Receptor
PDB id Resolution Class Description Source Keywords
3ADW 2.07 Å NON-ENZYME: TRANSCRIPT_TRANSLATE HUMAN PPARGAMMA LIGAND-BINDING DOMAIN IN COMPLEX WITH 5-METH ACETATE AND 15-OXO-EICOSATETRAENOIC ACID HOMO SAPIENS NUCLEAR RECEPTOR LIGAND-DEPENDENT TRANSCRIPTION FACTOR LIGBINDING DOMAIN ACTIVATOR DIABETES MELLITUS DISEASE MUTATBINDING METAL-BINDING NUCLEUS OBESITY PHOSPHOPROTEIN RTRANSCRIPTION TRANSCRIPTION REGULATION ZINC-FINGER
Ref.: THE NUCLEAR RECEPTOR PPARGAMMA INDIVIDUALLY RESPOND SEROTONIN- AND FATTY ACID-METABOLITES EMBO J. V. 29 3395 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MYI A:3;
Valid;
none;
Kd = 72.8 uM
205.21 C11 H11 N O3 COc1c...
OCR A:1;
B:2;
Part of Protein;
Part of Protein;
none;
none;
submit data
318.45 C20 H30 O3 CCCCC...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2P4Y 2.25 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF HUMAN PPAR-GAMMA-LIGAND BINDING DOMAIN COMPLEXED WITH AN INDOLE-BASED MODULATOR HOMO SAPIENS NUCLEAR RECEPTOR LIGAND BINDING DOMAIN LBD ALPHA HELIX SANDWICH PPAR-HOMODIMER SPPARGM PARTIAL AGONIST TRANSCRIPTION
Ref.: THE DIFFERENTIAL INTERACTIONS OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGANDS WITH TYR473 IS A PHYSICAL BASIS FOR THEIR UNIQUE BIOLOGICAL ACTIVITIES. MOL.PHARMACOL. V. 73 62 2008
Members (85)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 308 families.
1 6DGL - GEV C23 H18 N2 O4 S Cc1c(nc(o1....
2 2Q61 - SF1 C22 H16 Cl N O2 S c1ccc(cc1)....
3 3AN3 - M7S C37 H43 N O4 CCCOc1ccc(....
4 6T9C - MX8 C18 H28 N2 O4 CCCCCCOc1c....
5 1ZEO ic50 = 0.21 uM C01 C25 H30 N O5 CCCc1cc2c(....
6 3R8I Kd = 4.5 uM XCX C26 H34 N2 O4 CCCCCCCN(C....
7 3ADW Kd = 72.8 uM MYI C11 H11 N O3 COc1ccc2c(....
8 4E4K - RRG C24 H24 O3 CC(C)c1ccc....
9 4XUH ic50 = 1.87 uM SFI C20 H17 F O2 S CC1=C(c2cc....
10 2POB - GW4 C36 H35 N3 O4 Cc1c(nc(o1....
11 6MD4 - BRL C18 H19 N3 O3 S CN(CCOc1cc....
12 2HWR - DRD C35 H35 N O5 CCCc1c2ccc....
13 4R2U - 3JX C33 H29 N3 O5 Cc1c(n(c2c....
14 2ZNO - S44 C32 H41 N O4 CCCOc1ccc(....
15 4XUM ic50 = 21.3 uM IMN C19 H16 Cl N O4 Cc1c(c2cc(....
16 6MD1 - OLA C18 H34 O2 CCCCCCCCC=....
17 3R5N Kd = 1.67 uM MLO C18 H18 O2 C=CCc1ccc(....
18 2HWQ - DRY C33 H31 N O5 CCCc1c2ccc....
19 6QJ5 Kd = 30.1 nM H8R C20 H31 N O4 CCCCCCCCOc....
20 3VJH - J35 C22 H24 F3 N O4 CCC[C@@H](....
21 3U9Q Ki = 41.7 uM DKA C10 H20 O2 CCCCCCCCCC....
22 2Q6R - SF2 C23 H18 Cl N O3 S COc1cccc(c....
23 2P4Y Ki = 0.001 uM C03 C28 H22 Cl F3 N2 O6 Cc1c(c2ccc....
24 5Y2O - 8N6 C19 H20 N2 O3 S CCc1ccc(nc....
25 3D6D - LRG C21 H18 O3 c1ccc(cc1)....
26 2F4B ic50 = 50 nM EHA C33 H31 N O5 CCCc1c2ccc....
27 3BC5 ic50 = 0.005 uM ZAA C29 H26 N4 O4 Cc1c(nc(o1....
28 6ZLY Kd = 94 nM QMH C18 H27 N O4 CCCCCCOc1c....
29 3VSO - EK1 C31 H31 N3 O4 CCCOc1ccc(....
30 4R06 Kd = 565 nM 3E7 C28 H24 N2 O3 S CC[C@@H](c....
31 1I7I - AZ2 C20 H24 O7 S CCO[C@@H](....
32 4R6S - 3K2 C33 H29 N3 O5 Cc1c(n(c2c....
33 3GBK - 2PQ C38 H41 N O5 CCCc1cc(cc....
34 3SZ1 - LU2 C15 H10 O6 c1cc(c(cc1....
35 2ZVT - PTG C20 H28 O3 CCCCCC=CC=....
36 2ATH ic50 = 0.152 uM 3EA C24 H23 F3 N2 O5 CCCc1c(ccc....
37 6D3E - FT7 C27 H26 F2 N2 O CC[C@H](c1....
