Receptor
PDB id Resolution Class Description Source Keywords
6EPM 2.5 Å EC: 7.-.-.- RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR SOS1 (REM-CDC25) IN C WITH KRAS(G12C) AND FRAGMENT SCREENING HIT F1 HOMO SAPIENS GUANINE NUCLEOTIDE EXCHANGE FACTOR GEF FRAGMENT SCREEN GTSIGNALING PROTEIN
Ref.: DISCOVERY OF POTENT SOS1 INHIBITORS THAT BLOCK RAS ACTIVATION VIA DISRUPTION OF THE RAS-SOS1 INTERACTI PROC. NATL. ACAD. SCI. V. 116 2551 2019 U.S.A.
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BQ5 S:1101;
Valid;
none;
submit data
213.278 C13 H15 N3 c1ccc...
GOL R:201;
Invalid;
none;
submit data
92.094 C3 H8 O3 C(C(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5O2T 2.19 Å EC: 7.-.-.- HUMAN KRAS IN COMPLEX WITH DARPIN K27 HOMO SAPIENS KRAS RAS SIGNALLING DARPIN NUCLEOTIDE EXCHANGE SIGNALING
Ref.: STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A DAR INHIBITS RAS NUCLEOTIDE EXCHANGE. NAT COMMUN V. 8 16111 2017
Members (31)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 5WFO - 5UU C19 H16 Cl F N2 c1cc(ccc1N....
2 6T5U - MKW C25 H24 Cl N5 O2 CCC(=O)N1C....
3 5WHA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 6EPO - BPW C9 H12 Cl N c1cc(ccc1C....
5 6OB3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 6FA3 Kd = 0.038 uM D1Z C30 H36 N4 O5 CN(C)Cc1cc....
7 6WGN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 5WFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 5E95 Kd = 15.7 nM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 6FA4 Kd = 0.051 uM D1W C23 H25 N3 O3 CN(C)Cc1cc....
11 5O2T Kd = 3.9 nM GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
12 6H46 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 1WQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 3KUD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
15 6EPP - BOQ C12 H19 N O3 CCOC(=O)c1....
16 5WPM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
17 1LFD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 5WFR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 5UFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 6AMB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 6EPN - BQ2 C11 H13 N O2 c1ccc2c(c1....
22 6FA1 - D2Z C20 H25 N2 O4 C[NH+](C)C....
23 6GQX - F8K C23 H27 N2 O2 C[NH+](C)C....
24 5UFE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 6EPM - BQ5 C13 H15 N3 c1ccc(cc1)....
26 5WFP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
27 5WHB - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
28 5WPL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
29 5XCO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
30 1NVU - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
31 5WHE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (45)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 271 families.
1 5WFO - 5UU C19 H16 Cl F N2 c1cc(ccc1N....
2 6T5U - MKW C25 H24 Cl N5 O2 CCC(=O)N1C....
3 5WHA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
4 6EPO - BPW C9 H12 Cl N c1cc(ccc1C....
5 6OB3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
6 6FA3 Kd = 0.038 uM D1Z C30 H36 N4 O5 CN(C)Cc1cc....
7 6WGN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
8 5WFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 5E95 Kd = 15.7 nM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
10 6FA4 Kd = 0.051 uM D1W C23 H25 N3 O3 CN(C)Cc1cc....
11 5O2T Kd = 3.9 nM GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
12 6H46 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
13 1WQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 3KUD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
15 6EPP - BOQ C12 H19 N O3 CCOC(=O)c1....
16 5WPM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
17 1LFD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 5WFR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 5UFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 6AMB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 6EPN - BQ2 C11 H13 N O2 c1ccc2c(c1....
22 6FA1 - D2Z C20 H25 N2 O4 C[NH+](C)C....
23 6GQX - F8K C23 H27 N2 O2 C[NH+](C)C....
24 5UFE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
25 6EPM - BQ5 C13 H15 N3 c1ccc(cc1)....
26 5WFP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
27 5WHB - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
28 5WPL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
29 5XCO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
30 1NVU - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
31 5WHE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
32 3KUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
33 1C1Y - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
34 5TAR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
35 4DXA - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
36 4HDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
37 3CF6 - SP1 C10 H12 N5 O5 P S c1nc(c2c(n....
