Receptor
PDB id Resolution Class Description Source Keywords
4EXO 1.9 Å NON-ENZYME: OTHER REVISED, REREFINED CRYSTAL STRUCTURE OF PDB ENTRY 2QHK, METH ACCEPTING CHEMOTAXIS PROTEIN VIBRIO PARAHAEMOLYTICUS SIGNALING PROTEIN CHEMOTAXIS RECEPTOR PAS DOMAIN FOUR HELBUNDLE METHYL ACCEPTING CHEMOTAXIS RECEPTOR PERIPLASMIC D
Ref.: STRUCTURE AND PROPOSED MECHANISM FOR THE PH-SENSING HELICOBACTER PYLORI CHEMORECEPTOR TLPB. STRUCTURE V. 20 1177 2012
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PYR A:201;
Valid;
none;
submit data
88.062 C3 H4 O3 CC(=O...
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90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
4EXO 1.9 Å NON-ENZYME: OTHER REVISED, REREFINED CRYSTAL STRUCTURE OF PDB ENTRY 2QHK, METH ACCEPTING CHEMOTAXIS PROTEIN VIBRIO PARAHAEMOLYTICUS SIGNALING PROTEIN CHEMOTAXIS RECEPTOR PAS DOMAIN FOUR HELBUNDLE METHYL ACCEPTING CHEMOTAXIS RECEPTOR PERIPLASMIC D
Ref.: STRUCTURE AND PROPOSED MECHANISM FOR THE PH-SENSING HELICOBACTER PYLORI CHEMORECEPTOR TLPB. STRUCTURE V. 20 1177 2012
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1443 families.
1 4EXO - PYR C3 H4 O3 CC(=O)C(=O....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1205 families.
1 4EXO - PYR C3 H4 O3 CC(=O)C(=O....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1039 families.
1 4EXO - PYR C3 H4 O3 CC(=O)C(=O....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PYR; Similar ligands found: 7
No: Ligand ECFP6 Tc MDL keys Tc
1 PYR 1 1
2 ACY 0.636364 0.636364
3 OXD 0.545455 0.642857
4 F50 0.428571 0.6
5 2KT 0.411765 0.733333
6 AAE 0.411765 0.625
7 KIV 0.411765 0.785714
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 4EXO; Ligand: PYR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 4exo.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 4EXO; Ligand: PYR; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 4exo.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
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