38 4XLD - BRL C18 H19 N3 O3 S CN(CCOc1cc....
39 6C5Q ic50 = 220 nM EKS C34 H40 N2 O4 Cc1c(n(c2c....
40 2G0H ic50 = 22.7 nM SP3 C21 H12 F7 N3 O2 S2 c1cc(sc1)c....
41 2Q5P - 241 C28 H24 F3 N O6 Cc1c(c2cc(....
42 2GTK ic50 = 0.251 uM 208 C24 H23 Cl N2 O4 CCO[C@@H](....
43 4Y29 ic50 = 566 nM CTI C21 H18 N O4 C[n+]1cc2c....
44 6MD2 - ACD C20 H32 O2 CCCCCC=C/C....
45 5UGM - 8A7 C24 H20 N2 O4 S2 Cc1c(nc(o1....
46 2I4J - DRJ C27 H36 N2 O4 CCCCCCCN(C....
47 3R8A - HIG C26 H25 N7 CCc1nc2c(c....
48 4XTA ic50 = 3.7 uM DIF C14 H11 Cl2 N O2 c1ccc(c(c1....
49 3TY0 ic50 = 83.1 nM 082 C26 H20 N4 O6 C[C@]1(C(=....
50 6DGR - GDY C16 H13 N O3 S2 c1cc(sc1)C....
51 4YT1 - JJB C29 H28 N4 O5 S CCCOc1ccc(....
52 2ZK6 - C08 C22 H31 B F2 N2 O2 [B-]1(n2c(....
53 6L89 Ki = 2.64 uM E7C C24 H24 O7 CC(=CCc1cc....
54 6MCZ - ACD C20 H32 O2 CCCCCC=C/C....
55 3ADS Kd = 9.73 uM IMN C19 H16 Cl N O4 Cc1c(c2cc(....
56 3ET0 - GLC C6 H12 O6 C([C@@H]1[....
57 6MD0 - OLA C18 H34 O2 CCCCCCCCC=....
58 5Y2T - 8LX C24 H24 N4 O5 S CN(CCOc1cc....
59 4E4Q - RRH C24 H24 O3 CC(C)c1ccc....
60 1KNU - YPA C25 H25 N O4 CCO[C@@H](....
61 2Q8S ic50 = 0.185 uM L92 C26 H26 N2 O3 Cc1c(nc(o1....
62 6E5A - HV4 C13 H9 N O2 S2 C#CCOc1ccc....
63 2YFE Ki = 0.236 uM YFE C21 H24 O4 CC(=CCc1c(....
64 4EM9 - KNA C9 H18 O2 CCCCCCCCC(....
65 2Q6S - PLB C18 H11 Cl2 N3 O4 c1cnc(nc1)....
66 3AN4 - M7R C37 H43 N O4 CCCOc1ccc(....
67 3PBA - ZXG C15 H12 Br4 O5 S CC(C)(c1cc....
68 3ADV Kd = 933 uM SRO C10 H12 N2 O c1cc2c(cc1....
69 6ENQ - BJB C19 H15 Cl N2 O4 S2 c1cc2c(cc1....
70 6C1I ic50 = 85 nM EEY C12 H8 Cl N3 O3 c1cc(c(cc1....
71 2Q5S - NZA C22 H15 Cl2 N O2 S c1ccc(cc1)....
72 5F9B - 5VN C30 H48 O5 C[C@]12CC[....
73 6FZG - EDK C30 H29 N3 O4 CN(CCOc1cc....
74 2I4P - DRH C27 H36 N2 O4 CCCCCCC[N@....
75 6DHA Kd = 708 nM GFV C19 H20 N2 O4 S C[C@@H](c1....
76 6DGQ - GBV C20 H26 N2 O4 S3 c1cc(ccc1C....
77 5LSG Kd = 4 uM QZQ C30 H46 O3 CC(=C)[C@@....
78 5TTO - 7KK C21 H11 Br Cl2 F2 N2 O3 S c1ccc2c(c1....
79 5HZC - 65W C20 H18 O3 CC(C)(C(=O....
80 3IA6 ic50 = 0.003 uM UNT C24 H24 N4 O3 Cc1c(nc(o1....
81 3ADX - IMN C19 H16 Cl N O4 Cc1c(c2cc(....
82 6F2L - AXY C27 H22 O3 c1ccc(cc1)....
83 3HOD - ZZH C22 H20 O3 c1ccc(cc1)....
84 6AVI - KNA C9 H18 O2 CCCCCCCCC(....
85 2I4Z - DRH C27 H36 N2 O4 CCCCCCC[N@....
70% Homology Family (144)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 266 families.
1 6DGL - GEV C23 H18 N2 O4 S Cc1c(nc(o1....
2 2Q61 - SF1 C22 H16 Cl N O2 S c1ccc(cc1)....
3 3AN3 - M7S C37 H43 N O4 CCCOc1ccc(....
4 6T9C - MX8 C18 H28 N2 O4 CCCCCCOc1c....
5 1ZEO ic50 = 0.21 uM C01 C25 H30 N O5 CCCc1cc2c(....
6 3R8I Kd = 4.5 uM XCX C26 H34 N2 O4 CCCCCCCN(C....
7 3ADW Kd = 72.8 uM MYI C11 H11 N O3 COc1ccc2c(....
8 4E4K - RRG C24 H24 O3 CC(C)c1ccc....
9 4XUH ic50 = 1.87 uM SFI C20 H17 F O2 S CC1=C(c2cc....