38 2C5L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
39 4K81 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
40 4KVG - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
41 3DDC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
42 1UAD Ka = 7260000 M^-1 GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
43 4URZ Kd = 3 mM VJP C11 H14 N2 O3 S c1cc(ccc1N....
44 4URX Kd = 1.3 mM HXY C11 H14 Br N c1cc(ccc1C....
45 4URY Kd = 6 mM RV1 C10 H12 N2 O3 S c1cc(ccc1N....
50% Homology Family (81)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 223 families.
1 3QBT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
2 5WFO - 5UU C19 H16 Cl F N2 c1cc(ccc1N....
3 6T5U - MKW C25 H24 Cl N5 O2 CCC(=O)N1C....
4 5WHA - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
5 6EPO - BPW C9 H12 Cl N c1cc(ccc1C....
6 6OB3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
7 6FA3 Kd = 0.038 uM D1Z C30 H36 N4 O5 CN(C)Cc1cc....
8 6WGN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
9 5WFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
10 5E95 Kd = 15.7 nM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
11 6FA4 Kd = 0.051 uM D1W C23 H25 N3 O3 CN(C)Cc1cc....
12 5O2T Kd = 3.9 nM GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
13 6H46 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
14 1WQ1 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
15 3KUD - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
16 6EPP - BOQ C12 H19 N O3 CCOC(=O)c1....
17 5WPM - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
18 1LFD - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
19 5WFR - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
20 5UFQ - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
21 6AMB - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
22 6EPN - BQ2 C11 H13 N O2 c1ccc2c(c1....
23 6FA1 - D2Z C20 H25 N2 O4 C[NH+](C)C....
24 6GQX - F8K C23 H27 N2 O2 C[NH+](C)C....
25 5UFE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
26 6EPM - BQ5 C13 H15 N3 c1ccc(cc1)....
27 5WFP - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
28 5WHB - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
29 5WPL - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
30 5XCO - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
31 1NVU - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
32 5WHE - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
33 3KUC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
34 1C1Y - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
35 5TAR - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
36 4DXA - GSP C10 H16 N5 O13 P3 S c1nc2c(n1[....
37 4HDO - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
38 3MJH - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
39 3CF6 - SP1 C10 H12 N5 O5 P S c1nc(c2c(n....
40 5JCZ - GDP BEF n/a n/a
41 1Z0K - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
42 2CJW Kd = 2.5 uM GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
43 2C5L - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
44 4K81 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
45 4KVG - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
46 3TNF - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
47 5Z2M - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
48 1ZC4 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
49 1ZC3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50 2A9K - NAD C21 H27 N7 O14 P2 c1cc(c[n+]....
51 2A78 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
52 2HV8 - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
53 4C4P - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
54 2GZD - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
55 2GZH - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
56 1VG0 Kd = 0.8 nM GER C20 H34 CC=C(/C)CC....
57 1VG9 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
58 3T5G - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
59 6RIR Kd = 3.3 uM GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
60 6IYB - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
61 3TKL - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
62 4D0G - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
63 3DDC - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
64 2EFE - GNH C10 H16 N6 O10 P2 c1nc2c(n1[....
65 4G01 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
66 2EFC - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
67 2EFH - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
68 6ZSJ Kd = 0.24 uM GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
69 6ZSI Kd = 0.29 uM GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70 5SZH - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
71 6ZRN - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
72 6ZQT - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
73 1TU3 - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
74 2D7C - GTP C10 H16 N5 O14 P3 c1nc2c(n1[....
75 1UAD Ka = 7260000 M^-1 GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
76 5O74 - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
77 4LX0 - BEF GDP n/a n/a
78 3SFV - GDP C10 H15 N5 O11 P2 c1nc2c(n1[....
79 4URZ Kd = 3 mM VJP C11 H14 N2 O3 S c1cc(ccc1N....
80 4URX Kd = 1.3 mM HXY C11 H14 Br N c1cc(ccc1C....
