Receptor
PDB id Resolution Class Description Source Keywords
6j8f 2.28 Å EC: 3.4.17.17 CRYSTAL STRUCTURE OF SVBP-VASH1 WITH PEPTIDE MIMIC THE C-TER ALPHA-TUBULIN HOMO SAPIENS PROTEASE COMPLEX PEPTIDE BINDING PROTEIN STRUCTURAL GENOM2 PROTEIN STRUCTURE INITIATIVE STRUCTURAL GENOMICS CONSORSGC PEPTIDE BINDING PROTEIN-HYDROLASE COMPLEX
Ref.: MOLECULAR BASIS OF VASOHIBINS-MEDIATED DETYROSINATI ITS IMPACT ON SPINDLE FUNCTION AND MITOSIS. CELL RES. V. 29 533 2019
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GLY GLU GLU GLU GLY GLU CYS TYR C:446;
 Valid;
 Atoms found LESS than expected: % Diff = 0.349;
 submit data
596.594 n/a SCC(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
6J8F 2.28 Å EC: 3.4.17.17 CRYSTAL STRUCTURE OF SVBP-VASH1 WITH PEPTIDE MIMIC THE C-TER ALPHA-TUBULIN HOMO SAPIENS PROTEASE COMPLEX PEPTIDE BINDING PROTEIN STRUCTURAL GENOM2 PROTEIN STRUCTURE INITIATIVE STRUCTURAL GENOMICS CONSORSGC PEPTIDE BINDING PROTEIN-HYDROLASE COMPLEX
Ref.: MOLECULAR BASIS OF VASOHIBINS-MEDIATED DETYROSINATI ITS IMPACT ON SPINDLE FUNCTION AND MITOSIS. CELL RES. V. 29 533 2019
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 6J8F - GLY GLU GLU GLU GLY GLU CYS TYR n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 6J8F - GLY GLU GLU GLU GLY GLU CYS TYR n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1 families.
1 6J8F - GLY GLU GLU GLU GLY GLU CYS TYR n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: GLY GLU GLU GLU GLY GLU CYS TYR; Similar ligands found: 24
No: Ligand ECFP6 Tc MDL keys Tc
1 GLY GLU GLU GLU GLY GLU CYS TYR 1 1
2 GLU GLU GLN GLU GLU TYR 0.65 0.869565
3 THR ASN GLU PHE TYR PHE 0.520833 0.8
4 PRO GLU GLY ASP PM3 GLU GLU VAL LEU 0.470085 0.661017
5 LYS LYS ALA THR GLN ALA SEP GLN GLU TYR 0.456311 0.694915
6 LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE 0.455224 0.793103
7 THR ASN GLU TYR TYR VAL 0.454545 0.754717
8 GLU ASN GLN LYS GLU TYR PHE PHE 0.45045 0.846154
9 LEU TYR LEU VAL CYS GLY GLU ARG VAL 0.442748 0.821429
10 LEU TYR LEU VAL CYS GLY GLU ARG GLY 0.438462 0.821429
11 ASP LEU TYR CYS TYR GLU GLN LEU ASN 0.428571 0.8
12 ASP SER TRP LYS ASP GLY CYS TYR 0.426471 0.779661
13 SER GLN ASN TYR 0.424242 0.823529
14 VAL TYR 0.423529 0.693878
15 TYR GLN PHE 0.42268 0.8125
16 TYR GLU TRP 0.420561 0.722222
17 PRO GLU SEP LEU GLU SER CYS PHE 0.418803 0.629032
18 GLY TYR 0.414634 0.847826
19 ASP ASP ASP ASP TYR 0.413043 0.770833
20 GLY GLY LYS LYS LYS TYR LYS LEU 0.412844 0.846154
21 ASP ASN ARG LEU GLY LEU VAL TYR GLN PHE 0.409091 0.75
22 GLY GLY LYS LYS LYS TYR GLN LEU 0.408696 0.846154
23 ALA THR ALA ALA ALA THR GLU ALA TYR 0.407407 0.784314
24 THR ASN GLU TYR LYS VAL 0.401786 0.846154
Similar Ligands (3D)
Ligand no: 1; Ligand: GLY GLU GLU GLU GLY GLU CYS TYR; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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