10 2POB - GW4 C36 H35 N3 O4 Cc1c(nc(o1....
11 6MD4 - BRL C18 H19 N3 O3 S CN(CCOc1cc....
12 2HWR - DRD C35 H35 N O5 CCCc1c2ccc....
13 4R2U - 3JX C33 H29 N3 O5 Cc1c(n(c2c....
14 2ZNO - S44 C32 H41 N O4 CCCOc1ccc(....
15 4XUM ic50 = 21.3 uM IMN C19 H16 Cl N O4 Cc1c(c2cc(....
16 6MD1 - OLA C18 H34 O2 CCCCCCCCC=....
17 3R5N Kd = 1.67 uM MLO C18 H18 O2 C=CCc1ccc(....
18 2HWQ - DRY C33 H31 N O5 CCCc1c2ccc....
19 6QJ5 Kd = 30.1 nM H8R C20 H31 N O4 CCCCCCCCOc....
20 3VJH - J35 C22 H24 F3 N O4 CCC[C@@H](....
21 3U9Q Ki = 41.7 uM DKA C10 H20 O2 CCCCCCCCCC....
22 2Q6R - SF2 C23 H18 Cl N O3 S COc1cccc(c....
23 2P4Y Ki = 0.001 uM C03 C28 H22 Cl F3 N2 O6 Cc1c(c2ccc....
24 5Y2O - 8N6 C19 H20 N2 O3 S CCc1ccc(nc....
25 3D6D - LRG C21 H18 O3 c1ccc(cc1)....
26 2F4B ic50 = 50 nM EHA C33 H31 N O5 CCCc1c2ccc....
27 3BC5 ic50 = 0.005 uM ZAA C29 H26 N4 O4 Cc1c(nc(o1....
28 6ZLY Kd = 94 nM QMH C18 H27 N O4 CCCCCCOc1c....
29 3VSO - EK1 C31 H31 N3 O4 CCCOc1ccc(....
30 4R06 Kd = 565 nM 3E7 C28 H24 N2 O3 S CC[C@@H](c....
31 1I7I - AZ2 C20 H24 O7 S CCO[C@@H](....
32 4R6S - 3K2 C33 H29 N3 O5 Cc1c(n(c2c....
33 3GBK - 2PQ C38 H41 N O5 CCCc1cc(cc....
34 3SZ1 - LU2 C15 H10 O6 c1cc(c(cc1....
35 2ZVT - PTG C20 H28 O3 CCCCCC=CC=....
36 2ATH ic50 = 0.152 uM 3EA C24 H23 F3 N2 O5 CCCc1c(ccc....
37 6D3E - FT7 C27 H26 F2 N2 O CC[C@H](c1....
38 4XLD - BRL C18 H19 N3 O3 S CN(CCOc1cc....
39 6C5Q ic50 = 220 nM EKS C34 H40 N2 O4 Cc1c(n(c2c....
40 2G0H ic50 = 22.7 nM SP3 C21 H12 F7 N3 O2 S2 c1cc(sc1)c....
41 2Q5P - 241 C28 H24 F3 N O6 Cc1c(c2cc(....
42 2GTK ic50 = 0.251 uM 208 C24 H23 Cl N2 O4 CCO[C@@H](....
43 4Y29 ic50 = 566 nM CTI C21 H18 N O4 C[n+]1cc2c....
44 6MD2 - ACD C20 H32 O2 CCCCCC=C/C....
45 5UGM - 8A7 C24 H20 N2 O4 S2 Cc1c(nc(o1....
46 2I4J - DRJ C27 H36 N2 O4 CCCCCCCN(C....
47 3R8A - HIG C26 H25 N7 CCc1nc2c(c....
48 4XTA ic50 = 3.7 uM DIF C14 H11 Cl2 N O2 c1ccc(c(c1....
49 3TY0 ic50 = 83.1 nM 082 C26 H20 N4 O6 C[C@]1(C(=....
50 6DGR - GDY C16 H13 N O3 S2 c1cc(sc1)C....
51 4YT1 - JJB C29 H28 N4 O5 S CCCOc1ccc(....
52 2ZK6 - C08 C22 H31 B F2 N2 O2 [B-]1(n2c(....
53 6L89 Ki = 2.64 uM E7C C24 H24 O7 CC(=CCc1cc....
54 6MCZ - ACD C20 H32 O2 CCCCCC=C/C....
55 3ADS Kd = 9.73 uM IMN C19 H16 Cl N O4 Cc1c(c2cc(....
56 3ET0 - GLC C6 H12 O6 C([C@@H]1[....
57 6MD0 - OLA C18 H34 O2 CCCCCCCCC=....
58 5Y2T - 8LX C24 H24 N4 O5 S CN(CCOc1cc....
59 4E4Q - RRH C24 H24 O3 CC(C)c1ccc....
60 1KNU - YPA C25 H25 N O4 CCO[C@@H](....
61 2Q8S ic50 = 0.185 uM L92 C26 H26 N2 O3 Cc1c(nc(o1....
62 6E5A - HV4 C13 H9 N O2 S2 C#CCOc1ccc....
63 2YFE Ki = 0.236 uM YFE C21 H24 O4 CC(=CCc1c(....
64 4EM9 - KNA C9 H18 O2 CCCCCCCCC(....
65 2Q6S - PLB C18 H11 Cl2 N3 O4 c1cnc(nc1)....
66 3AN4 - M7R C37 H43 N O4 CCCOc1ccc(....