81 4URY Kd = 6 mM RV1 C10 H12 N2 O3 S c1cc(ccc1N....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: BQ5; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 BQ5 1 1
Similar Ligands (3D)
Ligand no: 1; Ligand: BQ5; Similar ligands found: 298
No: Ligand Similarity coefficient
1 P9I 0.9666
2 BZE 0.9621
3 W8G 0.9585
4 JR2 0.9471
5 25O 0.9414
6 692 0.9409
7 6PB 0.9405
8 M3E 0.9401
9 3B4 0.9358
10 M1Z 0.9344
11 B2T 0.9341
12 TR4 0.9340
13 QZ8 0.9319
14 XZ8 0.9304
15 ZME 0.9288
16 X11 0.9274
17 AY4 0.9266
18 6J9 0.9264
19 AJD 0.9224
20 LJ3 0.9221
21 3Y7 0.9213
22 2LX 0.9204
23 MUK 0.9196
24 LL1 0.9190
25 B4O 0.9183
26 K3Y 0.9182
27 5JT 0.9173
28 A1Y 0.9162
29 2GD 0.9130
30 8HH 0.9120
31 5E4 0.9120
32 AKD 0.9116
33 MXD 0.9113
34 ABJ 0.9111
35 X0W 0.9109
36 7ZL 0.9107
37 8WZ 0.9106
38 5P3 0.9102
39 6J3 0.9093
40 3C5 0.9089
41 977 0.9085
42 F2W 0.9084
43 V2Z 0.9080
44 TLF 0.9080
45 4F8 0.9080
46 22L 0.9077
47 9UL 0.9067
48 AYS 0.9062
49 5F8 0.9054
50 AVA 0.9051
51 XFE 0.9050
52 OCZ 0.9046
53 4FF 0.9041
54 BPY 0.9036
55 1Z8 0.9032
56 0W1 0.9032
57 ID8 0.9029
58 C8O 0.9026
59 XDK 0.9022
60 5FL 0.9022
61 JP2 0.9021
62 54X 0.9018
63 M02 0.9016
64 RKV 0.9010
65 IA2 0.9008
66 MIL 0.9002
67 DXK 0.8999
68 AB3 0.8994
69 GNV 0.8992
70 X6P 0.8989
71 VM1 0.8988
72 B21 0.8984
73 P4L 0.8982
74 0LO 0.8982
75 ONR 0.8979
76 7I2 0.8975
77 W29 0.8970
78 AUV 0.8969
79 6NZ 0.8963
80 TT4 0.8959
81 CH9 0.8958
82 PP1 0.8952
83 7M5 0.8952
84 KF5 0.8950
85 H70 0.8948
86 6KN 0.8946
87 8NX 0.8942
88 WL3 0.8939
89 MOK 0.8939
90 5F5 0.8937
91 0F9 0.8932
92 OSB 0.8932
93 WVV 0.8930
94 Q4G 0.8928
95 HJ8 0.8925
96 GZ2 0.8924
97 OKM 0.8918
98 VXX 0.8917
99 LFQ 0.8914
100 9F8 0.8912
101 A9O 0.8910
102 60L 0.8909
103 CR1 0.8906
104 L5D 0.8905
105 2D2 0.8904
106 GN6 0.8904
107 PBQ 0.8901
108 MUR 0.8899
109 M5H 0.8898
110 BBY 0.8896
111 2F6 0.8894
112 QBS 0.8893
113 7L4 0.8891
114 2JK 0.8890
115 SYR 0.8888
116 8UY 0.8888
117 MPV 0.8888
118 WOE 0.8886
119 7WR 0.8885
120 X6W 0.8885
121 PP2 0.8885
122 B23 0.8883
123 HQJ 0.8879
124 CJZ 0.8879
125 AED 0.8879
126 1X8 0.8877
127 EVO 0.8877
128 R20 0.8875
129 CFK 0.8874
130 DIF 0.8874
131 CK1 0.8864
132 AX3 0.8863
133 ZYV 0.8861
134 2D3 0.8861
135 36Z 0.8860
136 IK1 0.8858
137 43U 0.8856
138 5V7 0.8855
139 F69 0.8854
140 SG2 0.8848
141 X48 0.8848
