Receptor
PDB id Resolution Class Description Source Keywords
5H2D 1.6 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF OSH1 ORD DOMAIN IN COMPLEX WITH ERGOSTE KLUYVEROMYCES LACTIS OXYSTEROL BINDING LIPID TRANSFER ERGOSTEROL LIPID BINDING
Ref.: STRUCTURE OF YEAST OSBP-RELATED PROTEIN OSH1 REVEAL DETERMINANTS FOR LIPID TRANSPORT AND PROTEIN TARGET THE NUCLEUS-VACUOLE JUNCTION STRUCTURE V. 25 617 2017
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:1304;
A:1303;
A:1302;
A:1305;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
ERG A:1301;
Valid;
none;
submit data
396.648 C28 H44 O CC(C)...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
5H2D 1.6 Å NON-ENZYME: OTHER CRYSTAL STRUCTURE OF OSH1 ORD DOMAIN IN COMPLEX WITH ERGOSTE KLUYVEROMYCES LACTIS OXYSTEROL BINDING LIPID TRANSFER ERGOSTEROL LIPID BINDING
Ref.: STRUCTURE OF YEAST OSBP-RELATED PROTEIN OSH1 REVEAL DETERMINANTS FOR LIPID TRANSPORT AND PROTEIN TARGET THE NUCLEUS-VACUOLE JUNCTION STRUCTURE V. 25 617 2017
Members (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1256 families.
1 5WVR - CLR C27 H46 O CC(C)CCC[C....
2 5H2D - ERG C28 H44 O CC(C)[C@@H....
70% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 1068 families.
1 5WVR - CLR C27 H46 O CC(C)CCC[C....
2 5H2D - ERG C28 H44 O CC(C)[C@@H....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 922 families.
1 5WVR - CLR C27 H46 O CC(C)CCC[C....
2 5H2D - ERG C28 H44 O CC(C)[C@@H....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ERG; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 ERG 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 5H2D; Ligand: ERG; Similar sites found: 62
This union binding pocket(no: 1) in the query (biounit: 5h2d.bio1) has 24 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4FFG LBS 0.006417 0.41631 1.14943
2 5LXB 7A9 0.02865 0.40097 1.65289
3 3RGA LSB 0.01309 0.40012 1.76678
4 3AVR OGA 0.01266 0.42142 1.83908
5 4AZT LY2 0.01252 0.41231 1.83908
6 5FQK 6NT 0.01962 0.41221 1.85874
7 3ML5 AZM 0.02634 0.40505 2.23048
8 5X7Q GLC GLC GLC GLC GLC 0.01357 0.42325 2.29885
9 5X7Q GLC GLC GLC GLC 0.02281 0.41065 2.29885
10 4NOS ITU 0.01796 0.40862 2.57611
11 4L4J NAG NAG BMA MAN NAG 0.0147 0.40462 2.71493
12 5NFB 8VT 0.02468 0.40446 2.84091
13 5CGE 51F 0.02654 0.40411 2.88809
14 4KYS VIB 0.02879 0.40226 3.0445
15 5T9C G3P 0.03097 0.40197 3.35821
16 1QFT HSM 0.008252 0.40575 3.42857
17 4OCT AKG 0.01864 0.40378 3.6036
18 5EY0 ILE 0.01479 0.41887 3.64964
19 2AGC DAO 0.01667 0.41026 3.7037
20 1SN0 T44 0.0177 0.40108 3.84615
21 3AB4 THR 0.01854 0.40792 3.93258
22 2DTJ THR 0.02154 0.40067 3.93258
23 3TAO PGH 0.009635 0.4179 4.11985
24 4WVW SLT 0.006044 0.43611 4.16667
25 4QPW XYP XYP XYP 0.01037 0.41832 4.22535
26 2I74 MAN MAN MAN MAN 0.0335 0.40077 4.2328
27 3SAO NKN 0.01928 0.40305 4.375
28 1N5S ADL 0.004956 0.41944 4.46429
29 4K90 MLA 0.03754 0.40154 4.65116
30 1TRD PGH 0.01326 0.40711 4.8
31 3FW9 SLX 0.00811 0.4027 4.84848
32 1CKN GTP 0.02428 0.40197 4.84848
33 5O0X FAD 0.01286 0.41172 5.15464
34 5T7I LAT NAG GAL 0.02518 0.40737 5.16129
35 5DG2 GAL GLC 0.01223 0.41152 5.92593
36 3ZO7 K6H 0.00733 0.42827 6.38298
37 1BRW URA 0.02151 0.41087 6.46651
38 4XBT FLC 0.005814 0.42017 7.09677
39 4XBT 3ZQ 0.01038 0.40129 7.09677
40 3UVD MB3 0.01168 0.41227 7.25806
41 1OI6 TMP 0.0182 0.41085 7.31707
42 1J3R 6PG 0.009261 0.41875 7.89474
43 4QM9 CYS 0.02264 0.40481 8.09249
44 1W6P NDG GAL 0.03193 0.41325 8.20895
45 1GZW GAL BGC 0.04047 0.4062 8.20895
46 2QL9 CIT 0.01434 0.42139 8.24742
47 1SLT NDG GAL 0.02693 0.40509 8.95522
48 2D6M LBT 0.00464 0.436 9.43396
49 5AIG VPR 0.01087 0.41532 9.6
50 3HQR OGA 0.01095 0.4111 10.1626
51 5VNF VAL THR SER VAL VAL 0.02136 0.4048 10.1911
52 1Y0G 8PP 0.01464 0.40424 10.4712
53 3WV6 GAL BGC 0.004627 0.43527 10.473
54 3WV6 GAL GLC 0.01508 0.41931 10.473
55 1A78 TDG 0.02309 0.40871 11.9403
56 3WG3 A2G GAL NAG FUC 0.01397 0.42131 12.3596
57 2YIP YIO 0.02784 0.40438 14.4928
58 1DZK PRZ 0.0133 0.40333 14.6497
59 3DZ6 PUT 0.01574 0.4009 14.9254
60 3M3E GAL A2G NPO 0.01934 0.41087 26.087
61 1ZHX HC3 0.0001706 0.44771 29.4253
62 4B2Z P5S 0.00002955 0.41946 38.6207
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