67 3PBA - ZXG C15 H12 Br4 O5 S CC(C)(c1cc....
68 3ADV Kd = 933 uM SRO C10 H12 N2 O c1cc2c(cc1....
69 6ENQ - BJB C19 H15 Cl N2 O4 S2 c1cc2c(cc1....
70 6C1I ic50 = 85 nM EEY C12 H8 Cl N3 O3 c1cc(c(cc1....
71 2Q5S - NZA C22 H15 Cl2 N O2 S c1ccc(cc1)....
72 5F9B - 5VN C30 H48 O5 C[C@]12CC[....
73 6FZG - EDK C30 H29 N3 O4 CN(CCOc1cc....
74 2I4P - DRH C27 H36 N2 O4 CCCCCCC[N@....
75 6DHA Kd = 708 nM GFV C19 H20 N2 O4 S C[C@@H](c1....
76 6DGQ - GBV C20 H26 N2 O4 S3 c1cc(ccc1C....
77 5LSG Kd = 4 uM QZQ C30 H46 O3 CC(=C)[C@@....
78 5TTO - 7KK C21 H11 Br Cl2 F2 N2 O3 S c1ccc2c(c1....
79 5HZC - 65W C20 H18 O3 CC(C)(C(=O....
80 3IA6 ic50 = 0.003 uM UNT C24 H24 N4 O3 Cc1c(nc(o1....
81 3ADX - IMN C19 H16 Cl N O4 Cc1c(c2cc(....
82 6F2L - AXY C27 H22 O3 c1ccc(cc1)....
83 3HOD - ZZH C22 H20 O3 c1ccc(cc1)....
84 6AVI - KNA C9 H18 O2 CCCCCCCCC(....
85 2I4Z - DRH C27 H36 N2 O4 CCCCCCC[N@....
86 2AWH - VCA C18 H34 O2 CCCCCCC=CC....
87 5U3Y - 7U7 C27 H29 N O5 c1ccc(c(c1....
88 5U3T - 7UY C27 H31 N O4 S CC(C)N(Cc1....
89 5U3X - 7U4 C28 H30 N2 O4 c1ccc(c(c1....
90 2BAW - VCA C18 H34 O2 CCCCCCC=CC....
91 5U3Z - 7UA C27 H29 N O5 c1ccc(c(c1....
92 5U3Q - 7UJ C29 H33 N O4 CC(C)N(Cc1....
93 5U45 - 7SY C29 H30 F N O4 c1ccc(c(c1....
94 3SP9 - IL2 C22 H32 O4 CC#CC[C@@H....
95 3GWX ic50 = 4 uM EPA C20 H30 O2 CCC=C/CC=C....
96 5U3V - 7TY C29 H33 N O5 c1ccc(c(c1....
97 2XYJ - WLM C21 H23 Cl N4 O4 S2 CC(C)c1nnc....
98 5U3S - 7V4 C27 H31 N O5 CC(C)N(Cc1....
99 5U3W - 7U1 C29 H31 N O4 c1ccc(cc1)....
100 5U40 - 7UD C31 H31 N O5 c1ccc(cc1)....
101 1GWX - 433 C28 H28 Cl3 F N2 O4 CC(C)(C(=O....
102 5XMX - 89L C26 H27 N O5 C/C(=CCOc1....
103 5U44 - 7SV C29 H30 F N O4 c1ccc(c(c1....
104 3TKM Kd = 22 nM GW0 C21 H17 F4 N O3 S2 Cc1cc(ccc1....
105 5U41 - 7UG C31 H31 N O4 S c1ccc(cc1)....
106 5U42 - 7SM C30 H33 N O5 COc1cccc(c....
107 5U3U - 7TV C29 H33 N O5 c1ccc(c(c1....
108 3GZ9 Ki = 0.004 uM D32 C27 H23 F3 O5 S Cc1c(c(ccc....
109 5U46 - 7T1 C21 H18 F3 N O3 S2 Cc1cc(ccc1....
110 5ZXI - 9LU C27 H28 N2 O4 Cc1cnc(n1C....
111 5U3R - 7V1 C27 H31 N O5 CC(C)N(Cc1....
112 3ET2 - ET1 C19 H19 N O6 S COc1ccc(cc....
113 5U43 - 7SS C30 H33 N O5 COc1ccc(cc....
114 2B50 - VCA C18 H34 O2 CCCCCCC=CC....
115 3PEQ ic50 = 31.6 nM 3EQ C30 H31 N O5 S2 CCCC[N@@](....
116 6LX5 - C5F C13 H14 Cl2 O3 CC(C)(C(=O....
117 4BCR - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
118 6LX8 - OLA C18 H34 O2 CCCCCCCCC=....
119 6KB4 - P7F C28 H30 N2 O6 CC[C@H](C(....
120 6LX6 - PLM C16 H32 O2 CCCCCCCCCC....
121 6KB0 - ITY C20 H24 O2 CCCCCC#CCC....
122 6LXC - EWR C25 H29 N O4 S CCO[C@@H](....
123 6LXA - EPA C20 H30 O2 CCC=C/CC=C....
124 6KB2 - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
125 6KAZ - P7F C28 H30 N2 O6 CC[C@H](C(....
126 6KBA - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
127 1I7G ic50 = 1 uM AZ2 C20 H24 O7 S CCO[C@@H](....
128 6KB5 - ITY C20 H24 O2 CCCCCC#CCC....
