Receptor
PDB id Resolution Class Description Source Keywords
2wok 1.7 Å NON-ENZYME: BINDING CLAVULANIC ACID BIOSYNTHESIS OLIGOPEPTIDE BINDING PROTEIN 2 WITH BRADYKININ STREPTOMYCES CLAVULIGERUS PEPTIDE BINDING PROTEIN-PEPTIDE COMPLEX SOLUTE-BINDING PROTCLAVULANIC ACID BIOSYNTHESIS OLIGOPEPTIDE BINDING PROTEINOLIGOPEPTIDE BRADYKININ
Ref.: CRYSTAL STRUCTURES OF AN OLIGOPEPTIDE-BINDING PROTE THE BIOSYNTHETIC PATHWAY OF THE BETA-LACTAMASE INHI CLAVULANIC ACID. J. MOL. BIOL. V. 396 332 2010
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ARG PRO PRO GLY PHE SER PRO PHE ARG B:1;
 Valid;
 none;
 submit data
717.897 n/a O=C(N...
GOL A:1561;
A:1562;
 Invalid;
Invalid;
 none;
none;
 submit data
92.094 C3 H8 O3 C(C(C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2WOK 1.7 Å NON-ENZYME: BINDING CLAVULANIC ACID BIOSYNTHESIS OLIGOPEPTIDE BINDING PROTEIN 2 WITH BRADYKININ STREPTOMYCES CLAVULIGERUS PEPTIDE BINDING PROTEIN-PEPTIDE COMPLEX SOLUTE-BINDING PROTCLAVULANIC ACID BIOSYNTHESIS OLIGOPEPTIDE BINDING PROTEINOLIGOPEPTIDE BRADYKININ
Ref.: CRYSTAL STRUCTURES OF AN OLIGOPEPTIDE-BINDING PROTE THE BIOSYNTHETIC PATHWAY OF THE BETA-LACTAMASE INHI CLAVULANIC ACID. J. MOL. BIOL. V. 396 332 2010
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 2WOK - ARG PRO PRO GLY PHE SER PRO PHE ARG n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 2WOK - ARG PRO PRO GLY PHE SER PRO PHE ARG n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 2WOK - ARG PRO PRO GLY PHE SER PRO PHE ARG n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: ARG PRO PRO GLY PHE SER PRO PHE ARG; Similar ligands found: 36
No: Ligand ECFP6 Tc MDL keys Tc
1 ARG PRO PRO GLY PHE 1 1
2 ARG PRO PRO GLY PHE SER PRO PHE ARG 1 1
3 ARG PRO PRO GLY PHE SER PRO PHE ALA 0.651163 0.876923
4 PHE PRO ARG 0.559633 0.912281
5 ARG PRO GLY ASN PHE LEU GLN SER ARG LEU 0.516556 0.823529
6 ARG PRO PRO LYS PRO ARG PRO ARG 0.516393 0.929825
7 ARG PRO PRO ILE PHE ILE ARG ARG LEU 0.510791 0.875
8 DPN PRO ARG 0.504425 0.881356
9 ARG PRO GLY ASN PHE LEU GLN SER ARG PRO 0.48 0.811594
10 DPN PRO DAR CYS NH2 0.479339 0.898305
11 DPN PRO DAR DTH NH2 0.456 0.828125
12 DPN PRO DAR ILE NH2 0.456 0.868852
13 01B PRO PRO ALA NH2 0.451327 0.765625
14 ILE ARG ALA ALA PRO PRO PRO LEU PHE 0.448276 0.861538
15 VAL PRO PRO PRO ARG PRO PRO PRO PRO GLU 0.444444 0.885246
16 0G6 0.436975 0.870968
17 ACE PRO PRO PRO VAL PRO PRO ARG ARG ARG 0.434426 0.854839
18 ARG SEP PRO VAL PHE SER 0.431507 0.760563
19 ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 0.43038 0.823529
20 ACE PRO ALA PRO PHE ALA ALA ALA ALA NH2 0.429825 0.754098
21 PHE ASN ARG PRO VAL 0.425373 0.830769
22 ILE GLY PRO GLY ARG ALA PHE TYR ALA 0.424837 0.797101
23 ARG PRO MET THR PHE LYS GLY ALA LEU 0.423313 0.753425
24 GLU PRO GLY GLY SER ARG 0.418605 0.828125
25 GLY PHE ARG PRO 0.418033 0.915254
26 ACE GLY PHE GLY VAL VAL PRO SER PHE TYR 0.416058 0.691176
27 ALA PRO PRO PRO ARG PRO PRO LYS PRO 0.407692 0.898305
28 ASN TYR THR PRO GLY PRO GLY THR ARG PHE 0.407407 0.802817
29 ILE GLY PRO GLY ARG ALA PHE TYR THR 0.405063 0.785714
30 ILE GLY PRO GLY ARG ALA PHE TYR VAL 0.405063 0.785714
31 MAA LYS PRO PHE 0.404762 0.8
32 PRO ALA PRO PHE PRO ALA NH2 0.403361 0.830508
33 ARG ILE PRO SER TYR ARG TYR ARG TYR 0.402778 0.777778
34 ARG GLY PRO GLY CYS ALA PHE VAL THR ILE 0.401235 0.785714
35 ASP LEU PRO PHE 0.4 0.734375
36 ASN TYR THR PRO GLY PRO GLY ILE ARG PHE 0.4 0.780822
Similar Ligands (3D)
Ligand no: 1; Ligand: ARG PRO PRO GLY PHE SER PRO PHE ARG; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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