDR GNP 15.2047
528 3PQC GDP 15.3846
529 6C90 ADP 15.3846
530 2A5F GTP 15.4286
531 4B47 GDP 15.6463
532 1W0J ADP 15.6463
533 1W0J ADP BEF 15.6463
534 3RWO GDP 15.6757
535 1R4A GNP 15.6863
536 1OIV GDP 15.7068
537 2W83 GTP 15.7576
538 3ZS9 ADP ALF 15.7895
539 2FH5 GTP 15.8879
540 3A1S GDP 15.8915
541 1ZC3 GNP 15.9292
542 4KAX GTP 15.9763
543 2KIN ADP 16
544 3N5C GDP 16.0494
545 1OIX GDP 16.2304
546 2C5L GTP 16.2393
547 1Z0K GTP 16.2791
548 1S8F GDP 16.3842
549 4OI4 ATP 16.5217
550 5O2T GSP 16.568
551 3T5G GDP 16.5746
552 3SFV GDP 16.5746
553 5O74 GDP 16.6667
554 5UPK GNP 16.6667
555 3FB4 AP5 16.6667
556 1Z0F GDP 16.7598
557 5JCZ GDP 16.7598
558 1KAO GDP 16.7665
559 6BSX GDP 16.8539
560 6BSX E7S 16.8539
561 3DDC GNP 16.8675
562 4LX0 BEF GDP 16.9492
563 1HTW ADP 17.0886
564 3NKV GNP 17.1429
565 3QBT GNP 17.2414
566 3TNF GNP 17.2414
567 4C4P GNP 17.341
568 1Z06 GNP 17.4603
569 2ZFI ADP 17.4863
570 2WJG GDP 17.5532
571 4NON GDP 17.6923
572 4D0G GTP 17.7143
573 4LHW GNP 17.8161
574 1D5C GDP 17.9012
575 2X77 GDP 17.9894
576 5I0H ADP BEF 18.0272
577 5Z2M GTP 18.1159
578 4Q1A UDP 18.2143
579 4Q1A 2XZ 18.2143
580 2QTV GNP 18.3673
581 3FYH ADP 18.3673
582 3WYG GTP 18.4211
583 1Z2A GDP 18.4524
584 6CRK GDP 18.7075
585 1BH2 GSP 18.7075
586 5KDO GDP 18.7075
587 1Y3A GDP 18.7075
588 1SVK ALF GDP 18.7075
589 2OM2 GDP 19.4444
590 2QQ0 ANP 19.5652
591 2QQ0 THM 19.5652
592 2QQ0 TMP 19.5652
593 2QQ0 ADP 19.5652
594 3W5J GDP 19.6078
595 2NCD ADP 19.7279
596 2WJH GDP 19.8795
597 2WJH FLC 19.8795
598 5L3V GDP 20.4082
599 5L3S GNP 20.4082
600 1IN4 ADP 20.4082
601 5L3S G 20.4082
602 5E95 GDP 21.6495
603 4J0Q GDP 22.449
604 3DEF GDP 22.9008
605 1X6V ADP 23.4694
606 4CVN ADP 24.0876
607 3U6B GDP 24.3655
608 5JBQ GDP 24.3655
609 4G5G GDP 24.3655
610 4P3Y GDP 24.3655
611 3U6K GDP 24.3655
612 4PC3 GDP 24.3655
613 1D8T GDP 24.4275
614 2BVN GNP 24.4275
615 5BQ5 ADP BEF 25.9259
616 1MKY GDP 26.5306
617 4DCT GDP 26.5306
618 2V7Q ATP 27.3973
619 2CK3 ANP 27.3973
620 2V7Q ADP 27.3973
621 2CK3 ADP 27.3973
622 5LEF GTP 27.7487
623 3E5H GNP 28.0899
624 2HCJ GDP 28.6567
625 4HDQ GNP 30.7692
626 5YT0 GDP 33.3333
627 1G7C 5GP 34.0426
628 1J2J GTP 35.5556
629 3QF7 ANP 38
630 5W76 GDP 39.4558
631 5DI9 GNP 42.8571
Pocket No.: 2; Query (leader) PDB : 6G14; Ligand: G4P; Similar sites found with APoc: 10
This union binding pocket(no: 2) in the query (biounit: 6g14.bio2) has 19 residues
No: Leader PDB Ligand Sequence Similarity
1 1YXM ADE 2.04082
2 3W5N RAM 2.72109
3 1OE0 TTP 3.04348
4 3ITJ CIT 3.06122
5 2XZ9 PYR 5.44218
6 1Z0N BCD 9.375
7 3L6C MLI 9.52381
8 6H5E ANP 9.56175
9 4C12 ADP 11.9048
10 4LIK CIT 12.9252
APoc FAQ
Feedback