129 3KDU ic50 = 347 nM NKS C28 H25 Cl N2 O6 Cc1ccc(cc1....
130 6KB1 - T4T C16 H32 O2 S CCCCCCCCCC....
131 6LX4 - F5A C17 H15 Cl O4 CC(C)(C(=O....
132 6KB8 - 2VN C29 H46 N2 O3 S CC(C)(C(=O....
133 6KAX - PLM C16 H32 O2 CCCCCCCCCC....
134 6LXB - EWR C25 H29 N O4 S CCO[C@@H](....
135 3VI8 - 13M C30 H27 N O4 CC[C@@H](C....
136 6KB7 - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
137 6KB3 - 2VN C29 H46 N2 O3 S CC(C)(C(=O....
138 6LX7 - STE C18 H36 O2 CCCCCCCCCC....
139 6KAY - 2VN C29 H46 N2 O3 S CC(C)(C(=O....
140 6KB6 - T4T C16 H32 O2 S CCCCCCCCCC....
141 2ZNN - S44 C32 H41 N O4 CCCOc1ccc(....
142 6LX9 - ACD C20 H32 O2 CCCCCC=C/C....
143 5HYK - 65W C20 H18 O3 CC(C)(C(=O....
144 6KB9 - P7F C28 H30 N2 O6 CC[C@H](C(....
50% Homology Family (165)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 220 families.
1 6DGL - GEV C23 H18 N2 O4 S Cc1c(nc(o1....
2 2Q61 - SF1 C22 H16 Cl N O2 S c1ccc(cc1)....
3 3AN3 - M7S C37 H43 N O4 CCCOc1ccc(....
4 6T9C - MX8 C18 H28 N2 O4 CCCCCCOc1c....
5 1ZEO ic50 = 0.21 uM C01 C25 H30 N O5 CCCc1cc2c(....
6 3R8I Kd = 4.5 uM XCX C26 H34 N2 O4 CCCCCCCN(C....
7 3ADW Kd = 72.8 uM MYI C11 H11 N O3 COc1ccc2c(....
8 4E4K - RRG C24 H24 O3 CC(C)c1ccc....
9 4XUH ic50 = 1.87 uM SFI C20 H17 F O2 S CC1=C(c2cc....
10 2POB - GW4 C36 H35 N3 O4 Cc1c(nc(o1....
11 6MD4 - BRL C18 H19 N3 O3 S CN(CCOc1cc....
12 2HWR - DRD C35 H35 N O5 CCCc1c2ccc....
13 4R2U - 3JX C33 H29 N3 O5 Cc1c(n(c2c....
14 2ZNO - S44 C32 H41 N O4 CCCOc1ccc(....
15 4XUM ic50 = 21.3 uM IMN C19 H16 Cl N O4 Cc1c(c2cc(....
16 6MD1 - OLA C18 H34 O2 CCCCCCCCC=....
17 3R5N Kd = 1.67 uM MLO C18 H18 O2 C=CCc1ccc(....
18 2HWQ - DRY C33 H31 N O5 CCCc1c2ccc....
19 6QJ5 Kd = 30.1 nM H8R C20 H31 N O4 CCCCCCCCOc....
20 3VJH - J35 C22 H24 F3 N O4 CCC[C@@H](....
21 3U9Q Ki = 41.7 uM DKA C10 H20 O2 CCCCCCCCCC....
22 2Q6R - SF2 C23 H18 Cl N O3 S COc1cccc(c....
23 2P4Y Ki = 0.001 uM C03 C28 H22 Cl F3 N2 O6 Cc1c(c2ccc....
24 5Y2O - 8N6 C19 H20 N2 O3 S CCc1ccc(nc....
25 3D6D - LRG C21 H18 O3 c1ccc(cc1)....
26 2F4B ic50 = 50 nM EHA C33 H31 N O5 CCCc1c2ccc....
27 3BC5 ic50 = 0.005 uM ZAA C29 H26 N4 O4 Cc1c(nc(o1....
28 6ZLY Kd = 94 nM QMH C18 H27 N O4 CCCCCCOc1c....
29 3VSO - EK1 C31 H31 N3 O4 CCCOc1ccc(....
30 4R06 Kd = 565 nM 3E7 C28 H24 N2 O3 S CC[C@@H](c....
31 1I7I - AZ2 C20 H24 O7 S CCO[C@@H](....
32 4R6S - 3K2 C33 H29 N3 O5 Cc1c(n(c2c....
33 3GBK - 2PQ C38 H41 N O5 CCCc1cc(cc....
34 3SZ1 - LU2 C15 H10 O6 c1cc(c(cc1....
35 2ZVT - PTG C20 H28 O3 CCCCCC=CC=....
36 2ATH ic50 = 0.152 uM 3EA C24 H23 F3 N2 O5 CCCc1c(ccc....
37 6D3E - FT7 C27 H26 F2 N2 O CC[C@H](c1....
38 4XLD - BRL C18 H19 N3 O3 S CN(CCOc1cc....
39 6C5Q ic50 = 220 nM EKS C34 H40 N2 O4 Cc1c(n(c2c....
40 2G0H ic50 = 22.7 nM SP3 C21 H12 F7 N3 O2 S2 c1cc(sc1)c....
41 2Q5P - 241 C28 H24 F3 N O6 Cc1c(c2cc(....
42 2GTK ic50 = 0.251 uM 208 C24 H23 Cl N2 O4 CCO[C@@H](....