142 TI7 0.8848
143 AH9 0.8845
144 BP7 0.8842
145 MPK 0.8839
146 28A 0.8838
147 4GU 0.8838
148 NAG 0.8838
149 F40 0.8834
150 PRZ 0.8830
151 K48 0.8827
152 O2Y 0.8822
153 9CE 0.8817
154 6XI 0.8810
155 SLY 0.8809
156 IQQ 0.8806
157 HJH 0.8805
158 TQU 0.8805
159 SOV 0.8802
160 E35 0.8801
161 89J 0.8800
162 67Y 0.8798
163 S1D 0.8791
164 BY5 0.8789
165 61M 0.8788
166 F5C 0.8787
167 N3W 0.8782
168 2KU 0.8781
169 CK2 0.8780
170 D3G 0.8779
171 AH3 0.8778
172 49N 0.8777
173 FER 0.8777
174 982 0.8774
175 C0H 0.8774
176 AVX 0.8772
177 AM1 0.8768
178 7M2 0.8767
179 KCH 0.8763
180 5I5 0.8762
181 XQK 0.8761
182 49O 0.8754
183 49P 0.8753
184 SQP 0.8753
185 5E5 0.8751
186 BP3 0.8751
187 61O 0.8751
188 LNN 0.8750
189 KP2 0.8749
190 BIE 0.8749
191 1ER 0.8748
192 NIR 0.8747
193 5OF 0.8743
194 50C 0.8741
195 PLP 0.8741
196 DBQ 0.8740
197 C9E 0.8737
198 4G2 0.8736
199 D2G 0.8734
200 AH6 0.8733
201 43S 0.8732
202 RVE 0.8730
203 6TJ 0.8728
204 NE2 0.8728
205 NCV 0.8727
206 NBG 0.8725
207 FNA 0.8724
208 9X5 0.8721
209 1XA 0.8720
210 GVG 0.8719
211 1SF 0.8717
212 URI 0.8717
213 6DP 0.8717
214 3D8 0.8715
215 1FL 0.8715
216 28B 0.8712
217 6HX 0.8712
218 TRP 0.8712
219 A9P 0.8710
220 4ME 0.8701
221 EWG 0.8699
222 FHI 0.8695
223 KOM 0.8694
224 1A7 0.8694
225 2JM 0.8687
226 ZRK 0.8686
227 N7I 0.8682
228 VBC 0.8679
229 EGR 0.8677
230 1ZC 0.8677
231 THM 0.8676
232 NE1 0.8674
233 HKK 0.8672
234 3GX 0.8672
235 1Z6 0.8671
236 SSM 0.8671
237 5AE 0.8667
238 53X 0.8664
239 R2P 0.8664
240 AQ1 0.8661
241 WLH 0.8659
242 JRB 0.8658
243 ZRL 0.8658
244 KTJ 0.8655
245 FTV 0.8654
246 QMS 0.8650
247 EXD 0.8648
248 92P 0.8646
249 MER 0.8645
250 5NN 0.8641
251 96U 0.8639
252 S2T 0.8637
253 JF6 0.8637
254 8XQ 0.8636
255 II4 0.8635
256 SXX 0.8632
257 BNL 0.8631
258 7VF 0.8629
259 20D 0.8629
260 DUR 0.8628
261 7VP 0.8623
262 SNY 0.8622
263 K80 0.8621
264 7R4 0.8621
265 HO4 0.8620
266 M4E 0.8617
267 LTN 0.8615
268 Q0K 0.8614
269 2LT 0.8605
270 JSX 0.8603
271 3DT 0.8598
272 92G 0.8593
273 NQH 0.8588
274 57D 0.8584
275 KB8 0.8580
276 1FF 0.8579
277 8VE 0.8578
278 D1G 0.8576
279 9FH 0.8575
280 CTD 0.8570
281 BCK 0.8567
282 RUY 0.8564
283 DK1 0.8564
284 5UH 0.8561
285 NGO 0.8560
286 0FR 0.8556
287 PVQ 0.8556
288 PVK 0.8547
289 BGP 0.8545
290 2TU 0.8540
291 8OB 0.8538
292 DHZ 0.8537
293 THU 0.8533
