Receptor
PDB id Resolution Class Description Source Keywords
6QX6 1.65 Å EC: 1.-.-.- STRUCTURE OF GTPEBB-DIHYDROBILIVERDIN COMPLEX GUILLARDIA THETA CCMP2712 PHYCOBILIN SYNTHESIS DIHYDROBILIVERDIN PHYCOERYTHROBILIN FERREDOXIN DEPENDENT BILIN REDUCTASE OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF THE FIRST EUKARYOTIC BILIN REDUCTASEGTPEBB REVEALS A FLIPPED BINDING MODE OF DIHYDROBILIVERDIN. J.BIOL.CHEM. V. 294 13889 2019
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 B:503;
B:504;
B:502;
A:503;
A:502;
 Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
 none;
none;
none;
none;
none;
 submit data
96.063 O4 S [O-]S...
DBV A:501;
B:501;
 Valid;
Valid;
 none;
none;
 submit data
584.662 C33 H36 N4 O6 Cc1c(...
1PE B:500;
 Invalid;
 none;
 submit data
238.278 C10 H22 O6 C(COC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6QX6 1.65 Å EC: 1.-.-.- STRUCTURE OF GTPEBB-DIHYDROBILIVERDIN COMPLEX GUILLARDIA THETA CCMP2712 PHYCOBILIN SYNTHESIS DIHYDROBILIVERDIN PHYCOERYTHROBILIN FERREDOXIN DEPENDENT BILIN REDUCTASE OXIDOREDUCTASE
Ref.: CRYSTAL STRUCTURE OF THE FIRST EUKARYOTIC BILIN REDUCTASEGTPEBB REVEALS A FLIPPED BINDING MODE OF DIHYDROBILIVERDIN. J.BIOL.CHEM. V. 294 13889 2019
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 383 families.
1 6QX6 - DBV C33 H36 N4 O6 Cc1c(c([nH....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 337 families.
1 6QX6 - DBV C33 H36 N4 O6 Cc1c(c([nH....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 225 families.
1 6QX6 - DBV C33 H36 N4 O6 Cc1c(c([nH....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: DBV; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 DBV 1 1
2 BL3 0.69 0.962963
3 BLA 0.62037 0.962963
4 MBV 0.42735 0.927273
Similar Ligands (3D)
Ligand no: 1; Ligand: DBV; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 6QX6; Ligand: DBV; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 6qx6.bio2) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 6QX6; Ligand: DBV; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 6qx6.bio1) has 23 residues
No: Leader PDB Ligand Sequence Similarity
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