43 4Y29 ic50 = 566 nM CTI C21 H18 N O4 C[n+]1cc2c....
44 6MD2 - ACD C20 H32 O2 CCCCCC=C/C....
45 5UGM - 8A7 C24 H20 N2 O4 S2 Cc1c(nc(o1....
46 2I4J - DRJ C27 H36 N2 O4 CCCCCCCN(C....
47 3R8A - HIG C26 H25 N7 CCc1nc2c(c....
48 4XTA ic50 = 3.7 uM DIF C14 H11 Cl2 N O2 c1ccc(c(c1....
49 3TY0 ic50 = 83.1 nM 082 C26 H20 N4 O6 C[C@]1(C(=....
50 6DGR - GDY C16 H13 N O3 S2 c1cc(sc1)C....
51 4YT1 - JJB C29 H28 N4 O5 S CCCOc1ccc(....
52 2ZK6 - C08 C22 H31 B F2 N2 O2 [B-]1(n2c(....
53 6L89 Ki = 2.64 uM E7C C24 H24 O7 CC(=CCc1cc....
54 6MCZ - ACD C20 H32 O2 CCCCCC=C/C....
55 3ADS Kd = 9.73 uM IMN C19 H16 Cl N O4 Cc1c(c2cc(....
56 3ET0 - GLC C6 H12 O6 C([C@@H]1[....
57 6MD0 - OLA C18 H34 O2 CCCCCCCCC=....
58 5Y2T - 8LX C24 H24 N4 O5 S CN(CCOc1cc....
59 4E4Q - RRH C24 H24 O3 CC(C)c1ccc....
60 1KNU - YPA C25 H25 N O4 CCO[C@@H](....
61 2Q8S ic50 = 0.185 uM L92 C26 H26 N2 O3 Cc1c(nc(o1....
62 6E5A - HV4 C13 H9 N O2 S2 C#CCOc1ccc....
63 2YFE Ki = 0.236 uM YFE C21 H24 O4 CC(=CCc1c(....
64 4EM9 - KNA C9 H18 O2 CCCCCCCCC(....
65 2Q6S - PLB C18 H11 Cl2 N3 O4 c1cnc(nc1)....
66 3AN4 - M7R C37 H43 N O4 CCCOc1ccc(....
67 3PBA - ZXG C15 H12 Br4 O5 S CC(C)(c1cc....
68 3ADV Kd = 933 uM SRO C10 H12 N2 O c1cc2c(cc1....
69 6ENQ - BJB C19 H15 Cl N2 O4 S2 c1cc2c(cc1....
70 6C1I ic50 = 85 nM EEY C12 H8 Cl N3 O3 c1cc(c(cc1....
71 2Q5S - NZA C22 H15 Cl2 N O2 S c1ccc(cc1)....
72 5F9B - 5VN C30 H48 O5 C[C@]12CC[....
73 6FZG - EDK C30 H29 N3 O4 CN(CCOc1cc....
74 2I4P - DRH C27 H36 N2 O4 CCCCCCC[N@....
75 6DHA Kd = 708 nM GFV C19 H20 N2 O4 S C[C@@H](c1....
76 6DGQ - GBV C20 H26 N2 O4 S3 c1cc(ccc1C....
77 5LSG Kd = 4 uM QZQ C30 H46 O3 CC(=C)[C@@....
78 5TTO - 7KK C21 H11 Br Cl2 F2 N2 O3 S c1ccc2c(c1....
79 5HZC - 65W C20 H18 O3 CC(C)(C(=O....
80 3IA6 ic50 = 0.003 uM UNT C24 H24 N4 O3 Cc1c(nc(o1....
81 3ADX - IMN C19 H16 Cl N O4 Cc1c(c2cc(....
82 6F2L - AXY C27 H22 O3 c1ccc(cc1)....
83 3HOD - ZZH C22 H20 O3 c1ccc(cc1)....
84 6AVI - KNA C9 H18 O2 CCCCCCCCC(....
85 2I4Z - DRH C27 H36 N2 O4 CCCCCCC[N@....
86 3HZF - B72 C20 H24 O4 Cc1cc(cc(c....
87 1NAV - IH5 C17 H16 Cl2 O4 CC(C)c1cc(....
88 4LNX - T44 C15 H11 I4 N O4 c1c(cc(c(c....
89 2H77 - T3 C15 H12 I3 N O4 c1cc(c(cc1....
90 2AWH - VCA C18 H34 O2 CCCCCCC=CC....
91 5U3Y - 7U7 C27 H29 N O5 c1ccc(c(c1....
92 5U3T - 7UY C27 H31 N O4 S CC(C)N(Cc1....
93 5U3X - 7U4 C28 H30 N2 O4 c1ccc(c(c1....
94 2BAW - VCA C18 H34 O2 CCCCCCC=CC....
95 5U3Z - 7UA C27 H29 N O5 c1ccc(c(c1....
96 5U3Q - 7UJ C29 H33 N O4 CC(C)N(Cc1....
97 5U45 - 7SY C29 H30 F N O4 c1ccc(c(c1....
98 3SP9 - IL2 C22 H32 O4 CC#CC[C@@H....
99 3GWX ic50 = 4 uM EPA C20 H30 O2 CCC=C/CC=C....
100 5U3V - 7TY C29 H33 N O5 c1ccc(c(c1....
101 2XYJ - WLM C21 H23 Cl N4 O4 S2 CC(C)c1nnc....
102 5U3S - 7V4 C27 H31 N O5 CC(C)N(Cc1....