294 AMQ 0.8533
295 2B4 0.8532
296 FCD 0.8530
297 L13 0.8524
298 YO5 0.8513
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5O2T; Ligand: GSP; Similar sites found with APoc: 98
This union binding pocket(no: 1) in the query (biounit: 5o2t.bio1) has 46 residues
No: Leader PDB Ligand Sequence Similarity
1 6A8D GDP 3.74332
2 3WY9 GDP 5.32544
3 3U6B GDP 6.95187
4 4P3Y GDP 6.95187
5 2BVN GNP 6.95187
6 3U6K GDP 6.95187
7 3CNL GNP 7.10059
8 1KK1 GNP 7.69231
9 5W75 GDP 8.28402
10 5W75 GDP 8.28402
11 3EC1 GDP 8.87574
12 2WJG GDP 8.87574
13 2WJG GDP 8.87574
14 3EC1 GDP 8.87574
15 4RD0 GDP 9.46746
16 5W7Q GDP 10.0592
17 5W76 GDP 10.0592
18 3TK1 GDP 10.6509
19 2WIC GNP 10.6509
20 1SKQ GDP 11.2426
21 1SKQ GDP 11.2426
22 2C77 GNP 11.8343
23 4J0Q GDP 12.426
24 4J0Q GDP 12.426
25 4J0Q GDP 12.426
26 1FQK ALF 13.9037
27 1FQK ALF 13.9037
28 3PQC GDP 14.2012
29 4TMZ GSP 15.3846
30 4NCN GTP 15.3846
31 4TMZ GSP 15.3846
32 4NCN GTP 15.3846
33 4KAX GTP 16.568
34 6G14 G4P 16.568
35 2AWN ADP 17.1123
36 3N5C GDP 17.9012
37 3PCR GTP 17.9012
38 4LC1 GDP 18.9349
39 4LC1 GDP 18.9349
40 5CK5 GDP 20.7101
41 5CK5 GDP 20.7101
42 5CK5 GDP 20.7101
43 2FH5 GTP 24.8521
44 1NRJ GTP 24.8521
45 5FG3 GDP 25.4438
46 5H7K GDP 26.6272
47 1YRB GDP 27.8107
48 1YRB GDP 27.8107
49 5YT0 GDP 28.4024
50 4M9Q GNP 28.4024
51 4M9Q GNP 28.4024
52 2A5F GTP 28.9941
53 2J59 GTP 31.9527
54 2J59 GTP 31.9527
55 2J59 GTP 31.9527
56 1RE0 GDP 32.5444
57 5KUT GDP 33.1361
58 2QN6 GDP 33.3333
59 4DCT GDP 33.7278
60 1ZJ6 G3D 33.7278
61 1FQJ ALF 38.0952
62 1FQJ ALF 38.0952
63 3A1S GDP 38.4615
64 1FZQ GDP 39.645
65 4ZI2 GNP 39.645
66 4GOJ GNP 39.645
67 4GOJ GNP 39.645
68 5DI3 GNP 41.4201
69 5DI3 GNP 41.4201
70 6IZW GSP 41.4201
71 1M7B GTP 44.9704
72 3GJX GTP 47.3373
73 3GJ5 GDP 47.3373
74 3GJ4 GDP 47.3373
75 3GJ7 GDP 47.3373
76 3GJ5 GDP 47.3373
77 3REF GDP 47.3373
78 6X2X GNP 47.929
79 6X2R GNP 47.929
80 1IBR GNP 47.929
81 1GWN GTP 47.929
82 5BXQ GDP 47.929
83 5BXQ GDP 47.929
84 3GJ3 GDP 47.929
85 5BXQ GDP 47.929
86 3CH5 GDP 47.929
87 2EW1 GNP 48.5207
88 6FF8 GTP 48.5207
89 1NF3 GNP 49.1124
90 1NF3 GNP 49.1124
91 1NF3 GNP 49.1124
92 4DKX GDP 49.7041
93 5DI9 GNP 49.7041
94 5UWJ GNP 49.7041
95 5UWI GNP 49.7041
96 5UWR GNP 49.7041
97 5LEF GTP 49.7041
98 5LEF GTP 49.7041
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