Receptor
PDB id Resolution Class Description Source Keywords
1fk6 1.9 Å NON-ENZYME: TRANSPORT STRUCTURAL BASIS OF NON-SPECIFIC LIPID BINDING IN MAIZE LIPI PROTEIN COMPLEXES WITH ALPHA-LINOLENIC ACID REVEALED BY HIGR ESOLUTION X-RAY CRYSTALLOGRAPHY ZEA MAYS PROTEIN-LIPID COMPLEX LIPID TRANSPORT
Ref.: STRUCTURAL BASIS OF NON-SPECIFIC LIPID BINDING IN M LIPID-TRANSFER PROTEIN COMPLEXES REVEALED BY HIGH-R X-RAY CRYSTALLOGRAPHY. J.MOL.BIOL. V. 308 263 2001
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
FMT A:401;
A:403;
 Invalid;
Invalid;
 none;
none;
 submit data
46.025 C H2 O2 C(=O)...
LNL A:1201;
 Valid;
 none;
 submit data
278.43 C18 H30 O2 CCC=C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1FK5 1.3 Å NON-ENZYME: TRANSPORT STRUCTURAL BASIS OF NON-SPECIFIC LIPID BINDING IN MAIZE LIPID-TRANSFER PROTEIN COMPLEXES WITH OLEIC ACID REVEALED B Y HIGH-RESOLUTION X-RAY CRYSTALLOGRAPHY ZEA MAYS PROTEIN-LIPID COMPLEX LIPID TRANSPORT
Ref.: STRUCTURAL BASIS OF NON-SPECIFIC LIPID BINDING IN MAIZE LIPID-TRANSFER PROTEIN COMPLEXES REVEALED BY HIGH-RESOLUTION X-RAY CRYSTALLOGRAPHY. J.MOL.BIOL. V. 308 263 2001
Members (9)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 232 families.
1 1FK1 - DAO C12 H24 O2 CCCCCCCCCC....
2 1FK2 - MYR C14 H28 O2 CCCCCCCCCC....
3 1FK3 - PAM C16 H30 O2 CCCCCCC=C/....
4 1MZM - PLM C16 H32 O2 CCCCCCCCCC....
5 1FK4 - STE C18 H36 O2 CCCCCCCCCC....
6 1FK0 - DKA C10 H20 O2 CCCCCCCCCC....
7 1FK7 - RCL C18 H34 O3 CCCCCC[C@H....
8 1FK5 - OLA C18 H34 O2 CCCCCCCCC=....
9 1FK6 - LNL C18 H30 O2 CCC=CCC=CC....
70% Homology Family (16)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 197 families.
1 2B5S - HP6 C7 H16 CCCCCCC
2 2ALG - HP6 C7 H16 CCCCCCC
3 1UVB - PAM C16 H30 O2 CCCCCCC=C/....
4 1UVA - MYR C14 H28 O2 CCCCCCCCCC....
5 1UVC - STE C18 H36 O2 CCCCCCCCCC....
6 1FK1 - DAO C12 H24 O2 CCCCCCCCCC....
7 1FK2 - MYR C14 H28 O2 CCCCCCCCCC....
8 1FK3 - PAM C16 H30 O2 CCCCCCC=C/....
9 1MZM - PLM C16 H32 O2 CCCCCCCCCC....
10 1FK4 - STE C18 H36 O2 CCCCCCCCCC....
11 1FK0 - DKA C10 H20 O2 CCCCCCCCCC....
12 1FK7 - RCL C18 H34 O3 CCCCCC[C@H....
13 1FK5 - OLA C18 H34 O2 CCCCCCCCC=....
14 1FK6 - LNL C18 H30 O2 CCC=CCC=CC....
15 1BWO - LPC C22 H47 N O7 P CCCCCCCCCC....
16 1MID - LAP C20 H43 N O7 P CCCCCCCCCC....
50% Homology Family (20)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 165 families.
1 2B5S - HP6 C7 H16 CCCCCCC
2 2ALG - HP6 C7 H16 CCCCCCC
3 1UVB - PAM C16 H30 O2 CCCCCCC=C/....
4 1UVA - MYR C14 H28 O2 CCCCCCCCCC....
5 1UVC - STE C18 H36 O2 CCCCCCCCCC....
6 1FK1 - DAO C12 H24 O2 CCCCCCCCCC....
7 1FK2 - MYR C14 H28 O2 CCCCCCCCCC....
8 1FK3 - PAM C16 H30 O2 CCCCCCC=C/....
9 1MZM - PLM C16 H32 O2 CCCCCCCCCC....
10 1FK4 - STE C18 H36 O2 CCCCCCCCCC....
11 1FK0 - DKA C10 H20 O2 CCCCCCCCCC....
12 1FK7 - RCL C18 H34 O3 CCCCCC[C@H....
13 1FK5 - OLA C18 H34 O2 CCCCCCCCC=....
14 1FK6 - LNL C18 H30 O2 CCC=CCC=CC....
15 6IWP - MYR C14 H28 O2 CCCCCCCCCC....
16 5TVI - O8N C28 H58 O CCCCCCCCCC....
17 6IWN - MYR C14 H28 O2 CCCCCCCCCC....
18 6IWO - MYR C14 H28 O2 CCCCCCCCCC....
19 1BWO - LPC C22 H47 N O7 P CCCCCCCCCC....
20 1MID - LAP C20 H43 N O7 P CCCCCCCCCC....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: LNL; Similar ligands found: 36
No: Ligand ECFP6 Tc MDL keys Tc
1 LNL 1 1
2 EIC 0.767442 0.913043
3 EPA 0.697674 0.952381
4 MYZ 0.627907 0.826087
5 NER 0.613636 0.869565
6 PAM 0.613636 0.869565
7 ELA 0.613636 0.869565
8 VCA 0.613636 0.869565
9 OLA 0.613636 0.869565
10 HXA 0.590909 0.857143
11 ACD 0.574468 0.913043
12 10Y 0.574074 0.724138
13 10X 0.574074 0.724138
14 ODT 0.54 0.952381
15 ODD 0.510204 0.913043
16 RCL 0.465517 0.769231
17 T25 0.459016 0.677419
18 T24 0.459016 0.875
19 LM8 0.442623 0.875
20 MYR 0.44186 0.826087
21 EW8 0.44186 0.826087
22 DAO 0.44186 0.826087
23 DCR 0.44186 0.826087
24 F23 0.44186 0.826087
25 TDA 0.44186 0.826087
26 X90 0.44186 0.826087
27 STE 0.44186 0.826087
28 DKA 0.44186 0.826087
29 PLM 0.44186 0.826087
30 F15 0.44186 0.826087
31 11A 0.44186 0.826087
32 KNA 0.44186 0.826087
33 AZ1 0.435897 0.708333
34 OCR 0.419355 0.807692
35 OCA 0.418605 0.826087
36 243 0.409836 0.807692
Similar Ligands (3D)
Ligand no: 1; Ligand: LNL; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1FK5; Ligand: OLA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1fk5.bio1) has 24 residues
No: Leader PDB Ligand Sequence Similarity
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