103 5U3W - 7U1 C29 H31 N O4 c1ccc(cc1)....
104 5U40 - 7UD C31 H31 N O5 c1ccc(cc1)....
105 1GWX - 433 C28 H28 Cl3 F N2 O4 CC(C)(C(=O....
106 5XMX - 89L C26 H27 N O5 C/C(=CCOc1....
107 5U44 - 7SV C29 H30 F N O4 c1ccc(c(c1....
108 3TKM Kd = 22 nM GW0 C21 H17 F4 N O3 S2 Cc1cc(ccc1....
109 5U41 - 7UG C31 H31 N O4 S c1ccc(cc1)....
110 5U42 - 7SM C30 H33 N O5 COc1cccc(c....
111 5U3U - 7TV C29 H33 N O5 c1ccc(c(c1....
112 3GZ9 Ki = 0.004 uM D32 C27 H23 F3 O5 S Cc1c(c(ccc....
113 5U46 - 7T1 C21 H18 F3 N O3 S2 Cc1cc(ccc1....
114 5ZXI - 9LU C27 H28 N2 O4 Cc1cnc(n1C....
115 5U3R - 7V1 C27 H31 N O5 CC(C)N(Cc1....
116 3ET2 - ET1 C19 H19 N O6 S COc1ccc(cc....
117 5U43 - 7SS C30 H33 N O5 COc1ccc(cc....
118 2B50 - VCA C18 H34 O2 CCCCCCC=CC....
119 3PEQ ic50 = 31.6 nM 3EQ C30 H31 N O5 S2 CCCC[N@@](....
120 6O98 - L8A C26 H26 F7 N3 O5 S CC(=O)N1CC....
121 6NWS - L77 C22 H15 Cl F4 N2 O3 S c1cc(cc(c1....
122 5UFR Kd = 0.002 uM 88J C27 H24 Cl N5 O Cn1cncc1[C....
123 5C4U ic50 = 1.9 nM 4Y7 C21 H10 Cl F4 N3 O4 c1cc(c(c(c....
124 3L0J - LYS ILE LEU HIS ARG LEU LEU GLN ASP SER n/a n/a
125 6TLM ic50 = 425 nM MJE C20 H12 Cl2 N2 O3 S Cc1cc2c(s1....
126 6E3G ic50 = 44 nM HOJ C26 H27 N3 O5 CC(=O)N1CC....
127 6LX5 - C5F C13 H14 Cl2 O3 CC(C)(C(=O....
128 4BCR - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
129 6LX8 - OLA C18 H34 O2 CCCCCCCCC=....
130 6KB4 - P7F C28 H30 N2 O6 CC[C@H](C(....
131 6LX6 - PLM C16 H32 O2 CCCCCCCCCC....
132 6KB0 - ITY C20 H24 O2 CCCCCC#CCC....
133 6LXC - EWR C25 H29 N O4 S CCO[C@@H](....
134 6LXA - EPA C20 H30 O2 CCC=C/CC=C....
135 6KB2 - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
136 6KAZ - P7F C28 H30 N2 O6 CC[C@H](C(....
137 6KBA - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
138 1I7G ic50 = 1 uM AZ2 C20 H24 O7 S CCO[C@@H](....
139 6KB5 - ITY C20 H24 O2 CCCCCC#CCC....
140 3KDU ic50 = 347 nM NKS C28 H25 Cl N2 O6 Cc1ccc(cc1....
141 6KB1 - T4T C16 H32 O2 S CCCCCCCCCC....
142 6LX4 - F5A C17 H15 Cl O4 CC(C)(C(=O....
143 6KB8 - 2VN C29 H46 N2 O3 S CC(C)(C(=O....
144 6KAX - PLM C16 H32 O2 CCCCCCCCCC....
145 6LXB - EWR C25 H29 N O4 S CCO[C@@H](....
146 3VI8 - 13M C30 H27 N O4 CC[C@@H](C....
147 6KB7 - WY1 C14 H14 Cl N3 O2 S Cc1cccc(c1....
148 6KB3 - 2VN C29 H46 N2 O3 S CC(C)(C(=O....
149 6LX7 - STE C18 H36 O2 CCCCCCCCCC....
150 6KAY - 2VN C29 H46 N2 O3 S CC(C)(C(=O....
151 6KB6 - T4T C16 H32 O2 S CCCCCCCCCC....
152 2ZNN - S44 C32 H41 N O4 CCCOc1ccc(....
153 6LX9 - ACD C20 H32 O2 CCCCCC=C/C....
154 5HYK - 65W C20 H18 O3 CC(C)(C(=O....
155 6KB9 - P7F C28 H30 N2 O6 CC[C@H](C(....
156 4X1F Kd = 10.8 nM 3WF C20 H24 O2 C[C@]12CC[....
157 5M24 - 9CR C20 H28 O2 CC1=C(C(CC....
158 1FCY Kd = 3 nM 564 C26 H26 O3 CC1(CCC(c2....
159 1XZX Kd = 0.06 nM T3 C15 H12 I3 N O4 c1cc(c(cc1....
160 3JZC ic50 ~ 1 nM 4HY C14 H9 I3 O4 c1cc(c(cc1....
161 1NQ0 - 4HY C14 H9 I3 O4 c1cc(c(cc1....
162 5GIC Kd = 330.9 nM DLC C35 H51 N O4 C[C@H]1/C(....
163 3P8X - ZYD C27 H44 O3 CC(C)(CCCC....
164 5YSY - 90L C29 H48 O4 C[C@H](CCC....
165 1XAP Kd = 2.5 nM TTB C24 H28 O2 C/C(=Cc1cc....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: MYI; Similar ligands found: 7
No: Ligand ECFP6 Tc MDL keys Tc
1 MYI 1 1
2 ET0 0.679245 0.971429
3 2SX 0.566038 0.710526
4 ML1 0.55 0.625
5 F1V 0.515625 0.6
6 IAC 0.481481 0.794118
7 2UD 0.419355 0.609756
Similar Ligands (3D)
Ligand no: 1; Ligand: MYI; Similar ligands found: 167
No: Ligand Similarity coefficient
1 BB4 0.9574
2 SRO 0.9475
3 7ZC 0.9467
4 772 0.9393
5 3N4 0.9371
6 TQU 0.9227
7 CSN 0.9205
8 NVU 0.9180
9 FXH 0.9169
10 TSR 0.9145
11 IOS 0.9135
12 MNP 0.9130
13 NLA 0.9128
14 AC2 0.9105
15 NPA 0.9085
16 XEN 0.9075
17 57O 0.9066
18 M3Q 0.9063
19 64C 0.9050
20 G1P 0.9038
21 R9G 0.9037
22 EYA 0.9029
23 MQB 0.9023
24 F52 0.9017
25 AOJ 0.9012
26 7FF 0.9003
27 EYM 0.8990
28 4VS 0.8986
29 R6T 0.8985
30 VKE 0.8943
31 0LH 0.8938
32 8GK 0.8938
33 DNC 0.8937
34 EOL 0.8932
35 IBM 0.8929
36 ZON 0.8924
37 4KL 0.8919
38 64E 0.8912
39 ARP 0.8908
40 TRP 0.8900
41 2O6 0.8898
42 4XY 0.8898
43 M5H 0.8898
44 67X 0.8897
45 5WU 0.8893
46 ONZ 0.8888
47 BK9 0.8872
48 9KH 0.8869
49 QMS 0.8868
50 S3P 0.8865
51 28S 0.8863
52 TWB 0.8856
53 EY7 0.8855
54 JAK 0.8841
55 M6Z 0.8841
56 ITW 0.8839
57 E7R 0.8838
58 EYY 0.8832
59 3EB 0.8832
60 7MX 0.8832
61 DTR 0.8825
62 61M 0.8825
63 4AV 0.8825
64 1QP 0.8824
65 AEH 0.8823
66 NBG 0.8820
67 TSS 0.8820
68 UAN 0.8819
69 N88 0.8818
70 OA1 0.8815
71 YO5 0.8812
72 LZ2 0.8810
73 774 0.8804
74 C9E 0.8803
75 MHK 0.8800
76 I6G 0.8797
77 790 0.8783
78 2K8 0.8783
79 OMD 0.8782
80 C2Y 0.8781
81 5NE 0.8779
82 H7Y 0.8775
83 N8Y 0.8774
84 9FE 0.8772
85 5NS 0.8772
86 6BL 0.8769
87 67Y 0.8769
88 APS 0.8766
89 VXX 0.8765
90 SBK 0.8762
91 2LY 0.8759
92 F12 0.8755
93 FWB 0.8754
94 IOP 0.8751
95 9BF 0.8751
96 RD4 0.8750
97 LF5 0.8747
98 7I2 0.8745
99 7CT 0.8743
100 96U 0.8743
101 PDC 0.8742
102 MS0 0.8740
103 8VN 0.8738
104 9UL 0.8737
105 MB1 0.8736
106 UFO 0.8735
107 6DP 0.8734
108 XH2 0.8732
109 GA2 0.8732
110 DNF 0.8730
111 SBI 0.8728
112 ONR 0.8725
113 1X7 0.8721
114 IPT 0.8719
115 8XL 0.8718
116 RZH 0.8716
117 5OF 0.8708
118 4OG 0.8700
119 ISJ 0.8699
120 692 0.8699
121 2ZQ 0.8697
122 I7B 0.8696
123 K68 0.8696
124 GRX 0.8694
125 I59 0.8693
126 4NO 0.8691
127 92P 0.8684
128 28N 0.8682
129 EXR 0.8678
130 KFN 0.8674
131 V55 0.8670
132 HQ9 0.8667
133 KDO 0.8667
134 OA3 0.8665
135 0FK 0.8660
136 7WR 0.8657
137 ALN 0.8656
138 HWH 0.8654
139 M0W 0.8651
140 SYY 0.8651
141 GGG 0.8649
142 8XQ 0.8637
143 MBG 0.8637
144 372 0.8636
145 QNA 0.8634
146 ICO 0.8631
147 MT8 0.8629
148 P20 0.8629
149 FLV 0.8624
150 F95 0.8624
151 HLD 0.8618
152 2FD 0.8609
153 7VS 0.8603
154 7ZE 0.8598
155 0GZ 0.8596
156 HLZ 0.8594
157 DTE 0.8588
158 DHC 0.8586
159 1AL 0.8577
160 KED 0.8575
161 HA5 0.8570
162 L98 0.8567
163 HPT 0.8557
164 MIG 0.8552
165 M0Q 0.8550
166 NQM 0.8539
167 55D 0.8526
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2P4Y; Ligand: C03; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2p4y.bio1) has 67 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 2P4Y; Ligand: C03; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 2p4y.bio1) has 60 residues
No: Leader PDB Ligand Sequence Similarity
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